MeanVarVis
Class: maltcms.commands.fragments2d.preprocessing.MeanVarVis
Workflow Slot: VISUALIZATION
Description: Visualization of mean, variance, standard deviation and more.
Variables
Required
var.mean_ms_intensity var.var_ms_intensity var.sd_ms_intensity var.v_total_intensity_1d var.meanms_1d_horizontal_index var.meanms_1d_horizontal var.meanms_1d_vertical_index var.meanms_1d_vertical var.maxms_1d_horizontal_index var.maxms_1d_horizontal var.used_mass_values var.maxms_1d_vertical_index var.maxms_1d_vertical var.total_intensity_1d var.scan_acquisition_time_1d
Optional
Provided
Configurable Properties
Name: colorramp
Default Value: res/colorRamps/bcgyr.csv
Description:
The color ramp location.
Name: thresholdLow
Default Value: 0
Description:
Minimum intensity to be included in images.
Name: differentVisualizations
Default Value: false
Description:
If true, will create additional visualizations.
Name: useLogScale
Default Value: false
Description:
If true, will use a log scale for plotting of intensities.
Name: filetype
Default Value: png
Description:
The file format to use for saving plots.