ProgressiveTreeAlignment
Class: maltcms.commands.fragments.alignment.ProgressiveTreeAlignment
Workflow Slot: ALIGNMENT
Description: Creates a multiple alignment by following a guide tree, based on pairwise simlarities or distances. Creates meta-chromatogram as root of the tree and realigns all other chromatograms to that reference.
Variables
Required
var.pairwise_distance_matrix
Optional
Provided
Configurable Properties
Name: guideTreeClass
Default Value: maltcms.commands.fragments.cluster.UPGMAAlgorithm
Description: