SeededRegionGrowing

Variables

var.total_intensity
var.scan_rate
var.modulation_time
var.second_column_scan_index
var.first_column_elution_time
var.second_column_elution_time

var.v_total_intensity
var.tic_peaks

var.peak_index_list
var.region_index_list
var.region_peak_index
var.boundary_index_list
var.boundary_peak_index
var.peak_mass_intensity

Configurable Properties

Name: colorramp
Default Value: res/colorRamps/bcgyr.csv
Description:
The location of the color ramp to use

Name: thresholdLow
Default Value: 0
Description:
The minimum intensity value to include in images.

Name: doIntegration
Default Value: false
Description:
If true,peaks will be integrated.

Name: doNormalization
Default Value: false
Description:
Deprecated.

Name: integration
Default Value: null
Description:
The peak integration implementation to use.

Name: peakExporter
Default Value: null
Description:
The peak exporter implementation to use.

Name: peakPicking
Default Value: null
Description:
The peak picking implementation to use. Use SimplePeakPicking for standalone operation, or TicPeakPicking, if another peak finder, such as CWTPeakFinder has already detected peaks.

Name: peakSeparator
Default Value: PeakSeparator(minDist=0.995, separationSimilarity=null, similarity=null, useMeanMsForSeparation=false, rt1=null, rt2=null)
Description:
The peak separator implementation to use.

Name: regionGrowing
Default Value: null
Description:
The region growing implementation to use.

Name: separate
Default Value: true
Description:

Name: filetype
Default Value: png
Description:
The format for saved plots.

Name: fillValueDouble
Default Value: 9.9692099683868690e+36d
Description: