MeanVarProducer
Class: maltcms.commands.fragments2d.preprocessing.MeanVarProducer
Workflow Slot: GENERAL_PREPROCESSING
Description: Produces mean and variance of a chromatogram
Variables
Required
var.modulation_time var.scan_rate
Optional
Provided
var.mean_ms_intensity var.var_ms_intensity var.sd_ms_intensity var.v_total_intensity var.v_total_intensity_1d var.meanms_1d_horizontal_index var.meanms_1d_horizontal var.meanms_1d_vertical_index var.meanms_1d_vertical var.maxms_1d_horizontal_index var.maxms_1d_horizontal var.used_mass_values var.maxms_1d_vertical_index var.maxms_1d_vertical
Configurable Properties
Name: massResolution
Default Value: 1.0
Description:
Mass resolution to use for generation of profile EICs. 1.0 means nominal mass accuracy. 10.0 results in ten times higher resolution, up to the first decimal point. High values may significantly increase both memory usage and runtime.
Name: minStandardDeviation
Default Value: -1.0d
Description:
The minimum standard deviation of the intensity values to use. This fixed value is used,if “minStandardDeviationQuantil” is 0.
Name: minStandardDeviationQuantil
Default Value: 0.01d
Description:
The quantile of the minimum standard deviation of the intensity values to use. If value is > 0, the given quantile will be used to calculate the minimumstandard deviation.