Table 1. Metadata

format-version

1.2

data-version

release/2019-10-28

ontology

xlmod

date

23:03:2021 20:08

saved-by

Paul Thomas

auto-generated-by

OBO-Edit 2.3.1

default-namespace

XLMOD

remark

version: 1.1.12

remark

coverage: cross-linking reagents, cross-linker related post-translational modifications, and derivatization reagents for GC-MS and LC-MS

remark

creator: Lutz Fischer <lfischer ←at→ staffmail.ed.ac.uk>

remark

creator: Alexander Leitner <leitner ←at→ imsb.biol.ethz.ch>

remark

creator: Nils Hoffmann <nils.hoffmann ←at→ isas.de>

remark

creator: Gerhard Mayer <mayerg97 ←at→ rub.de>

remark

This work is licensed under the Creative Commons Attribution 4.0 International (CC BY 4.0) license.

remark

To view a copy of this license, visit https://creativecommons.org/licenses/by/4.0/ or send a letter to Creative Commons, 444 Castro Street, Suite 900, Mountain View, California, 94041, USA.

2. Definitions and Terms

Table 2. Typedef [part_of]

id

part_of

name

part_of

is_transitive

true

def

"The basic part of relationship indicating a top-level branch of this ontology." [OBO:defs]

2.1. is_activatable is_activatable

Table 3. Typedef [is_activatable]

id

is_activatable

name

is_activatable

def

"Indicates how the cross-linking reagent can be activated." [OBO:defs]

2.2. is_analog_of is_analog_of

Table 4. Typedef [is_analog_of]

id

is_analog_of

name

is_analog_of

def

"Indicates biochemical analogues of nucleobases, nucleosides or amino acids." [OBO:defs]

2.3. is_cleavable is_cleavable

Table 5. Typedef [is_cleavable]

id

is_cleavable

name

is_cleavable

def

"Indicates that the cross-linking reagent is cleavable." [OBO:defs]

2.4. is_labelled is_labelled

Table 6. Typedef [is_labelled]

id

is_labelled

name

is_labelled

def

"Indicates that the cross-linking or derivatization reagent has an isotopic label." [OBO:defs]

2.5. is_partially_reacted is_partially_reacted

Table 7. Typedef [is_partially_reacted]

id

is_partially_reacted

name

is_partially_reacted

def

"Specifies the type of the cross-linker related chemical modification." [OBO:defs]

2.6. is_reactive_with is_reactive_with

Table 8. Typedef [is_reactive_with]

id

is_reactive_with

name

is_reactive_with

def

"Indicates the chemical group that can react with the cross-linking or derivatization reagent." [OBO:defs]

2.7. is_side_product_of is_side_product_of

Table 9. Typedef [is_side_product_of]

id

is_side_product_of

name

is_side_product_of

def

"Indicates the cross-linking reagent from which the chemical modification is derived." [OBO:defs]

2.8. has_handle has_handle

Table 10. Typedef [has_handle]

id

has_handle

name

has_handle

def

"Indicates that the cross-linking reagent has a handle that can be used for detection/identification, enrichment or purification." [OBO:defs]

2.9. has_click_enabled_linker has_click_enabled_linker

Table 11. Typedef [has_click_enabled_linker]

id

has_click_enabled_linker

name

has_click_enabled_linker

def

"Indicates that the cross-linking reagent has a linker that can be enabled by click chemistry." [OBO:defs]

2.10. has_neutral_loss_reporter has_neutral_loss_reporter

Table 12. Typedef [has_neutral_loss_reporter]

id

has_neutral_loss_reporter

name

has_neutral_loss_reporter

def

"Indicates that the cross-linking reagent has a neutral loss reporter." [OBO:defs]

2.11. has_property has_property

Table 13. Typedef [has_property]

id

has_property

name

has_property

def

"Indicates a property of a cross-linking or derivatization reagent." [OBO:defs]

2.12. has_chromophore has_chromophore

Table 14. Typedef [has_chromophore]

id

has_chromophore

name

has_chromophore

def

"Indicates that the derivatization reagent can be detected by the specified chromophore." [OBO:defs]

2.13. has_electrophore has_electrophore

Table 15. Typedef [has_electrophore]

id

has_electrophore

name

has_electrophore

def

"Indicates that the derivatization reagent can be detected by the specified electrophore." [OBO:defs]

2.14. has_fluorophore has_fluorophore

Table 16. Typedef [has_fluorophore]

id

has_fluorophore

name

has_fluorophore

def

"Indicates that the derivatization reagent can be detected by the specified fluorophore." [OBO:defs]

2.15. has_reactive_group has_reactive_group

Table 17. Typedef [has_reactive_group]

id

has_reactive_group

name

has_reactive_group

def

"Indicates that the cross-linking or derivatization reagent has the specified reactive group." [OBO:defs]

2.16. XLMOD:00000 Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary

Table 18. Term [XLMOD:00000]

id

XLMOD:00000

name

Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary

def

"Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary." [PSI:XL]

2.17. XLMOD:00001 cross-linking entity

Table 19. Term [XLMOD:00001]

id

XLMOD:00001

name

cross-linking entity

def

"Entity relevant to the domain of cross-linking in proteomics." [PSI:XL]

relationship

part_of XLMOD:00000 Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary ! Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary

2.18. XLMOD:00002 cross-linker related chemical modification

Table 20. Term [XLMOD:00002]

id

XLMOD:00002

name

cross-linker related chemical modification

def

"Dead-end modification resulting from a cross-linker reagent reacting only with one peptide." [PSI:XL]

relationship

part_of XLMOD:00000 Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary ! Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary

2.19. XLMOD:00003 label transfer reagent

Table 21. Term [XLMOD:00003]

id

XLMOD:00003

name

label transfer reagent

def

"A cross-linker acting as label transfer reagent." [PSI:XL]

relationship

part_of XLMOD:00000 Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary ! Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary

2.20. XLMOD:00004 cross-linker

Table 22. Term [XLMOD:00004]

id

XLMOD:00004

name

cross-linker

def

"Compound that can link two or more polymer chains." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

2.21. XLMOD:00005 homofunctional cross-linker

Table 23. Term [XLMOD:00005]

id

XLMOD:00005

name

homofunctional cross-linker

def

"A cross-linking reagent with identical reactive groups at each end of the spacer arm." [PSI:XL]

is_a

XLMOD:00004 cross-linker ! cross-linker

2.22. XLMOD:00006 heterofunctional cross-linker

Table 24. Term [XLMOD:00006]

id

XLMOD:00006

name

heterofunctional cross-linker

def

"A cross-linking reagent with at least two different reactive groups." [PSI:XL]

is_a

XLMOD:00004 cross-linker ! cross-linker

2.23. XLMOD:00007 photoreactive cross-linker

Table 25. Term [XLMOD:00007]

id

XLMOD:00007

name

photoreactive cross-linker

def

"OBSOLETE A cross-linking reagent that becomes reactive when exposed to ultraviolet or visible light." [PSI:XL]

comment

This term was made obsolete because photo-reactivity is now encoded for the reactive groups of the cross-linkers, see (XLMOD:00108).

is_obsolete

true

2.24. XLMOD:00008 zero-length cross-linker

Table 26. Term [XLMOD:00008]

id

XLMOD:00008

name

zero-length cross-linker

def

"A cross-linking reagent causing direct conjugation without becoming part of the final cross-link between the target molecules." [PSI:XL]

is_a

XLMOD:00004 cross-linker ! cross-linker

2.25. XLMOD:00009 cross-linking attribute

Table 27. Term [XLMOD:00009]

id

XLMOD:00009

name

cross-linking attribute

def

"An attribute describing a cross-linker." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

2.26. XLMOD:00010 deuterium labelled

Table 28. Term [XLMOD:00010]

id

XLMOD:00010

name

deuterium labelled

def

"Indicates that a cross-linker is deuterium labelled." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.27. XLMOD:00011 hydrolyzed

Table 29. Term [XLMOD:00011]

id

XLMOD:00011

name

hydrolyzed

def

"Indicates that a cross-linker is hydrolyzed, for example for NHS-type reagents -C(=O)-NHS was converted to -C(=O)-OH." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.28. XLMOD:00012 amidated

Table 30. Term [XLMOD:00012]

id

XLMOD:00012

name

amidated

def

"Indicates that a cross-linker is amidated." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.29. XLMOD:00013 membrane permeable

Table 31. Term [XLMOD:00013]

id

XLMOD:00013

name

membrane permeable

def

"Indicates that a cross-linker is membrane permeable." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.30. XLMOD:00014 hydrophilic

Table 32. Term [XLMOD:00014]

id

XLMOD:00014

name

hydrophilic

def

"Indicates that a cross-linker is hydrophilic." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.31. XLMOD:00015 fluorescent

Table 33. Term [XLMOD:00015]

id

XLMOD:00015

name

fluorescent

def

"Indicates that a cross-linker is fluorescent." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.32. XLMOD:00016 cleavable

Table 34. Term [XLMOD:00016]

id

XLMOD:00016

name

cleavable

def

"Indicates that a cross-linker is cleavable." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.33. XLMOD:00017 chemically cleavable

Table 35. Term [XLMOD:00017]

id

XLMOD:00017

name

chemically cleavable

def

"Indicates that a cross-linker is chemically cleavable." [PSI:XL]

is_a

XLMOD:00016 cleavable ! cleavable

2.34. XLMOD:00018 cleavable by MS2 labile bond

Table 36. Term [XLMOD:00018]

id

XLMOD:00018

name

cleavable by MS2 labile bond

def

"Indicates that a cross-linker is mass-spectrometrically cleavable, i.e. contains a MS2 labile bond leading to fragments detected in MS3." [PSI:XL]

is_a

XLMOD:00016 cleavable ! cleavable

2.35. XLMOD:00019 enrichable

Table 37. Term [XLMOD:00019]

id

XLMOD:00019

name

enrichable

def

"Indicates that a cross-linker facilitates enrichment." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.36. XLMOD:00020 iodinatable

Table 38. Term [XLMOD:00020]

id

XLMOD:00020

name

iodinatable

def

"Indicates that a cross-linker is iodinatable, e.g. for autoradiographic detection by radio-labelling with J-131." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.37. XLMOD:00021 ammonium amidated

Table 39. Term [XLMOD:00021]

id

XLMOD:00021

name

ammonium amidated

def

"Indicates a dead-end modification that was amidated by an ammonium salt, like e.g. bicarbonate, phosphate, chloride, for example for NHS-type reagents -C(=O)-NHS was converted to -C(=O)-NH2." [PSI:XL]

is_a

XLMOD:00012 amidated ! amidated

2.38. XLMOD:00022 Tris amidated

Table 40. Term [XLMOD:00022]

id

XLMOD:00022

name

Tris amidated

def

"Indicates a dead-end modification that was amidated by Tris(hydroxymethyl)-aminomethane, for example for NHS-type reagents -C(=O)-NHS was converted to -C(=O)-NHC(CH2OH)3." [PSI:XL]

is_a

XLMOD:00012 amidated ! amidated

2.39. XLMOD:00023 cleavable S-S bond

Table 41. Term [XLMOD:00023]

id

XLMOD:00023

name

cleavable S-S bond

def

"Indicates that a cross-linker contains a cleavable S-S bond, which is chemically cleavable by reducing agents like e.g. thiols, beta-mercaptoethanol, dithiothreitol (DTT), mercaptomethylamine or Tris(2-carboxyethyl)phosphin (TCEP)." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

relationship

is_cleavable XLMOD:00041 thiol cleavable ! thiol cleavable

relationship

is_cleavable XLMOD:00038 DTT cleavable ! DTT cleavable

relationship

is_cleavable XLMOD:00042 TCEP cleavable ! TCEP cleavable

relationship

is_cleavable XLMOD:00043 mercaptoethanol cleavable ! mercaptoethanol cleavable

2.40. XLMOD:00024 periodate cleavable

Table 42. Term [XLMOD:00024]

id

XLMOD:00024

name

periodate cleavable

def

"Indicates that a cross-linker is chemically cleavable by the oxidizing agent periodate." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.41. XLMOD:00025 hydroxylamine cleavable

Table 43. Term [XLMOD:00025]

id

XLMOD:00025

name

hydroxylamine cleavable

def

"Indicates that a cross-linker is chemically cleavable by hydroxylamine." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.42. XLMOD:00026 reactive group attribute

Table 44. Term [XLMOD:00026]

id

XLMOD:00026

name

reactive group attribute

def

"An attribute describing a reactive group." [PSI:XL]

relationship

part_of XLMOD:00001 cross-linking entity ! cross-linking entity

2.43. XLMOD:00027 chemically reactive

Table 45. Term [XLMOD:00027]

id

XLMOD:00027

name

chemically reactive

def

"Indicates that a reactive group reacts with specific functional groups." [PSI:XL]

is_a

XLMOD:00026 reactive group attribute ! reactive group attribute

2.44. XLMOD:00028 primary amine reactive

Table 46. Term [XLMOD:00028]

id

XLMOD:00028

name

primary amine reactive

def

"Indicates that a reactive group is reactive with primary amino (-NH2) groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.45. XLMOD:00029 sulfhydryl reactive

Table 47. Term [XLMOD:00029]

id

XLMOD:00029

name

sulfhydryl reactive

def

"Indicates that a reactive group is reactive with sulfhydryl (-SH) groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.46. XLMOD:00030 carboxyl reactive

Table 48. Term [XLMOD:00030]

id

XLMOD:00030

name

carboxyl reactive

def

"Indicates that a reactive group is reactive with carboxyl (-COOH) groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.47. XLMOD:00031 aldehyde reactive

Table 49. Term [XLMOD:00031]

id

XLMOD:00031

name

aldehyde reactive

def

"Indicates that a reactive group is reactive with aldehyde (-CHO) or carbonyl (-CO) groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.48. XLMOD:00032 hydroxyl reactive

Table 50. Term [XLMOD:00032]

id

XLMOD:00032

name

hydroxyl reactive

def

"Indicates that a reactive group is reactive with hydroxyl (-OH) groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.49. XLMOD:00033 azide reactive

Table 51. Term [XLMOD:00033]

id

XLMOD:00033

name

azide reactive

def

"Indicates that a reactive group is reactive with azide (-N3) groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.50. XLMOD:00034 photo cleavable

Table 52. Term [XLMOD:00034]

id

XLMOD:00034

name

photo cleavable

def

"Indicates that a cross-linker is cleavable by light." [PSI:XL]

is_a

XLMOD:00016 cleavable ! cleavable

2.51. XLMOD:00035 CID cleavable

Table 53. Term [XLMOD:00035]

id

XLMOD:00035

name

CID cleavable

def

"Indicates that a cross-linker is mass-spectrometrically cleavable by collission induced dissociation." [PSI:XL]

is_a

XLMOD:00016 cleavable ! cleavable

2.52. XLMOD:00036 13C labelled

Table 54. Term [XLMOD:00036]

id

XLMOD:00036

name

13C labelled

def

"Indicates that a cross-linker is labelled with carbon-13." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.53. XLMOD:00037 non-selective

Table 55. Term [XLMOD:00037]

id

XLMOD:00037

name

non-selective

def

"Indicates that a cross-linker is non-selective (i.e. can react with different amino acids, but also with DNA/RNA and carbohydrates (aldehyde reactive))." [PSI:XL]

is_a

XLMOD:00026 reactive group attribute ! reactive group attribute

2.54. XLMOD:00038 DTT cleavable

Table 56. Term [XLMOD:00038]

id

XLMOD:00038

name

DTT cleavable

def

"Indicates that a cross-linker is chemically cleavable by the reducing agent DTT (dithiothreitol)." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.55. XLMOD:00039 ammonium cleavable

Table 57. Term [XLMOD:00039]

id

XLMOD:00039

name

ammonium cleavable

def

"Indicates that a cross-linker is chemically cleavable by ammonium hydroxide." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.56. XLMOD:00040 ISD cleavable

Table 58. Term [XLMOD:00040]

id

XLMOD:00040

name

ISD cleavable

def

"Indicates that a cross-linker is mass-spectrometrically cleavable by in-source decay." [PSI:XL]

is_a

XLMOD:00016 cleavable ! cleavable

2.57. XLMOD:00041 thiol cleavable

Table 59. Term [XLMOD:00041]

id

XLMOD:00041

name

thiol cleavable

def

"Indicates that a cross-linker is mass-spectrometrically cleavable (reducible) by thiols." [PSI:XL]

synonym

"DTT cleavable" RELATED []

synonym

"TCEP cleavable" RELATED []

synonym

"mercaptoethanol cleavable" RELATED []

is_a

XLMOD:00016 cleavable ! cleavable

2.58. XLMOD:00042 TCEP cleavable

Table 60. Term [XLMOD:00042]

id

XLMOD:00042

name

TCEP cleavable

def

"Indicates that a cross-linker is chemically cleavable by the reducing agent TCEP (Tris(2-carboxyethyl)phosphin)." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.59. XLMOD:00043 mercaptoethanol cleavable

Table 61. Term [XLMOD:00043]

id

XLMOD:00043

name

mercaptoethanol cleavable

def

"Indicates that a cross-linker is chemically cleavable by the reducing agent mercaptoethanol." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.60. XLMOD:00044 mass defect labelled

Table 62. Term [XLMOD:00044]

id

XLMOD:00044

name

mass defect labelled

def

"Indicates that a cross-linker is mass defect labelled." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.61. XLMOD:00045 thioether reactive

Table 63. Term [XLMOD:00045]

id

XLMOD:00045

name

thioether reactive

def

"Indicates that a reactive group is reactive with thioether (R1-S-R2) groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.62. XLMOD:00046 imidazole reactive

Table 64. Term [XLMOD:00046]

id

XLMOD:00046

name

imidazole reactive

def

"Indicates that a reactive group is reactive with the heterocyclic imidazole groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.63. XLMOD:00047 thioesterized

Table 65. Term [XLMOD:00047]

id

XLMOD:00047

name

thioesterized

def

"Indicates that a cross-linker is thioesterized." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.64. XLMOD:00048 nucleic acid reactive

Table 66. Term [XLMOD:00048]

id

XLMOD:00048

name

nucleic acid reactive

def

"Indicates that a reactive group is reactive with RNA or DNA." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.65. XLMOD:00049 amino acid derivative

Table 67. Term [XLMOD:00049]

id

XLMOD:00049

name

amino acid derivative

def

"An amino acid derivative used in cross-linking experiments." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

2.66. XLMOD:00050 handle

Table 68. Term [XLMOD:00050]

id

XLMOD:00050

name

handle

def

"A handle attached to a cross-linker used for detection, affinity enrichment or purification." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

relationship

part_of XLMOD:00004 cross-linker ! cross-linker

2.67. XLMOD:00051 biotin

Table 69. Term [XLMOD:00051]

id

XLMOD:00051

name

biotin

def

"A Biotin affinity handle, enrichable with avidin, streptavidin or neutravidin, attached to a cross-linker." [PSI:XL]

is_a

XLMOD:00050 handle ! handle

is_a

XLMOD:00019 enrichable ! enrichable

2.68. XLMOD:00052 NO2 neutral loss reporter

Table 70. Term [XLMOD:00052]

id

XLMOD:00052

name

NO2 neutral loss reporter

def

"A NO2 detection tag." [PMID:19496583]

is_a

XLMOD:00050 handle ! handle

2.69. XLMOD:00053 alkyne

Table 71. Term [XLMOD:00053]

id

XLMOD:00053

name

alkyne

def

"An alkyne (hadrocarbon with at least one C-C triple bond) tag, e.g. BARAC (biarylazacycloctynone) to enable enrichment of cross-linked peptides by either coupling of an affinity group with alkyne-azido click chemistry or by using immobilized azide linkers." [PMID:19496583]

is_a

XLMOD:00050 handle ! handle

is_a

XLMOD:00019 enrichable ! enrichable

2.70. XLMOD:00054 DNB

Table 72. Term [XLMOD:00054]

id

XLMOD:00054

name

DNB

def

"A dinitrobenzole affinity handle for enrichment with anti-DNB antibodies, attached to a cross-linker." [PSI:XL]

is_a

XLMOD:00050 handle ! handle

is_a

XLMOD:00019 enrichable ! enrichable

2.71. XLMOD:00055 azide

Table 73. Term [XLMOD:00055]

id

XLMOD:00055

name

azide

def

"A photoreactive azide (-N3) tag to enable enrichment of cross-linked peptides with either immobilized alkyne linkers or by azide-alkyne click chemistry using biotin-alkyne respective biotin-phosphine." [PMID:20472459]

is_a

XLMOD:00050 handle ! handle

is_a

XLMOD:00019 enrichable ! enrichable

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.72. XLMOD:00056 CHCA

Table 74. Term [XLMOD:00056]

id

XLMOD:00056

name

CHCA

def

"An alpha-cyano-4-hydroxycinnamic acid UV-absorbing label for signal enhancement." [PMID:19902427]

is_a

XLMOD:00050 handle ! handle

2.73. XLMOD:00057 generic neutral loss reporter

Table 75. Term [XLMOD:00057]

id

XLMOD:00057

name

generic neutral loss reporter

def

"A generic neutral loss reporter." [PXI:XL]

is_a

XLMOD:00050 handle ! handle

2.74. XLMOD:00058 amino acid

Table 76. Term [XLMOD:00058]

id

XLMOD:00058

name

amino acid

def

"An amino acid compound." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

2.75. XLMOD:00059 L-Leucine

Table 77. Term [XLMOD:00059]

id

XLMOD:00059

name

L-Leucine

def

"The amino acid L-Leucine." [PXI:XL]

is_a

XLMOD:00058 amino acid ! amino acid

2.76. XLMOD:00060 L-Methionine

Table 78. Term [XLMOD:00060]

id

XLMOD:00060

name

L-Methionine

def

"The amino acid L-Methionine." [PXI:XL]

is_a

XLMOD:00058 amino acid ! amino acid

2.77. XLMOD:00061 base cleavable

Table 79. Term [XLMOD:00061]

id

XLMOD:00061

name

base cleavable

def

"Indicates that a cross-linker is chemically cleavable by bases." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.78. XLMOD:00062 hydrazine reactive

Table 80. Term [XLMOD:00062]

id

XLMOD:00062

name

hydrazine reactive

def

"Indicates that a reactive group is reactive with hydrazines (N2H4)." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.79. XLMOD:00063 carbonyl reactive

Table 81. Term [XLMOD:00063]

id

XLMOD:00063

name

carbonyl reactive

def

"Indicates that a reactive group is reactive with carbonyl (R1-CO-R2) groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.80. XLMOD:00064 oxidized

Table 82. Term [XLMOD:00064]

id

XLMOD:00064

name

oxidized

def

"Indicates that a cross-linker is oxidized, e.g. by oxidizing a carbonyl to a carboxyl functional group." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.81. XLMOD:00065 alkenized

Table 83. Term [XLMOD:00065]

id

XLMOD:00065

name

alkenized

def

"Indicates that a cross-linker is modified to it’s alkene form (loss of two hydrogen atoms by forming a C=C double bond)." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.82. XLMOD:00066 acid cleavable

Table 84. Term [XLMOD:00066]

id

XLMOD:00066

name

acid cleavable

def

"Indicates that a cross-linker is chemically cleavable by acids." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.83. XLMOD:00067 CID cleavable C-S bond

Table 85. Term [XLMOD:00067]

id

XLMOD:00067

name

CID cleavable C-S bond

def

"Indicates that a cross-linker contains a CID (Collision Induced Dissociation) cleavable C-S bond." [PSI:XL]

is_a

XLMOD:00035 CID cleavable ! CID cleavable

relationship

is_cleavable XLMOD:00018 cleavable by MS2 labile bond ! cleavable by MS2 labile bond

2.84. XLMOD:00068 L-Isoleucine

Table 86. Term [XLMOD:00068]

id

XLMOD:00068

name

L-Isoleucine

def

"The amino acid L-Isoleucine." [PXI:XL]

is_a

XLMOD:00058 amino acid ! amino acid

2.85. XLMOD:00069 18O labelled

Table 87. Term [XLMOD:00069]

id

XLMOD:00069

name

18O labelled

def

"Indicates that a cross-linker is labelled with oxygen-18." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.86. XLMOD:00070 L-Phenylalanine

Table 88. Term [XLMOD:00070]

id

XLMOD:00070

name

L-Phenylalanine

def

"The amino acid L-Phenylalanine." [PXI:XL]

is_a

XLMOD:00058 amino acid ! amino acid

2.87. XLMOD:00071 iminobiotintrifluoroacetamide

Table 89. Term [XLMOD:00071]

id

XLMOD:00071

name

iminobiotintrifluoroacetamide

def

"A Iminobiotin trifluoroacetamide affinity handle, enrichable with avidin, streptavidin or neutravidin, attached to a cross-linker." [PSI:XL]

is_a

XLMOD:00050 handle ! handle

is_a

XLMOD:00019 enrichable ! enrichable

relationship

is_reactive_with XLMOD:00072 avidin reactive ! avidin reactive

2.88. XLMOD:00072 avidin reactive

Table 90. Term [XLMOD:00072]

id

XLMOD:00072

name

avidin reactive

def

"Indicates that a reactive group is reactive with either of the glycoproteins avidin, streptavidin or neutravidin." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.89. XLMOD:00073 nucleobase

Table 91. Term [XLMOD:00073]

id

XLMOD:00073

name

nucleobase

def

"A nitrogeneous base occurring in nucleic acids." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

2.90. XLMOD:00074 purine base

Table 92. Term [XLMOD:00074]

id

XLMOD:00074

name

purine base

def

"A purine base occurring in nucleic acids." [PSI:XL]

is_a

XLMOD:00073 nucleobase ! nucleobase

2.91. XLMOD:00075 pyrimidine base

Table 93. Term [XLMOD:00075]

id

XLMOD:00075

name

pyrimidine base

def

"A pyrimidine base occurring in nucleic acids." [PSI:XL]

is_a

XLMOD:00073 nucleobase ! nucleobase

2.92. XLMOD:00076 adenine

Table 94. Term [XLMOD:00076]

id

XLMOD:00076

name

adenine

def

"The nucleobase adenine." [PXI:XL]

is_a

XLMOD:00074 purine base ! purine base

2.93. XLMOD:00077 guanine

Table 95. Term [XLMOD:00077]

id

XLMOD:00077

name

guanine

def

"The nucleobase guanine." [PXI:XL]

is_a

XLMOD:00074 purine base ! purine base

2.94. XLMOD:00078 cytosine

Table 96. Term [XLMOD:00078]

id

XLMOD:00078

name

cytosine

def

"The nucleobase cytosine." [PXI:XL]

is_a

XLMOD:00075 pyrimidine base ! pyrimidine base

2.95. XLMOD:00079 thymine

Table 97. Term [XLMOD:00079]

id

XLMOD:00079

name

thymine

def

"The nucleobase thymine." [PXI:XL]

is_a

XLMOD:00075 pyrimidine base ! pyrimidine base

2.96. XLMOD:00080 uracil

Table 98. Term [XLMOD:00080]

id

XLMOD:00080

name

uracil

def

"The nucleobase uracil." [PXI:XL]

is_a

XLMOD:00075 pyrimidine base ! pyrimidine base

2.97. XLMOD:00081 nucleobase derivative

Table 99. Term [XLMOD:00081]

id

XLMOD:00081

name

nucleobase derivative

def

"A nucleobase derivative used in cross-linking experiments for protein-oligonucleotide cross-linking." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

relationship

is_analog_of XLMOD:00073 nucleobase ! nucleobase

2.98. XLMOD:00082 nucleoside

Table 100. Term [XLMOD:00082]

id

XLMOD:00082

name

nucleoside

def

"A combination of a nucleobase and a sugar (either ribose or deoxyribose)." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

2.99. XLMOD:00083 adenosine

Table 101. Term [XLMOD:00083]

id

XLMOD:00083

name

adenosine

def

"The nucleoside adenosine." [PXI:XL]

is_a

XLMOD:00082 nucleoside ! nucleoside

2.100. XLMOD:00084 guanosine

Table 102. Term [XLMOD:00084]

id

XLMOD:00084

name

guanosine

def

"The nucleoside guanosine." [PXI:XL]

is_a

XLMOD:00082 nucleoside ! nucleoside

2.101. XLMOD:00085 cytidine

Table 103. Term [XLMOD:00085]

id

XLMOD:00085

name

cytidine

def

"The nucleoside cytidine." [PXI:XL]

is_a

XLMOD:00082 nucleoside ! nucleoside

2.102. XLMOD:00086 uridine

Table 104. Term [XLMOD:00086]

id

XLMOD:00086

name

uridine

def

"The nucleoside uridine." [PXI:XL]

is_a

XLMOD:00082 nucleoside ! nucleoside

2.103. XLMOD:00087 5-methyluridine

Table 105. Term [XLMOD:00087]

id

XLMOD:00087

name

5-methyluridine

def

"The nucleoside 5-methyluridine." [PXI:XL]

is_a

XLMOD:00082 nucleoside ! nucleoside

2.104. XLMOD:00088 nucleoside derivative

Table 106. Term [XLMOD:00088]

id

XLMOD:00088

name

nucleoside derivative

def

"A nucleoside derivative used in cross-linking experiments for protein-oligonucleotide cross-linking." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

relationship

is_analog_of XLMOD:00082 nucleoside ! nucleoside

2.105. XLMOD:00089 RNA-SH

Table 107. Term [XLMOD:00089]

id

XLMOD:00089

name

RNA-SH

def

"Thiol-modified RNA." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

2.106. XLMOD:00090 biotin-alkyne

Table 108. Term [XLMOD:00090]

id

XLMOD:00090

name

biotin-alkyne

def

"A biotin-alkyne affinity handle, which can be used for enrichment with click-chemistry." [PSI:XL]

is_a

XLMOD:00050 handle ! handle

is_a

XLMOD:00019 enrichable ! enrichable

relationship

is_reactive_with XLMOD:00033 azide reactive ! azide reactive

2.107. XLMOD:00091 tetramethylrhodamine-alkyne

Table 109. Term [XLMOD:00091]

id

XLMOD:00091

name

tetramethylrhodamine-alkyne

def

"A tetramethylrhodamine-alkyne affinity handle, which can be used for enrichment with click-chemistry." [PSI:XL]

synonym

"TAMRA" EXACT []

is_a

XLMOD:00050 handle ! handle

is_a

XLMOD:00019 enrichable ! enrichable

relationship

is_reactive_with XLMOD:00033 azide reactive ! azide reactive

2.108. XLMOD:00092 lipid analogue

Table 110. Term [XLMOD:00092]

id

XLMOD:00092

name

lipid analogue

def

"A lipid analogue used in cross-linking experiments for lipid-protein cross-linking." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

2.109. XLMOD:00093 sialic acid analogue

Table 111. Term [XLMOD:00093]

id

XLMOD:00093

name

sialic acid analogue

def

"A sialic acid analogue used in cross-linking experiments for glycan-protein cross-linking." [PSI:XL]

is_a

XLMOD:00001 cross-linking entity ! cross-linking entity

2.110. XLMOD:00094 alkenized cross-linker related chemical modification

Table 112. Term [XLMOD:00094]

id

XLMOD:00094

name

alkenized cross-linker related chemical modification

def

"Alkenization dead-end modification resulting from a cross-linker reagent reacting only with one peptide." [PSI:XL]

is_a

XLMOD:00002 cross-linker related chemical modification ! cross-linker related chemical modification

2.111. XLMOD:00095 ammonium amidation cross-linker related chemical modification

Table 113. Term [XLMOD:00095]

id

XLMOD:00095

name

ammonium amidation cross-linker related chemical modification

def

"Ammonium amidation dead-end modification resulting from a cross-linker reagent reacting only with one peptide." [PSI:XL]

is_a

XLMOD:00002 cross-linker related chemical modification ! cross-linker related chemical modification

2.112. XLMOD:00096 hydrolization cross-linker related chemical modification

Table 114. Term [XLMOD:00096]

id

XLMOD:00096

name

hydrolization cross-linker related chemical modification

def

"Hydrolization dead-end modification resulting from a cross-linker reagent reacting only with one peptide." [PSI:XL]

is_a

XLMOD:00002 cross-linker related chemical modification ! cross-linker related chemical modification

2.113. XLMOD:00097 oxidation cross-linker related chemical modification

Table 115. Term [XLMOD:00097]

id

XLMOD:00097

name

oxidation cross-linker related chemical modification

def

"Oxidition dead-end modification resulting from a cross-linker reagent reacting only with one peptide." [PSI:XL]

is_a

XLMOD:00002 cross-linker related chemical modification ! cross-linker related chemical modification

2.114. XLMOD:00098 thioesterization cross-linker related chemical modification

Table 116. Term [XLMOD:00098]

id

XLMOD:00098

name

thioesterization cross-linker related chemical modification

def

"Thio-esterization dead-end modification resulting from a cross-linker reagent reacting only with one peptide." [PSI:XL]

is_a

XLMOD:00002 cross-linker related chemical modification ! cross-linker related chemical modification

2.115. XLMOD:00099 formic acid cleavable

Table 117. Term [XLMOD:00099]

id

XLMOD:00099

name

formic acid cleavable

def

"Indicates that a cross-linker is chemically cleavable by formic acid." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.116. XLMOD:00100 reactive group

Table 118. Term [XLMOD:00100]

id

XLMOD:00100

name

reactive group

def

"Part of a cross-linker that reacts with the amino-acids of the protein." [PSI:XL]

is_a

XLMOD:00009 cross-linking attribute ! cross-linking attribute

2.117. XLMOD:00101 NHS ester

Table 119. Term [XLMOD:00101]

id

XLMOD:00101

name

NHS ester

def

"A reactive group (N-hydroxysuccinimide) that reacts with lysines and N-termini but also serines, threonines and tyrosines." [PSI:XL]

synonym

"N-hydroxysuccinimide ester" EXACT []

property_value

specificities: "(K,Protein N-term)" xsd:string

property_value

secondarySpecificities: "(S,T,Y)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.118. XLMOD:00102 Sulfo NHS ester

Table 120. Term [XLMOD:00102]

id

XLMOD:00102

name

Sulfo NHS ester

def

"A reactive group (N-hydroxysulfosuccinimide) that reacts with lysines and N-termini but also serines, threonines and tyrosines." [PSI:XL]

synonym

"N-hydroxysulfosuccinimide ester" EXACT []

property_value

specificities: "(K,Protein N-term)" xsd:string

property_value

secondarySpecificities: "(S,T,Y)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.119. XLMOD:00103 diazirine

Table 121. Term [XLMOD:00103]

id

XLMOD:00103

name

diazirine

def

"Photoreactive group (R1-CN2-R2) that inserts into any C-H or N-H bond." [PSI:XL]

property_value

waveLengthRange: "330-370 nm" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.120. XLMOD:00104 N-hydroxyphthalimide

Table 122. Term [XLMOD:00104]

id

XLMOD:00104

name

N-hydroxyphthalimide

def

"A reactive group that reacts with amines." [PMID:19994840]

property_value

specificities: "(K,N,Q,R,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.121. XLMOD:00105 carbodiimide

Table 123. Term [XLMOD:00105]

id

XLMOD:00105

name

carbodiimide

def

"A Carboxyl-to-amine (R1-N=C=N_R2) reactive chemical group." [PSI:XL]

property_value

specificities: "(K,N,Q,R,Protein N-term)&(E,D,Protein C-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.122. XLMOD:00106 maleimide

Table 124. Term [XLMOD:00106]

id

XLMOD:00106

name

maleimide

def

"A reactive group that reacts with sulfhydryl groups." [PSI:XL]

property_value

specificities: "©" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

2.123. XLMOD:00107 nitrophenyl azide

Table 125. Term [XLMOD:00107]

id

XLMOD:00107

name

nitrophenyl azide

def

"A nitrophenyl azide photoreactive group." [PSI:XL]

property_value

waveLengthRange: "320-370 nm" xsd:string

is_a

XLMOD:00114 aryl azide ! aryl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

relationship

is_reactive_with XLMOD:00089 RNA-SH ! RNA-SH

2.124. XLMOD:00108 photoreactive

Table 126. Term [XLMOD:00108]

id

XLMOD:00108

name

photoreactive

def

"Indicates that a reactive group is photoreactive." [PSI:XL]

is_a

XLMOD:00026 reactive group attribute ! reactive group attribute

2.125. XLMOD:00109 pyridinyldisulfide

Table 127. Term [XLMOD:00109]

id

XLMOD:00109

name

pyridinyldisulfide

def

"A pyridinyldisulfide reactive group that reacts with sulfhydryl groups to form disulfide bonds." [PSI:XL]

synonym

"pyridyl disulfide" EXACT []

synonym

"pyridyldithiol" EXACT []

property_value

specificities: "©" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

2.126. XLMOD:00110 hydrazide

Table 128. Term [XLMOD:00110]

id

XLMOD:00110

name

hydrazide

def

"A hydrazide reactive group (-CO-NH-NH2) that reacts with carbonyls to form hydrazone bonds." [PSI:XL]

property_value

specificities: "(D,E,Protein C-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.127. XLMOD:00111 imidoester

Table 129. Term [XLMOD:00111]

id

XLMOD:00111

name

imidoester

def

"An amine-reactive chemical group (R1-C(=NH)-OR2)." [PSI:XL]

property_value

specificities: "(K,N,Q,R,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.128. XLMOD:00112 haloacetyl

Table 130. Term [XLMOD:00112]

id

XLMOD:00112

name

haloacetyl

def

"A reactive group (alpha-haloacetyl, halo-C2H5), mostly a iodoacetyl, bromoacetyl or chloroacetyl group, that reacts with sulfhydryl groups." [PSI:XL]

property_value

specificities: "©" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

2.129. XLMOD:00113 alkoxyamine

Table 131. Term [XLMOD:00113]

id

XLMOD:00113

name

alkoxyamine

def

"A reactive group (R-O-N-R2) that conjugates to carbonyls." [PSI:XL]

property_value

specificities: "(D,E,Protein C-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

2.130. XLMOD:00114 aryl azide

Table 132. Term [XLMOD:00114]

id

XLMOD:00114

name

aryl azide

def

"Photoreactive aryl(Ar)-substitited azide (N=N=N) group, that initiates addition reactions with double bonds or insertion into C-H and N-H bonds or reacts with primary amines." [PSI:XL]

property_value

waveLengthRange: "250-350 nm" xsd:string

is_a

XLMOD:00055 azide ! azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.131. XLMOD:00115 glyoxal

Table 133. Term [XLMOD:00115]

id

XLMOD:00115

name

glyoxal

def

"An arginine-specific reactive group (H-CO-CO-H)." [PSI:XL]

property_value

baseSpecificities: "(Guanine)" xsd:string

property_value

specificities: "®" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

2.132. XLMOD:00116 aldehyde group

Table 134. Term [XLMOD:00116]

id

XLMOD:00116

name

aldehyde group

def

"An aldehyde (R-CO-H) reactive group." [PSI:XL]

property_value

specificities: "(K,N,R,Q,Y,Protein N-term)" xsd:string

property_value

secondarySpecificities: "(C,F,H,S,T,W)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.133. XLMOD:00117 acryl

Table 135. Term [XLMOD:00117]

id

XLMOD:00117

name

acryl

def

"A reactive group (CH2=CH-CO-R) that reacts with sulfhydryl (-SH) groups." [PMID:22641729]

property_value

specificities: "©" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

2.134. XLMOD:00118 tetrafluorophenyl azide

Table 136. Term [XLMOD:00118]

id

XLMOD:00118

name

tetrafluorophenyl azide

def

"Tetrafluorophenyl (TFP) azide (N=N=N) photoreactive group." [PMID:22641729]

is_a

XLMOD:00114 aryl azide ! aryl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.135. XLMOD:00119 benzophenone

Table 137. Term [XLMOD:00119]

id

XLMOD:00119

name

benzophenone

def

"Benzophenone photoreactive group." [PMID:22641729]

property_value

waveLengthRange: "350-360 nm" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

relationship

is_reactive_with XLMOD:00089 RNA-SH ! RNA-SH

2.136. XLMOD:00120 pentafluorophenyl

Table 138. Term [XLMOD:00120]

id

XLMOD:00120

name

pentafluorophenyl

def

"A reactive group (F5-Ph) that reacts with amines." [PMID:22067100]

synonym

"PFP ester" EXACT []

property_value

specificities: "(K,N,Q,R,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.137. XLMOD:00121 methanethiosulfonate

Table 139. Term [XLMOD:00121]

id

XLMOD:00121

name

methanethiosulfonate

def

"A reactive group (Ch3-SO2-S-R) that reacts with sulfhydryl (-SH) groups." [PSI:XL]

synonym

"MTS" EXACT []

property_value

specificities: "©" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

2.138. XLMOD:00122 4-azido-2,3,5,6-tetrafluorobenzene

Table 140. Term [XLMOD:00122]

id

XLMOD:00122

name

4-azido-2,3,5,6-tetrafluorobenzene

def

"Photoreactive group that inserts into any C-H bond." [PSI:XL]

synonym

"ATFB" EXACT []

property_value

waveLengthRange: "UV" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.139. XLMOD:00123 thermoreactive

Table 141. Term [XLMOD:00123]

id

XLMOD:00123

name

thermoreactive

def

"Indicates that a reactive group is thermoreactive." [PSI:XL]

is_a

XLMOD:00026 reactive group attribute ! reactive group attribute

2.140. XLMOD:00124 isocyanate

Table 142. Term [XLMOD:00124]

id

XLMOD:00124

name

isocyanate

def

"An isocyanate (-N=C=O) that reacts with hydroxyl groups." [PMID:21557289]

property_value

specificities: "(S,T,Y)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06500 secondary amine reactive ! secondary amine reactive

2.141. XLMOD:00125 hydroxyphenyl azide

Table 143. Term [XLMOD:00125]

id

XLMOD:00125

name

hydroxyphenyl azide

def

"A hydroxyphenyl azid photoreactive group." [PSI:XL]

property_value

waveLengthRange: "320-350 nm" xsd:string

is_a

XLMOD:00114 aryl azide ! aryl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.142. XLMOD:00126 phenyl azide

Table 144. Term [XLMOD:00126]

id

XLMOD:00126

name

phenyl azide

def

"A phenyl azide photoreactive group." [PSI:XL]

synonym

"aryl nitrene" EXACT []

property_value

waveLengthRange: "320-350 nm" xsd:string

is_a

XLMOD:00114 aryl azide ! aryl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.143. XLMOD:00127 iodoacetyl

Table 145. Term [XLMOD:00127]

id

XLMOD:00127

name

iodoacetyl

def

"A iodoacetyl reactive group, that reacts with sulfhydryl groups." [PSI:XL]

property_value

specificities: "(C,H)" xsd:string

is_a

XLMOD:00112 haloacetyl ! haloacetyl

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

2.144. XLMOD:00128 bromoacetyl

Table 146. Term [XLMOD:00128]

id

XLMOD:00128

name

bromoacetyl

def

"A bromoacetyl reactive group, that reacts with sulfhydryl groups." [PSI:XL]

property_value

specificities: "(C,H)" xsd:string

is_a

XLMOD:00112 haloacetyl ! haloacetyl

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

2.145. XLMOD:00129 hydroxybenzotriazole

Table 147. Term [XLMOD:00129]

id

XLMOD:00129

name

hydroxybenzotriazole

def

"A reactive group that reacts with amines." [PMID:19994840]

property_value

specificities: "(K,N,Q,R,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.146. XLMOD:00130 1-hydroxy-7-azabenzotriazole

Table 148. Term [XLMOD:00130]

id

XLMOD:00130

name

1-hydroxy-7-azabenzotriazole

def

"A reactive group that reacts with amines." [PMID:19994840]

property_value

specificities: "(K,N,Q,R,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.147. XLMOD:00131 thioimidate

Table 149. Term [XLMOD:00131]

id

XLMOD:00131

name

thioimidate

def

"A reactive group that reacts with amines." [PMID:20795639]

property_value

specificities: "(K,N,Q,R,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.148. XLMOD:00132 platinum(II)

Table 150. Term [XLMOD:00132]

id

XLMOD:00132

name

platinum(II)

def

"Platinum(II) coordinates with the side chains of methionine (Met), cysteine (Cys), and histidine(His), namely, thioether, sulfhydryl, and imidazole." [PMID:21591778]

property_value

baseSpecificities: "(Guanine)" xsd:string

property_value

secondaryBaseSpecificities: "(Adenine, Cytosine)" xsd:string

property_value

specificities: "(C,H,M)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

relationship

is_reactive_with XLMOD:00045 thioether reactive ! thioether reactive

relationship

is_reactive_with XLMOD:00046 imidazole reactive ! imidazole reactive

2.149. XLMOD:00133 amine reactive group

Table 151. Term [XLMOD:00133]

id

XLMOD:00133

name

amine reactive group

def

"Reactive group (-NH2) that reacts with carboxyl (-COOH) groups." [PSI:XL]

property_value

specificities: "(D,E)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.150. XLMOD:00134 psoralen

Table 152. Term [XLMOD:00134]

id

XLMOD:00134

name

psoralen

def

"A photoreactive group that reacts with pyrimidines, especially thymines of nucleic acids." [PSI:XL]

property_value

specificities: "(Thy)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00048 nucleic acid reactive ! nucleic acid reactive

2.151. XLMOD:00135 azido-methylcoumarin

Table 153. Term [XLMOD:00135]

id

XLMOD:00135

name

azido-methylcoumarin

def

"A photoreactive azido-methylcoumarin group." [PSI:XL]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.152. XLMOD:00136 perfluoroaryl azide

Table 154. Term [XLMOD:00136]

id

XLMOD:00136

name

perfluoroaryl azide

def

"A photoreactive perfluoroaryl azide group." [PSI:XL]

is_a

XLMOD:00114 aryl azide ! aryl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.153. XLMOD:00137 diazo group

Table 155. Term [XLMOD:00137]

id

XLMOD:00137

name

diazo group

def

"A photoreactive diazo (R1R2C=N=N) group." [PSI:XL]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.154. XLMOD:00138 carboxyl

Table 156. Term [XLMOD:00138]

id

XLMOD:00138

name

carboxyl

def

"A reactive group (-COOH) that reacts with primary amine (-NH2) groups." [PSI:XL]

property_value

specificities: "(K,N,Q,R,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.155. XLMOD:00139 hydroxymethyl phosphine

Table 157. Term [XLMOD:00139]

id

XLMOD:00139

name

hydroxymethyl phosphine

def

"A reactive group that reacts with amine groups." [PSI:XL]

property_value

specificities: "(K,N,Q,R,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.156. XLMOD:00140 vinyl sulfone

Table 158. Term [XLMOD:00140]

id

XLMOD:00140

name

vinyl sulfone

def

"A reactive group that reacts with hydroxyl groups." [PSI:XL]

property_value

specificities: "(C,K,N,Q,R,S,T,Y)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

2.157. XLMOD:00141 carbonyl

Table 159. Term [XLMOD:00141]

id

XLMOD:00141

name

carbonyl

def

"A reactive group (C=O)that reacts with hydrazines (N2H4)." [PSI:XL]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00062 hydrazine reactive ! hydrazine reactive

2.158. XLMOD:00142 phenylglyoxal

Table 160. Term [XLMOD:00142]

id

XLMOD:00142

name

phenylglyoxal

def

"An arginine-specific reactive group." [PSI:XL]

property_value

specificities: "®" xsd:string

is_a

XLMOD:00115 glyoxal ! glyoxal

2.159. XLMOD:00143 hydrazone

Table 161. Term [XLMOD:00143]

id

XLMOD:00143

name

hydrazone

def

"A hydrazone reactive group (C=NH-NHR) that reacts with carbonyls." [PSI:XL]

property_value

specificities: "(D,E,Protein C-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

2.160. XLMOD:00144 S-acetyl

Table 162. Term [XLMOD:00144]

id

XLMOD:00144

name

S-acetyl

def

"A S-acetyl group." [PSI:XL]

comment

Used to incorporate sulfhydryl (-SH) groups into proteins as part of a two-step or heterobifunctional crosslinking strategy.

synonym

"SAT" EXACT []

is_a

XLMOD:00100 reactive group ! reactive group

2.161. XLMOD:00145 aryl halide

Table 163. Term [XLMOD:00145]

id

XLMOD:00145

name

aryl halide

def

"An aryl halide group (Ar-halogen) that reacts with primary amines." [PSI:XL]

property_value

specificities: "(K,N,Q,R,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.162. XLMOD:00146 dimethylether

Table 164. Term [XLMOD:00146]

id

XLMOD:00146

name

dimethylether

def

"A dimethylether (Ch3-O-CH3) reactive group that reacts with carboxyl groups." [PSI:XL]

property_value

specificities: "(D,E)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.163. XLMOD:00147 photocleavable

Table 165. Term [XLMOD:00147]

id

XLMOD:00147

name

photocleavable

def

"Indicates that a reactive group is photocleavable." [PSI:XL]

is_a

XLMOD:00108 photoreactive ! photoreactive

2.164. XLMOD:00148 nitrobenzylester

Table 166. Term [XLMOD:00148]

id

XLMOD:00148

name

nitrobenzylester

def

"A photocleavable group." [PSI:XL]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_cleavable XLMOD:00147 photocleavable ! photocleavable

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.165. XLMOD:00149 photoactivatable

Table 167. Term [XLMOD:00149]

id

XLMOD:00149

name

photoactivatable

def

"Indicates that a reactive group is photoactivatable." [PSI:XL]

is_a

XLMOD:00108 photoreactive ! photoreactive

2.166. XLMOD:00150 tetrafluorophenyl ester

Table 168. Term [XLMOD:00150]

id

XLMOD:00150

name

tetrafluorophenyl ester

def

"Tetrafluorophenyl (TFP, F4-Ph) ester." [PMID:22641729]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.167. XLMOD:00151 pentylamine

Table 169. Term [XLMOD:00151]

id

XLMOD:00151

name

pentylamine

def

"A pentylamine (CH3(CH2)4-NH2) reactive group that reacts with carboxyl groups." [PSI:XL]

property_value

specificities: "(D,E)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.168. XLMOD:00152 Biotin

Table 170. Term [XLMOD:00152]

id

XLMOD:00152

name

Biotin

def

"A biotin reactive group that reacts with avidin, streptavidin or neutravidin." [PSI:XL]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00072 avidin reactive ! avidin reactive

2.169. XLMOD:00153 chloroethyl

Table 171. Term [XLMOD:00153]

id

XLMOD:00153

name

chloroethyl

def

"A reactive group that reacts with guanin." [PSI:XL]

is_a

XLMOD:00100 reactive group ! reactive group

property_value

baseSpecificities: "(Guanine)" xsd:string

property_value

secondaryBaseSpecificities: "(Adenine, Cytosine)" xsd:string

2.170. XLMOD:00154 imino

Table 172. Term [XLMOD:00154]

id

XLMOD:00154

name

imino

def

"An imino (R1R2-C=N-R3) reactive group that reacts with primary amines." [PSI:XL]

property_value

specificities: "(D,E,K,Protein N-term)" xsd:string

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.171. XLMOD:00155 acyl chloride

Table 173. Term [XLMOD:00155]

id

XLMOD:00155

name

acyl chloride

def

"An acyl chloride (R-CO-Cl) reactive group that reacts with alcohol, phenol, thiol and amines." [PMID:21557289]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06500 secondary amine reactive ! secondary amine reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.172. XLMOD:00156 sulfonyl chloride

Table 174. Term [XLMOD:00156]

id

XLMOD:00156

name

sulfonyl chloride

def

"A sulfonyl chloride (R-SO2-Cl) reactive group." [PMID:21557289]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06500 secondary amine reactive ! secondary amine reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.173. XLMOD:00157 benzofurazan

Table 175. Term [XLMOD:00157]

id

XLMOD:00157

name

benzofurazan

def

"A benzofurazan (2,1,3-benzoxadiazole) reactive group." [PMID:21557289]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.174. XLMOD:00158 halobenzofurazan

Table 176. Term [XLMOD:00158]

id

XLMOD:00158

name

halobenzofurazan

def

"A halobenzofurazan (2,1,3-benzoxadiazole) reactive group with a halogen (-F, -Cl) modification." [PMID:21557289]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.175. XLMOD:00159 hydrazine

Table 177. Term [XLMOD:00159]

id

XLMOD:00159

name

hydrazine

def

"A hydrazine (R-NHNH2-) reactive group." [PMID:21557289]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.176. XLMOD:00160 TAD

Table 178. Term [XLMOD:00160]

id

XLMOD:00160

name

TAD

def

"A 4-substituted 1,2,4-triazoline-3,5-dione (TAD) reactive group." [PMID:21557289]

synonym

"1,2,4-triazoline-3,5-dione" EXACT []

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:06514 Vitamin D metabolite reactive ! Vitamin D metabolite reactive

2.177. XLMOD:00161 boronic acid

Table 179. Term [XLMOD:00161]

id

XLMOD:00161

name

boronic acid

def

"An (alkyl- or aryl-substituted) boronic acid (R-B-(OH)2) reactive group." [PMID:21557289]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06506 carbohydrate reactive ! carbohydrate reactive

2.178. XLMOD:00162 isothiocyanate

Table 180. Term [XLMOD:00162]

id

XLMOD:00162

name

isothiocyanate

def

"An isothiocyanate (-N=C=S) reactive group." [PMID:21557289]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06500 secondary amine reactive ! secondary amine reactive

2.179. XLMOD:00163 chloroformate reactive group

Table 181. Term [XLMOD:00163]

id

XLMOD:00163

name

chloroformate reactive group

def

"A chloroformate (Cl-CO-OR) reactive group." [PMID:21557289]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06500 secondary amine reactive ! secondary amine reactive

2.180. XLMOD:00164 carabamate

Table 182. Term [XLMOD:00164]

id

XLMOD:00164

name

carabamate

def

"A carbamate (O-CO-N) reactive group." [PMID:21557289]

synonym

"urethane" EXACT []

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06500 secondary amine reactive ! secondary amine reactive

2.181. XLMOD:00165 sulfonate

Table 183. Term [XLMOD:00165]

id

XLMOD:00165

name

sulfonate

def

"A sulfonate (R1-SO2O-R2) reactive group." [PMID:21557289]

synonym

"sulphonate" EXACT []

synonym

"sulfonic ester" EXACT []

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.182. XLMOD:00166 anhydride

Table 184. Term [XLMOD:00166]

id

XLMOD:00166

name

anhydride

def

"An anhydride (R1-CO-O-CO-R2) reactive group." [PMID:21557289]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

2.183. XLMOD:00167 carboxyl reactive group

Table 185. Term [XLMOD:00167]

id

XLMOD:00167

name

carboxyl reactive group

def

"Reactive group (-COOH) that reacts with amino (-NH2) groups." [PSI:XL]

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! amine reactive

2.184. XLMOD:00168 benzyl bromide reactive group

Table 186. Term [XLMOD:00168]

id

XLMOD:00168

name

benzyl bromide reactive group

def

"A benzyl bromide (C6H5CH2Br) reactive group." [PMID:21557289]

synonym

"Bn-Br" EXACT []

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06521 phophate reactive ! phosphate reactive

2.185. XLMOD:00169 sodium dithionite cleavable

Table 187. Term [XLMOD:00169]

id

XLMOD:00169

name

sodium dithionite cleavable

def

"Indicates that a cross-linker is chemically cleavable by sodium dithionite." [PSI:XL]

is_a

XLMOD:00017 chemically cleavable ! chemically cleavable

2.186. XLMOD:00170 benzoyl bromide

Table 188. Term [XLMOD:00170]

id

XLMOD:00170

name

benzoyl bromide

def

"A benzoyl bromide (C6H5COBr) reactive group." [PMID:21557289]

synonym

"Bz-Br" EXACT []

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06521 phophate reactive ! phosphate reactive

2.187. XLMOD:00171 Ortho-phthalaldehyde

Table 189. Term [XLMOD:00171]

id

XLMOD:00171

name

Ortho-phthalaldehyde

def

"A lysine-specific reactive group." [PSI:XL]

synonym

"OPA" EXACT []

property_value

specificities: "(K)" xsd:string

is_a

XLMOD:00116 aldehyde group ! aldehyde

2.188. XLMOD:00172 IMAC-enrichable

Table 190. Term [XLMOD:00172]

id

XLMOD:00172

name

IMAC-enrichable

def

"Indicates a cross-linker facilitating IMAC (immobilized metal affinity chromatography) enrichment." [PSI:XL]

is_a

XLMOD:00019 enrichable ! enrichable

2.189. XLMOD:00173 phosphonic acid

Table 191. Term [XLMOD:00173]

id

XLMOD:00173

name

phosphonic acid

def

"A phosphonic acid handle, which can be used for IMAC-enrichment." [PSI:XL]

is_a

XLMOD:00050 handle ! handle

is_a

XLMOD:00172 IMAC-enrichable ! IMAC-enrichable

2.190. XLMOD:01000 hydrolyzed BS3

Table 192. Term [XLMOD:01000]

id

XLMOD:01000

name

hydrolyzed BS3

def

"Hydrolyzed bis(sulfosuccinimidyl)suberate." [PSI:XL]

property_value

deadEndFormula: "C8 H12 O3" xsd:string

property_value

monoIsotopicMass: "156.07864431" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02000 BS3 ! BS3

2.191. XLMOD:01001 ammonium amidated BS3

Table 193. Term [XLMOD:01001]

id

XLMOD:01001

name

ammonium amidated BS3

def

"Ammonium amidated bis(sulfosuccinimidyl)suberate." [PSI:XL]

property_value

deadEndFormula: "C8 H13 O2 N" xsd:string

property_value

monoIsotopicMass: "155.094628715" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02000 BS3 ! BS3

2.192. XLMOD:01002 hydrolyzed DSS

Table 194. Term [XLMOD:01002]

id

XLMOD:01002

name

hydrolyzed DSS

def

"Hydrolyzed disuccinimidyl suberate." [PSI:XL]

property_value

deadEndFormula: "C8 H12 O3" xsd:string

property_value

monoIsotopicMass: "156.07864431" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02001 DSS ! DSS

2.193. XLMOD:01003 ammonium amidated DSS

Table 195. Term [XLMOD:01003]

id

XLMOD:01003

name

ammonium amidated DSS

def

"Ammonium amidated disuccinimidyl suberate." [PSI:XL]

property_value

deadEndFormula: "C8 H13 O2 N" xsd:string

property_value

monoIsotopicMass: "155.094628715" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02001 DSS ! DSS

2.194. XLMOD:01004 hydrolyzed DSS-d4

Table 196. Term [XLMOD:01004]

id

XLMOD:01004

name

hydrolyzed DSS-d4

def

"Deuterium labelled hydrolyzed disuccinimidyl 2,2,7,7-suberate." [PSI:XL]

property_value

monoIsotopicMass: "160.1037416836" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02002 DSS-d4 ! DSS-d4

2.195. XLMOD:01005 ammonium amidated DSS-d4

Table 197. Term [XLMOD:01005]

id

XLMOD:01005

name

ammonium amidated DSS-d4

def

"Deuterium labelled ammonium amidated disuccinimidyl 2,2,7,7-suberate." [PSI:XL]

property_value

monoIsotopicMass: "159.1197260886" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02002 DSS-d4 ! DSS-d4

2.196. XLMOD:01006 hydrolyzed DSS-d12

Table 198. Term [XLMOD:01006]

id

XLMOD:01006

name

hydrolyzed DSS-d12

def

"Deuterium labelled hydrolyzed disuccinimidyl 2,2,3,3,4,4,5,5,6,6,7,7-suberate." [PSI:XL]

property_value

monoIsotopicMass: "168.153965238" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02003 DSS-d12 ! DSS-d12

2.197. XLMOD:01007 ammonium amidated DSS-d12

Table 199. Term [XLMOD:01007]

id

XLMOD:01007

name

ammonium amidated DSS-d12

def

"Deuterium labelled ammonium amidated disuccinimidyl 2,2,3,3,4,4,5,5,6,6,7,7-suberate." [PSI:XL]

property_value

monoIsotopicMass: "167.169949643" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02003 DSS-d12 ! DSS-d12

2.198. XLMOD:01008 hydrolyzed BS3-d4

Table 200. Term [XLMOD:01008]

id

XLMOD:01008

name

hydrolyzed BS3-d4

def

"Deuterium labelled hydrolyzed bis(sulfosuccinimidyl) 2,2,7,7-suberate." [PSI:XL]

property_value

deadEndFormula: "C8 D4 H8 O3" xsd:string

property_value

monoIsotopicMass: "160.103751286" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02004 BS3-d4 ! BS3-d4

2.199. XLMOD:01009 ammonium amidated BS3-d4

Table 201. Term [XLMOD:01009]

id

XLMOD:01009

name

ammonium amidated BS3-d4

def

"Deuterium labelled ammonium amidated bis(sulfosuccinimidyl) 2,2,7,7-suberate." [PSI:XL]

property_value

deadEndFormula: "C8 D4 H9 N1 O2" xsd:string

property_value

monoIsotopicMass: "159.119735691" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02004 BS3-d4 ! BS3-d4

2.200. XLMOD:01010 hydrolyzed BS2G

Table 202. Term [XLMOD:01010]

id

XLMOD:01010

name

hydrolyzed BS2G

def

"Hydrolyzed bis(sulfosuccinimidyl) glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 H6 O3" xsd:string

property_value

monoIsotopicMass: "114.0316941" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02005 BS2G ! BS2G

2.201. XLMOD:01011 ammonium amidated BS2G

Table 203. Term [XLMOD:01011]

id

XLMOD:01011

name

ammonium amidated BS2G

def

"Ammonium amidated bis(sulfosuccinimidyl) glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 H7 N1 O2" xsd:string

property_value

monoIsotopicMass: "113.047678505" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02005 BS2G ! BS2G

2.202. XLMOD:01012 hydrolyzed DSG

Table 204. Term [XLMOD:01012]

id

XLMOD:01012

name

hydrolyzed DSG

def

"Hydrolyzed disuccinimidyl glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 H6 O3" xsd:string

property_value

monoIsotopicMass: "114.0316941" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02006 DSG ! DSG

2.203. XLMOD:01013 ammonium amidated DSG

Table 205. Term [XLMOD:01013]

id

XLMOD:01013

name

ammonium amidated DSG

def

"Ammonium amidated disuccinimidyl glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 H7 N1 O2" xsd:string

property_value

monoIsotopicMass: "113.047678505" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02006 DSG ! DSG

2.204. XLMOD:01014 hydrolyzed DSG-d4

Table 206. Term [XLMOD:01014]

id

XLMOD:01014

name

hydrolyzed DSG-d4

def

"Deuterium labelled hydrolyzed disuccinimidyl 2,2,4,4-glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 D4 H2 O3" xsd:string

property_value

monoIsotopicMass: "118.0567741" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02007 DSG-d4 ! DSG-d4

2.205. XLMOD:01015 ammonium amidated DSG-d4

Table 207. Term [XLMOD:01015]

id

XLMOD:01015

name

ammonium amidated DSG-d4

def

"Deuterium labelled ammonium amidated disuccinimidyl 2,2,4,4-glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 D4 H3 N1 O2" xsd:string

property_value

monoIsotopicMass: "117.072758505" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02007 DSG-d4 ! DSG-d4

2.206. XLMOD:01016 hydrolyzed BS2G-d4

Table 208. Term [XLMOD:01016]

id

XLMOD:01016

name

hydrolyzed BS2G-d4

def

"Deuterium labelled hydrolyzed bis(sulfosuccinimidyl) 2,2,4,4-glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 D4 H2 O3" xsd:string

property_value

monoIsotopicMass: "118.056801076" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02008 BS2G-d4 ! BS2G-d4

2.207. XLMOD:01017 ammonium amidated BS2G-d4

Table 209. Term [XLMOD:01017]

id

XLMOD:01017

name

ammonium amidated BS2G-d4

def

"Deuterium labelled ammonium amidated bis(sulfosuccinimidyl) 2,2,4,4-glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 D4 H3 N1 O2" xsd:string

property_value

monoIsotopicMass: "117.072785481" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02008 BS2G-d4 ! BS2G-d4

2.208. XLMOD:01018 BDP-NHP-stump

Table 210. Term [XLMOD:01018]

id

XLMOD:01018

name

BDP-NHP-stump

def

"Biotin Aspartate Proline n-hydroxyphthalimide-stump." [PMID:23413883, PMID:26235782, PMID:27089058]

property_value

monoIsotopicMass: "197.032422395" xsd:double

is_a

XLMOD:00002 cross-linker related chemical modification ! cross-linker related chemical modification

relationship

is_side_product_of XLMOD:02011 BDP-NHP ! BDP-NHP

2.209. XLMOD:01019 hydrolyzed DSP

Table 211. Term [XLMOD:01019]

id

XLMOD:01019

name

hydrolyzed DSP

def

"Hydrolyzed dithiobis[succinimidyl propionate." [PSI:XL]

property_value

deadEndFormula: "C6 H8 O3 S2" xsd:string

property_value

monoIsotopicMass: "191.99148557" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02029 DSP ! DSP

2.210. XLMOD:01020 ammonium amidated DSP

Table 212. Term [XLMOD:01020]

id

XLMOD:01020

name

ammonium amidated DSP

def

"Ammonium amidated dithiobis[succinimidyl propionate." [PSI:XL]

property_value

deadEndFormula: "C6 H9 N1 O2 S2" xsd:string

property_value

monoIsotopicMass: "191.007469975" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02029 DSP ! DSP

2.211. XLMOD:01021 hydrolyzed EGS

Table 213. Term [XLMOD:01021]

id

XLMOD:01021

name

hydrolyzed EGS

def

"Hydrolyzed ethylene glycolbis(succinimidylsuccinate)." [PSI:XL]

property_value

deadEndFormula: "C10 H12 O7" xsd:string

property_value

monoIsotopicMass: "244.0583027" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02034 EGS ! EGS

2.212. XLMOD:01022 ammonium amidated EGS

Table 214. Term [XLMOD:01022]

id

XLMOD:01022

name

ammonium amidated EGS

def

"Ammonium amidated ethylene glycolbis(succinimidylsuccinate)." [PSI:XL]

property_value

deadEndFormula: "C10 H13 N1 O6" xsd:string

property_value

monoIsotopicMass: "243.074287105" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02034 EGS ! EGS

2.213. XLMOD:01023 hydrolyzed BiPS

Table 215. Term [XLMOD:01023]

id

XLMOD:01023

name

hydrolyzed BiPS

def

"Hydrolyzed bimane bisthiopropionic acid N-succinimidyl ester." [PMID:18838738]

property_value

deadEndFormula: "C16 H18 N2 O5 S2" xsd:string

property_value

monoIsotopicMass: "382.06571" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02040 BiPS ! BiPS

2.214. XLMOD:01024 ammonium amidated BiPS

Table 216. Term [XLMOD:01024]

id

XLMOD:01024

name

ammonium amidated BiPS

def

"Ammonium amidated bimane bisthiopropionic acid N-succinimidyl ester." [PMID:18838738]

property_value

deadEndFormula: "C16 H18 N3 O4 S2" xsd:string

property_value

monoIsotopicMass: "381.08169" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02040 BiPS ! BiPS

2.215. XLMOD:01025 hydrolyzed CBDPS

Table 217. Term [XLMOD:01025]

id

XLMOD:01025

name

hydrolyzed CBDPS

def

"Hydrolyzed cyanurbiotindipropionylsuccinimide." [PMID:20622150]

property_value

deadEndFormula: "C19 H25 N7 O5 S3" xsd:string

property_value

monoIsotopicMass: "527.10738" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02041 formaldehyde ! CBDPS

2.216. XLMOD:01026 ammonium amidated CBDPS

Table 218. Term [XLMOD:01026]

id

XLMOD:01026

name

ammonium amidated CBDPS

def

"Ammonium amidated cyanurbiotindipropionylsuccinimide." [PMID:20622150]

property_value

deadEndFormula: "C19 H25 N8 O4 S3" xsd:string

property_value

monoIsotopicMass: "526.12336" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02041 formaldehyde ! CBDPS

2.217. XLMOD:01027 hydrolyzed DSA

Table 219. Term [XLMOD:01027]

id

XLMOD:01027

name

hydrolyzed DSA

def

"Hydrolyzed disuccinimidyladipic acid." [PSI:XL]

property_value

deadEndFormula: "C6 H8 O3" xsd:string

property_value

monoIsotopicMass: "128.04680" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02044 DNBDPS ! DSA

2.218. XLMOD:01028 ammonium amidated DSA

Table 220. Term [XLMOD:01028]

id

XLMOD:01028

name

ammonium amidated DSA

def

"Ammonium amidated disuccinimidyladipic acid." [PSI:XL]

property_value

deadEndFormula: "C6 H9 N1 O2" xsd:string

property_value

monoIsotopicMass: "127.06278" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02044 DNBDPS ! DSA

2.219. XLMOD:01029 hydrolyzed DNBDPS

Table 221. Term [XLMOD:01029]

id

XLMOD:01029

name

hydrolyzed DNBDPS

def

"Hydrolyzed DNBDPS." [PMID:20109223]

property_value

deadEndFormula: "C12 H10 N2 O7 S2" xsd:string

property_value

monoIsotopicMass: "357.99294" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

has_handle XLMOD:00054 DNB ! DNB

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02045 TEABS ! DNBDPS

2.220. XLMOD:01030 ammonium amidated DNBDPS

Table 222. Term [XLMOD:01030]

id

XLMOD:01030

name

ammonium amidated DNBDPS

def

"Ammonium amidated DNBDPS." [PMID:20109223]

property_value

deadEndFormula: "C12 H10 N3 O6 S2" xsd:string

property_value

monoIsotopicMass: "357.00892" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

has_handle XLMOD:00054 DNB ! DNB

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02045 TEABS ! DNBDPS

2.221. XLMOD:01031 hydrolyzed TEABS

Table 223. Term [XLMOD:01031]

id

XLMOD:01031

name

hydrolyzed TEABS

def

"Hydrolyzed TEABS cross-linking reagent." [PMID:20109223]

property_value

deadEndFormula: "C28 H41 N5 O12 S1" xsd:string

property_value

monoIsotopicMass: "671.24724" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02046 CLIP ! TEABS

2.222. XLMOD:01032 ammonium amidated TEABS

Table 224. Term [XLMOD:01032]

id

XLMOD:01032

name

ammonium amidated TEABS

def

"Ammonium amidated TEABS cross-linking reagent." [PMID:20109223]

property_value

deadEndFormula: "C28 H41 N6 O11 S1" xsd:string

property_value

monoIsotopicMass: "670.26322" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02046 CLIP ! TEABS

2.223. XLMOD:01033 hydrolyzed DTSSP-d8

Table 225. Term [XLMOD:01033]

id

XLMOD:01033

name

hydrolyzed DTSSP-d8

def

"Hydrolyzed deuterium labelled 3,3'-Dithiobis[sulfosuccinimidylpropionate]." [PMID:10975572, PMID:18510349]

property_value

deadEndFormula: "C6 D8 O3 S2" xsd:string

property_value

monoIsotopicMass: "191.99149" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02049 EGS-d12 ! DTSSP

2.224. XLMOD:01034 ammonium amidated DTSSP-d8

Table 226. Term [XLMOD:01034]

id

XLMOD:01034

name

ammonium amidated DTSSP-d8

def

"Ammonium amidated deuterium labelled 3,3'-Dithiobis[sulfosuccinimidylpropionate]." [PMID:10975572, PMID:18510349]

property_value

deadEndFormula: "C6 D8 H1 N1 O2 S2" xsd:string

property_value

monoIsotopicMass: "191.00747" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02049 EGS-d12 ! DTSSP

2.225. XLMOD:01035 hydrolyzed DSP-d8

Table 227. Term [XLMOD:01035]

id

XLMOD:01035

name

hydrolyzed DSP-d8

def

"Hydrolyzed deuterium-labelled dithiobis[succinimidyl propionate." [PSI:XL]

property_value

deadEndFormula: "C6 D8 O3 S2" xsd:string

property_value

monoIsotopicMass: "200.04165" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02030 DSP-d8 ! DSP-d8

2.226. XLMOD:01036 ammonium amidated DSP-d8

Table 228. Term [XLMOD:01036]

id

XLMOD:01036

name

ammonium amidated DSP-d8

def

"Ammonium amidated deuterium-labelled dithiobis[succinimidyl propionate." [PSI:XL]

property_value

deadEndFormula: "C6 D8 H1 N1 O2 S2" xsd:string

property_value

monoIsotopicMass: "199.05763" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02030 DSP-d8 ! DSP-d8

2.227. XLMOD:01037 hydrolyzed Sulfo-EGS

Table 229. Term [XLMOD:01037]

id

XLMOD:01037

name

hydrolyzed Sulfo-EGS

def

"Hydrolyzed ethylene glycolbis(sulfosuccinimidylsuccinate)." [PSI:XL]

property_value

deadEndFormula: "C10 H12 O7" xsd:string

property_value

monoIsotopicMass: "244.0583028" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02035 Sulfo-EGS ! Sulfo-EGS

2.228. XLMOD:01038 ammonium amidated Sulfo-EGS

Table 230. Term [XLMOD:01038]

id

XLMOD:01038

name

ammonium amidated Sulfo-EGS

def

"Ammonium amidated ethylene glycolbis(sulfosuccinimidylsuccinate)." [PSI:XL]

property_value

deadEndFormula: "C10 H12 N1 O6" xsd:string

property_value

monoIsotopicMass: "243.07428" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02035 Sulfo-EGS ! Sulfo-EGS

2.229. XLMOD:01039 hydrolyzed EGS-d12

Table 231. Term [XLMOD:01039]

id

XLMOD:01039

name

hydrolyzed EGS-d12

def

"Deuterium labelled hydrolyzed ethylene glycolbis(succinimidylsuccinate)." [PSI:XL]

property_value

deadEndFormula: "C10 D12 O7" xsd:string

property_value

monoIsotopicMass: "256.13403" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02050 Sulfo-EGS-d12 ! EGS-d12

2.230. XLMOD:01040 ammonium amidated EGS-d12

Table 232. Term [XLMOD:01040]

id

XLMOD:01040

name

ammonium amidated EGS-d12

def

"Deuterium labelled ammonium amidated ethylene glycolbis(succinimidylsuccinate)." [PSI:XL]

property_value

deadEndFormula: "C10 D12 N1 O6" xsd:string

property_value

monoIsotopicMass: "255.15001" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02050 Sulfo-EGS-d12 ! EGS-d12

2.231. XLMOD:01041 hydrolyzed Sulfo-EGS-d12

Table 233. Term [XLMOD:01041]

id

XLMOD:01041

name

hydrolyzed Sulfo-EGS-d12

def

"Deuterium labelled hydrolyzed ethylene glycolbis(sulfosuccinimidylsuccinate)." [PSI:XL]

property_value

deadEndFormula: "C10 D12 O7" xsd:string

property_value

monoIsotopicMass: "256.13403" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02050 Sulfo-EGS-d12 ! Sulfo-EGS-d12

2.232. XLMOD:01042 ammonium amidated Sulfo-EGS-d12

Table 234. Term [XLMOD:01042]

id

XLMOD:01042

name

ammonium amidated Sulfo-EGS-d12

def

"Deuterium labelled ammonium amidated ethylene glycolbis(sulfosuccinimidylsuccinate)." [PSI:XL]

property_value

deadEndFormula: "C10 D12 N1 O6" xsd:string

property_value

monoIsotopicMass: "255.15001" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02050 Sulfo-EGS-d12 ! Sulfo-EGS-d12

2.233. XLMOD:01043 hydrolyzed DSA-13C6

Table 235. Term [XLMOD:01043]

id

XLMOD:01043

name

hydrolyzed DSA-13C6

def

"Hydrolyzed 13C labelled disuccinimidyladipic acid." [PSI:XL]

property_value

deadEndFormula: "13C6 H8 O3" xsd:string

property_value

monoIsotopicMass: "134.06696" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02054 CBDPS-d8 ! DSA-13C6

2.234. XLMOD:01044 ammonium amidated DSA-13C6

Table 236. Term [XLMOD:01044]

id

XLMOD:01044

name

ammonium amidated DSA-13C6

def

"Ammonium amidated 13C labelled disuccinimidyladipic acid." [PSI:XL]

property_value

deadEndFormula: "13C6 H9 N1 O2" xsd:string

property_value

monoIsotopicMass: "133.08294" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02054 CBDPS-d8 ! DSA-13C6

2.235. XLMOD:01045 hydrolyzed CBDPS-d8

Table 237. Term [XLMOD:01045]

id

XLMOD:01045

name

hydrolyzed CBDPS-d8

def

"Deuterium labelled hydrolyzed cyanurbiotindipropionylsuccinimide." [PMID:20622150]

property_value

deadEndFormula: "C19 D8 H17 N7 O5 S3" xsd:string

property_value

monoIsotopicMass: "535.15754" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02055 CBDPSS ! CBDPS-d8

2.236. XLMOD:01046 ammonium amidated CBDPS-d8

Table 238. Term [XLMOD:01046]

id

XLMOD:01046

name

ammonium amidated CBDPS-d8

def

"Deuterium labelled ammonium amidated cyanurbiotindipropionylsuccinimide." [PMID:20622150]

property_value

deadEndFormula: "C19 D8 H17 N8 O4 S3" xsd:string

property_value

monoIsotopicMass: "534.17352" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02055 CBDPSS ! CBDPS-d8

2.237. XLMOD:01047 hydrolyzed CBDPSS

Table 239. Term [XLMOD:01047]

id

XLMOD:01047

name

hydrolyzed CBDPSS

def

"Hydrolyzed cyanurbiotindimercaptopropionylsulfosuccinimide." [PMID:20622150]

property_value

deadEndFormula: "C19 H25 N7 O5 S3" xsd:string

property_value

monoIsotopicMass: "527.10738" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02056 CBDPSS-d8 ! CBDPSS

2.238. XLMOD:01048 ammonium amidated CBDPSS

Table 240. Term [XLMOD:01048]

id

XLMOD:01048

name

ammonium amidated CBDPSS

def

"Ammonium amidated cyanurbiotindimercaptopropionylsulfosuccinimide." [PMID:20622150]

property_value

deadEndFormula: "C19 H25 N8 O4 S3" xsd:string

property_value

monoIsotopicMass: "526.12336" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02056 CBDPSS-d8 ! CBDPSS

2.239. XLMOD:01049 hydrolyzed CBDPSS-d8

Table 241. Term [XLMOD:01049]

id

XLMOD:01049

name

hydrolyzed CBDPSS-d8

def

"Deuterium labelled hydrolyzed cyanurbiotindimercaptopropionylsulfosuccinimide." [PMID:20622150]

property_value

deadEndFormula: "C19 D8 H17 N7 O5 S3" xsd:string

property_value

monoIsotopicMass: "535.15754" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02057 SDH ! CBDPSS-d8

2.240. XLMOD:01050 ammonium amidated CBDPSS-d8

Table 242. Term [XLMOD:01050]

id

XLMOD:01050

name

ammonium amidated CBDPSS-d8

def

"Deuterium labelled ammonium amidated cyanurbiotindimercaptopropionylsulfosuccinimide." [PMID:20622150]

property_value

deadEndFormula: "C19 D8 H17 N8 O4 S3" xsd:string

property_value

monoIsotopicMass: "534.17352" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02057 SDH ! CBDPSS-d8

2.241. XLMOD:01051 hydrolyzed BS3-d12

Table 243. Term [XLMOD:01051]

id

XLMOD:01051

name

hydrolyzed BS3-d12

def

"Deuterium labelled hydrolyzed bis(sulfosuccinimidyl) 2,2,3,3,4,4,5,5,6,6,7,7-suberate." [PSI:XL]

property_value

deadEndFormula: "C8 D12 O3" xsd:string

property_value

monoIsotopicMass: "168.15437" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02064 DSG-d6 ! BS3-d12

2.242. XLMOD:01052 ammonium amidated BS3-d12

Table 244. Term [XLMOD:01052]

id

XLMOD:01052

name

ammonium amidated BS3-d12

def

"Deuterium labelled ammonium amidated bis(sulfosuccinimidyl) 2,2,3,3,4,4,5,5,6,6,7,7-suberate." [PSI:XL]

property_value

deadEndFormula: "C8 D12 H1 N1 O2" xsd:string

property_value

monoIsotopicMass: "167.17035" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02064 DSG-d6 ! BS3-d12

2.243. XLMOD:01053 hydrolyzed DSG-d6

Table 245. Term [XLMOD:01053]

id

XLMOD:01053

name

hydrolyzed DSG-d6

def

"Deuterium labelled hydrolyzed disuccinimidyl 2,2,3,3,4,4-glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 D6 O3" xsd:string

property_value

monoIsotopicMass: "120.07483" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02065 BS2G-d6 ! DSG-d6

2.244. XLMOD:01054 ammonium amidated DSG-d6

Table 246. Term [XLMOD:01054]

id

XLMOD:01054

name

ammonium amidated DSG-d6

def

"Deuterium labelled ammonium amidated disuccinimidyl 2,2,3,3,4,4-glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 D6 H1 N1 O2" xsd:string

property_value

monoIsotopicMass: "119.09081" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02065 BS2G-d6 ! DSG-d6

2.245. XLMOD:01055 hydrolyzed BS2G-d6

Table 247. Term [XLMOD:01055]

id

XLMOD:01055

name

hydrolyzed BS2G-d6

def

"Deuterium labelled hydrolyzed bis(sulfosuccinimidyl) 2,2,3,3,4,4-glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 D6 O3" xsd:string

property_value

monoIsotopicMass: "120.06877" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02066 SATA ! BS2G-d6

2.246. XLMOD:01056 ammonium amidated BS2G-d6

Table 248. Term [XLMOD:01056]

id

XLMOD:01056

name

ammonium amidated BS2G-d6

def

"Deuterium labelled ammonium amidated bis(sulfosuccinimidyl) 2,2,3,3,4,4-glutarate." [PSI:XL]

property_value

deadEndFormula: "C5 D6 H1 N1 O2" xsd:string

property_value

monoIsotopicMass: "119.08475" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02066 SATA ! BS2G-d6

2.247. XLMOD:01057 hydrolyzed SDH

Table 249. Term [XLMOD:01057]

id

XLMOD:01057

name

hydrolyzed SDH

def

"Hydrolyzed Suberic acid 1,8-dihydrazide." [PMID:24938783]

property_value

deadEndFormula: "C8 H16 N4 O1" xsd:string

property_value

monoIsotopicMass: "184.13241119" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02058 SDH-d12 ! SDH

2.248. XLMOD:01058 hydrolyzed SDH-d12

Table 250. Term [XLMOD:01058]

id

XLMOD:01058

name

hydrolyzed SDH-d12

def

"Deuterium labelled hydrolyzed suberic acid 1,8-dihydrazide." [PMID:24938783]

property_value

deadEndFormula: "C8 D12 H4 N4 O1" xsd:string

property_value

monoIsotopicMass: "196.207732118" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02059 ADH ! SDH-d12

2.249. XLMOD:01059 hydrolyzed ADH

Table 251. Term [XLMOD:01059]

id

XLMOD:01059

name

hydrolyzed ADH

def

"Hydrolyzed adipic acid 1,6-dihydrazide." [PMID:24938783]

property_value

deadEndFormula: "C6 H12 N4 O1" xsd:string

property_value

monoIsotopicMass: "156.10111105" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02060 ADH-d8 ! ADH

2.250. XLMOD:01060 hydrolyzed ADH-d8

Table 252. Term [XLMOD:01060]

id

XLMOD:01060

name

hydrolyzed ADH-d8

def

"Deuterium labelled hydrolyzed adipic acid 1,6-dihydrazide." [PMID:24938783]

property_value

deadEndFormula: "C6 D8 H4 N4 O1" xsd:string

property_value

monoIsotopicMass: "164.151325002" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02060 ADH-d8 ! ADH-d8

2.251. XLMOD:01061 hydrolyzed GDH

Table 253. Term [XLMOD:01061]

id

XLMOD:01061

name

hydrolyzed GDH

def

"Hydrolyzed glutaric acid 1,5-dihydrazide." [PMID:24938783]

property_value

deadEndFormula: "C5 H10 N4 O1" xsd:string

property_value

monoIsotopicMass: "142.08546098" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02062 GDH-d6 ! GDH

2.252. XLMOD:01062 hydrolyzed GDH-d6

Table 254. Term [XLMOD:01062]

id

XLMOD:01062

name

hydrolyzed GDH-d6

def

"Deuterium labelled hydrolyzed glutaric acid 1,5-dihydrazide." [PMID:24938783]

property_value

deadEndFormula: "C5 D6 H4 N4 O1" xsd:string

property_value

monoIsotopicMass: "148.123121444" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02063 BS3-d12 ! GDH-d6

2.253. XLMOD:01063 hydrolyzed BCCL1

Table 255. Term [XLMOD:01063]

id

XLMOD:01063

name

hydrolyzed BCCL1

def

"Hydrolyzed bis-(N-hydroxysuccinimidyl) 3-amino-N-biotinoyl-1,5-pentanedioate." [PMID:19412923]

property_value

monoIsotopicMass: "355.12019" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02108 BCCL2 ! BCCL1

2.254. XLMOD:01064 hydrolyzed BCCL2

Table 256. Term [XLMOD:01064]

id

XLMOD:01064

name

hydrolyzed BCCL2

def

"Hydrolyzed bis-(N-hydroxysuccinimidyl) 5-amino-N-biotinoyl-1,9-nonanedioate." [PMID:19412923]

property_value

monoIsotopicMass: "411.18179" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02109 SBC ! BCCL2

2.255. XLMOD:01065 hydrolyzed IRCX

Table 257. Term [XLMOD:01065]

id

XLMOD:01065

name

hydrolyzed IRCX

def

"Hydrolyzed dibenzoyloxysuccinimidylethyl phosphate." [PMID:18517224]

property_value

monoIsotopicMass: "348.0" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02116 azide-DSG ! ICRX

2.256. XLMOD:01066 hydrolyzed azide-DSG

Table 258. Term [XLMOD:01066]

id

XLMOD:01066

name

hydrolyzed azide-DSG

def

"Hydrolyzed bis(succinimidyl)-3-azidomethyl glutarate." [PMID:20472459]

property_value

monoIsotopicMass: "229.0" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02118 JMV 3378 ! azide-DSG

2.257. XLMOD:01067 hydrolyzed JMV 3378

Table 259. Term [XLMOD:01067]

id

XLMOD:01067

name

hydrolyzed JMV 3378

def

"Hydrolyzed crosslinking reagent JMV 3378." [PMID:19902427]

property_value

monoIsotopicMass: "286.0" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02120 BuUrBu ! JMV 3378

2.258. XLMOD:01068 hydrolyzed BuTuGPG

Table 260. Term [XLMOD:01068]

id

XLMOD:01068

name

hydrolyzed BuTuGPG

def

"Hydrolyzed 4-[3-(2-{2-[(2,5-dioxo-pyrrolidin-1-yloxycarbonyl-methyl)-carbamoyl]-pyrrolidin-1-yl}-2-oxo-ethyl)-thioureido]-butyric acid 2,5-dioxo-pyrrolidin-1-yl ester." [PMID:19950134]

property_value

monoIsotopicMass: "1704.86" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02121 DPS ! BuTuGPG

2.259. XLMOD:01069 hydrolyzed BuUrBu

Table 261. Term [XLMOD:01069]

id

XLMOD:01069

name

hydrolyzed BuUrBu

def

"Hydrolyzed NHS-amino butyric acid-urea-amino butyric acid-NHS." [PMID:21157862]

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02122 SBBT ! BuUrBu

2.260. XLMOD:01070 hydrolyzed DEST

Table 262. Term [XLMOD:01070]

id

XLMOD:01070

name

hydrolyzed DEST

def

"Hydrolyzed diethylsuberthioimidate." [PMID:20795639, PMID:22460622]

property_value

deadEndFormula: "C8 H14 N2 O1" xsd:string

property_value

monoIsotopicMass: "154.11061312" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02129 DC4 ! DEST

2.261. XLMOD:01071 ammonium amidated DEST

Table 263. Term [XLMOD:01071]

id

XLMOD:01071

name

ammonium amidated DEST

def

"Ammonium amidated diethylsuberthioimidate." [PMID:20795639, PMID:22460622]

property_value

deadEndFormula: "C8 H15 N3" xsd:string

property_value

monoIsotopicMass: "153.126593" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02129 DC4 ! DEST

2.262. XLMOD:01072 thioesterized DEST

Table 264. Term [XLMOD:01072]

id

XLMOD:01072

name

thioesterized DEST

def

"Thioesterized diethylsuberthioimidate." [PMID:20795639, PMID:22460622]

property_value

deadEndFormula: "C10 H17 N1 O1 S1" xsd:string

property_value

monoIsotopicMass: "199.103084925" xsd:double

is_a

XLMOD:00098 thioesterization cross-linker related chemical modification ! thioesterization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00047 thioesterized ! thioesterized

relationship

is_side_product_of XLMOD:02129 DC4 ! DEST

2.263. XLMOD:01073 hydrolyzed BS(PEG)5

Table 265. Term [XLMOD:01073]

id

XLMOD:01073

name

hydrolyzed BS(PEG)5

def

"Hydrolyzed bis(sulfosuccinimidyl)suberate pentaethyleneglycol." [PSI:XL]

property_value

deadEndFormula: "C14 H24 O8" xsd:string

property_value

monoIsotopicMass: "320.1471147" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02198 BS(PEG)5 ! BS(PEG)5

2.264. XLMOD:01074 ammonium amidated BS(PEG)5

Table 266. Term [XLMOD:01074]

id

XLMOD:01074

name

ammonium amidated BS(PEG)5

def

"Ammonium amidated bis(sulfosuccinimidyl)suberate pentaethyleneglycol." [PSI:XL]

property_value

deadEndFormula: "C14 H27 N1 O7" xsd:string

property_value

monoIsotopicMass: "320.1471147" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02198 BS(PEG)5 ! BS(PEG)5

2.265. XLMOD:01075 hydrolyzed BSOCOES

Table 267. Term [XLMOD:01075]

id

XLMOD:01075

name

hydrolyzed BSOCOES

def

"Hydrolyzed bis(2-[Succinimidooxycarbonyloxy]ethyl) sulfone." [PSI:XL]

property_value

deadEndFormula: "C6 H8 O7 S1" xsd:string

property_value

monoIsotopicMass: "223.9990767" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02079 DPDPB ! BSOCOES

2.266. XLMOD:01076 ammonium amidated BSOCOES

Table 268. Term [XLMOD:01076]

id

XLMOD:01076

name

ammonium amidated BSOCOES

def

"Ammonium amidated bis(2-[Succinimidooxycarbonyloxy]ethyl) sulfone." [PSI:XL]

property_value

deadEndFormula: "C6 H9 N1 O6 S1" xsd:string

property_value

monoIsotopicMass: "223.015061105" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02079 DPDPB ! BSOCOES

2.267. XLMOD:01077 hydrolyzed DST

Table 269. Term [XLMOD:01077]

id

XLMOD:01077

name

hydrolyzed DST

def

"Hydrolyzed disuccinimidyl tartrate." [PSI:XL]

property_value

deadEndFormula: "C4 H4 O5" xsd:string

property_value

monoIsotopicMass: "132.0058747" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02032 DST ! DST

2.268. XLMOD:01078 ammonium amidated DST

Table 270. Term [XLMOD:01078]

id

XLMOD:01078

name

ammonium amidated DST

def

"Ammonium amidated disuccinimidyl tartrate." [PSI:XL]

property_value

deadEndFormula: "C4 H5 N1 O4" xsd:string

property_value

monoIsotopicMass: "131.021859105" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02032 DST ! DST

2.269. XLMOD:01079 hydrolyzed SDA

Table 271. Term [XLMOD:01079]

id

XLMOD:01079

name

hydrolyzed SDA

def

"Hydrolyzed succinimidyl-ester diazirine." [PSI:XL]

property_value

deadEndFormula: "C5 H8 O2" xsd:string

property_value

monoIsotopicMass: "100.05242954" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02138 DMA ! SDA

2.270. XLMOD:01080 oxidized SDA

Table 272. Term [XLMOD:01080]

id

XLMOD:01080

name

oxidized SDA

def

"Oxidized succinimidyl-ester diazirine." [PSI:XL]

property_value

deadEndFormula: "C5 H6 O2" xsd:string

property_value

monoIsotopicMass: "98.03677947" xsd:double

is_a

XLMOD:00097 oxidation cross-linker related chemical modification ! oxidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00064 oxidized ! oxidized

relationship

is_side_product_of XLMOD:02138 DMA ! SDA

2.271. XLMOD:01081 alkenized SDA

Table 273. Term [XLMOD:01081]

id

XLMOD:01081

name

alkenized SDA

def

"Alkenized succinimidyl-ester diazirine." [PSI:XL]

property_value

deadEndFormula: "C4 H4 O1" xsd:string

property_value

monoIsotopicMass: "68.02621477" xsd:double

is_a

XLMOD:00094 alkenized cross-linker related chemical modification ! alkenization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00065 alkenized ! alkenized

relationship

is_side_product_of XLMOD:02138 DMA ! SDA

2.272. XLMOD:01082 hydrolyzed LC-SDA

Table 274. Term [XLMOD:01082]

id

XLMOD:01082

name

hydrolyzed LC-SDA

def

"Hydrolyzed LC-SDA." [PSI:XL]

property_value

deadEndFormula: "C11 H19 N1 O3" xsd:string

property_value

monoIsotopicMass: "213.136493555" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02139 DMP ! LC-SDA

2.273. XLMOD:01083 oxidized LC-SDA

Table 275. Term [XLMOD:01083]

id

XLMOD:01083

name

oxidized LC-SDA

def

"Oxidized LC-SDA." [PSI:XL]

property_value

deadEndFormula: "C11 H17 N1 O3" xsd:string

property_value

monoIsotopicMass: "211.120843485" xsd:double

is_a

XLMOD:00097 oxidation cross-linker related chemical modification ! oxidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00064 oxidized ! oxidized

relationship

is_side_product_of XLMOD:02139 DMP ! LC-SDA

2.274. XLMOD:01084 alkenized LC-SDA

Table 276. Term [XLMOD:01084]

id

XLMOD:01084

name

alkenized LC-SDA

def

"Alkenized LC-SDA." [PSI:XL]

property_value

deadEndFormula: "C10 H15 N1 O2" xsd:string

property_value

monoIsotopicMass: "181.110278785" xsd:double

is_a

XLMOD:00094 alkenized cross-linker related chemical modification ! alkenization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00065 alkenized ! alkenized

relationship

is_side_product_of XLMOD:02139 DMP ! LC-SDA

2.275. XLMOD:01085 hydrolyzed L-Photo-Leucine

Table 277. Term [XLMOD:01085]

id

XLMOD:01085

name

hydrolyzed L-Photo-Leucine

def

"Hydrolyzed L-2-amino-4,4-azi-pentanoic acid." [PSI:XL]

property_value

deadEndFormula: "-C1 -H2 O1" xsd:string

property_value

monoIsotopicMass: "1.97926456" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:01900 L-Photo-Leucine ! L-Photo-Leucine

2.276. XLMOD:01086 oxidized L-Photo-Leucine

Table 278. Term [XLMOD:01086]

id

XLMOD:01086

name

oxidized L-Photo-Leucine

def

"Oxidized L-2-amino-4,4-azi-pentanoic acid." [PSI:XL]

property_value

deadEndFormula: "-C1 -H4 O1" xsd:string

property_value

monoIsotopicMass: "-0.036385501" xsd:double

is_a

XLMOD:00097 oxidation cross-linker related chemical modification ! oxidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00064 oxidized ! oxidized

relationship

is_side_product_of XLMOD:01900 L-Photo-Leucine ! L-Photo-Leucine

2.277. XLMOD:01087 alkenized L-Photo-Leucine

Table 279. Term [XLMOD:01087]

id

XLMOD:01087

name

alkenized L-Photo-Leucine

def

"Alkenized L-2-amino-4,4-azi-pentanoic acid." [PSI:XL]

property_value

deadEndFormula: "-C2 -H6" xsd:string

property_value

monoIsotopicMass: "-30.04695021" xsd:double

is_a

XLMOD:00094 alkenized cross-linker related chemical modification ! alkenization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00065 alkenized ! alkenized

relationship

is_side_product_of XLMOD:01900 L-Photo-Leucine ! L-Photo-Leucine

2.278. XLMOD:01088 hydrolyzed L-Photo-Methionine

Table 280. Term [XLMOD:01088]

id

XLMOD:01088

name

hydrolyzed L-Photo-Methionine

def

"Hydrolyzed L-2-amino-5,5-azi-hexanoic acid." [PSI:XL]

property_value

deadEndFormula: "C1 H2 O1 -S1" xsd:string

property_value

monoIsotopicMass: "-1.96150744" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:01901 L-Photo-Methionine ! L-Photo-Methionine

2.279. XLMOD:01089 oxidized L-Photo-Methionine

Table 281. Term [XLMOD:01089]

id

XLMOD:01089

name

oxidized L-Photo-Methionine

def

"Oxidized L-2-amino-5,5-azi-hexanoic acid." [PSI:XL]

property_value

deadEndFormula: "C1 O1 -S1" xsd:string

property_value

monoIsotopicMass: "-3.97715607" xsd:double

is_a

XLMOD:00097 oxidation cross-linker related chemical modification ! oxidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00064 oxidized ! oxidized

relationship

is_side_product_of XLMOD:01901 L-Photo-Methionine ! L-Photo-Methionine

2.280. XLMOD:01090 alkenized L-Photo-Methionine

Table 282. Term [XLMOD:01090]

id

XLMOD:01090

name

alkenized L-Photo-Methionine

def

"Alkenized L-2-amino-5,5-azi-hexanoic acid." [PSI:XL]

property_value

deadEndFormula: "-H2 -S1" xsd:string

property_value

monoIsotopicMass: "-33.98772221" xsd:double

is_a

XLMOD:00094 alkenized cross-linker related chemical modification ! alkenization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00065 alkenized ! alkenized

relationship

is_side_product_of XLMOD:01901 L-Photo-Methionine ! L-Photo-Methionine

2.281. XLMOD:01091 hydrolyzed BMOE

Table 283. Term [XLMOD:01091]

id

XLMOD:01091

name

hydrolyzed BMOE

def

"Hydrolyzed bis-Maleimidoethane." [PSI:XL]

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02188 THPP ! BMOE

2.282. XLMOD:01092 hydrolyzed BMPS

Table 284. Term [XLMOD:01092]

id

XLMOD:01092

name

hydrolyzed BMPS

def

"Hydrolyzed N-(beta-Maleimidopropyloxy)succinimide ester." [PSI:XL]

property_value

bridgeFormula: "C7 H7 O4 N1" xsd:string

property_value

monoIsotopicMass: "169.037507765" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02013 BMPS ! BMPS

2.283. XLMOD:01093 ammonium amidated BMPS

Table 285. Term [XLMOD:01093]

id

XLMOD:01093

name

ammonium amidated BMPS

def

"Ammonium amidated N-(beta-Maleimidopropyloxy)succinimide ester." [PSI:XL]

property_value

bridgeFormula: "C7 H8 O3 N2" xsd:string

property_value

monoIsotopicMass: "168.05349217" xsd:double

is_a

XLMOD:00095 ammonium amidation cross-linker related chemical modification ! ammonium amidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00021 ammonium amidated ! ammonium amidated

relationship

is_side_product_of XLMOD:02013 BMPS ! BMPS

2.284. XLMOD:01094 hydrolyzed PDH

Table 286. Term [XLMOD:01094]

id

XLMOD:01094

name

hydrolyzed PDH

def

"Hydrolyzed pimelic acid dihydrazide." [PSI:XL]

property_value

bridgeFormula: "C7 H12 N4" xsd:string

property_value

monoIsotopicMass: "170.11676112" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02223 alkyne-A-DSBSO ! PDH

2.285. XLMOD:01095 hydrolyzed PDH-d10

Table 287. Term [XLMOD:01095]

id

XLMOD:01095

name

hydrolyzed PDH-d10

def

"Deuterium labelled hydrolyzed pimelic acid dihydrazide." [PSI:XL]

property_value

bridgeFormula: "C7 D10 H2 N4" xsd:string

property_value

doubletDeltaMass: "10.06276744" xsd:double

property_value

monoIsotopicMass: "180.17952856" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02224 IML 3 ! PDH-d10

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.286. XLMOD:01096 hydrolyzed SuDP

Table 288. Term [XLMOD:01096]

id

XLMOD:01096

name

hydrolyzed SuDP

def

"Hydrolyzed disuccinimidyl-succinamyl-aspartyl-proline." [PMID:26091612]

property_value

monoIsotopicMass: "294.0852" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02112 SuDP ! SuDP

2.287. XLMOD:01097 hydrolyzed L-Photo-Isoleucine

Table 289. Term [XLMOD:01097]

id

XLMOD:01097

name

hydrolyzed L-Photo-Isoleucine

def

"Hydrolyzed L-Photo-Isoleucine." [PSI:XL]

property_value

deadEndFormula: "-C1 -H2 O1" xsd:string

property_value

monoIsotopicMass: "1.97926456" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:01902 L-Photo-Isoleucine ! L-Photo-Isoleucine

2.288. XLMOD:01098 oxidized L-Photo-Isoleucine

Table 290. Term [XLMOD:01098]

id

XLMOD:01098

name

oxidized L-Photo-Isoleucine

def

"Oxidized L-Photo-Isoleucine." [PSI:XL]

property_value

deadEndFormula: "-C1 -H4 O1" xsd:string

property_value

monoIsotopicMass: "-0.036385501" xsd:double

is_a

XLMOD:00097 oxidation cross-linker related chemical modification ! oxidation cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00064 oxidized ! oxidized

relationship

is_side_product_of XLMOD:01902 L-Photo-Isoleucine ! L-Photo-Isoleucine

2.289. XLMOD:01099 alkenized L-Photo-Isoleucine

Table 291. Term [XLMOD:01099]

id

XLMOD:01099

name

alkenized L-Photo-Isoleucine

def

"Alkenized L-Photo-Isoleucine." [PSI:XL]

property_value

deadEndFormula: "-C2 -H6" xsd:string

property_value

monoIsotopicMass: "-30.04695021" xsd:double

is_a

XLMOD:00094 alkenized cross-linker related chemical modification ! alkenization cross-linker related chemical modification

relationship

is_partially_reacted XLMOD:00065 alkenized ! alkenized

relationship

is_side_product_of XLMOD:01902 L-Photo-Isoleucine ! L-Photo-Isoleucine

2.290. XLMOD:01100 hydrolyzed Sulfo-SBED

Table 292. Term [XLMOD:01100]

id

XLMOD:01100

name

hydrolyzed Sulfo-SBED

def

"Hydrolyzed Sulfo-SBED cross-linker." [PMID:16246579]

property_value

monoIsotopicMass: "652.217" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:03002 Sulfo-SBED ! Sulfo-SBED

2.291. XLMOD:01101 hydrolyzed PIR

Table 293. Term [XLMOD:01101]

id

XLMOD:01101

name

hydrolyzed PIR

def

"Hydrolized Protein Interaction Reporter." [PMID:15623310]

property_value

CID_Fragment: "828.5" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02237 PIR ! PIR

2.292. XLMOD:01102 hydrolized PL

Table 294. Term [XLMOD:01102]

id

XLMOD:01102

name

hydrolized PL

def

"Hydrolyzed photo-cleavable Leiker." [PMID:26952210, PMID:27734140]

property_value

monoIsotopicMass: "334.15" xsd:double

is_a

XLMOD:00096 hydrolization cross-linker related chemical modification ! hydrolization cross-linker related chemical modification

relationship

is_cleavable XLMOD:00147 photocleavable ! photocleavable

relationship

is_partially_reacted XLMOD:00011 hydrolyzed ! hydrolyzed

relationship

is_side_product_of XLMOD:02227 PL ! PL

2.293. XLMOD:01700 8-methoxypsoralen

Table 295. Term [XLMOD:01700]

id

XLMOD:01700

name

8-methoxypsoralen

def

"8-methoxypsoralen reagent." [CAS:298-81-7, PubChem_Compound:4114, ChemSpiderID:3971, ChemicalBookNo:CB6733540, PMID:9013628]

synonym

"8-MOP" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.294. XLMOD:01701 4'-hydroxymethyl-4,5'8-trimethylpsoralen

Table 296. Term [XLMOD:01701]

id

XLMOD:01701

name

4'-hydroxymethyl-4,5'8-trimethylpsoralen

def

"4'-hydroxymethyl-4,5'8-trimethylpsoralen reagent." [CAS:62442-59-5, PubChem_Compound:104953, ChemSpiderID:94710, MDL:MFCD00036888, ChemicalBookNo:CB7358269, PMID:9013628]

synonym

"HMT" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00100 reactive group ! reactive group

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.295. XLMOD:01702 5-iodouracil

Table 297. Term [XLMOD:01702]

id

XLMOD:01702

name

5-iodouracil

def

"5-iodouracil reagent." [CAS:696-07-1, PubChem_Compound:69672, MDL:MFCD00006020, ChemSpiderID:62873, ChemicalBookNo:CB8771577, PMID:12476441, PMID:9013628]

synonym

"5-IU" EXACT []

synonym

"5IU" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00081 nucleobase derivative ! nucleobase derivative

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00080 uracil ! uracil

2.296. XLMOD:01703 4-thiouracil

Table 298. Term [XLMOD:01703]

id

XLMOD:01703

name

4-thiouracil

def

"4-thiouracil reagent." [CAS:591-28-6, PubChem_Compound:2734394, MDL:MFCD00090842, ChemSpiderID:2016146, ChemicalBookNo:CB4469328, PMID:12476441, PMID:22575267]

synonym

"4-SU" EXACT []

synonym

"4SU" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00081 nucleobase derivative ! nucleobase derivative

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00080 uracil ! uracil

2.297. XLMOD:01704 6-thioguanosine

Table 299. Term [XLMOD:01704]

id

XLMOD:01704

name

6-thioguanosine

def

"6-thioguanosine reagent." [CAS:85-31-4, PubChem_Compound:2724387, ChemSpiderID:2006534, ChemicalBookNo:CB3722231, PMID:20946768, PMID:22575267]

synonym

"6-SG" EXACT []

synonym

"6SG" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00088 nucleoside derivative ! nucleoside derivative

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00084 guanosine ! guanosine

2.298. XLMOD:01705 5-bromouracil

Table 300. Term [XLMOD:01705]

id

XLMOD:01705

name

5-bromouracil

def

"5-bromouracil reagent." [CAS:51-20-7, PubChem_Compound:5802, ChemSpiderID:5597, Beilstein:127176, MDL:MFCD00006017, ChemicalBookNo:CB6388195, PMID:9145285, PMID:22575267]

synonym

"5-BU" EXACT []

synonym

"5BU" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00081 nucleobase derivative ! nucleobase derivative

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00080 uracil ! uracil

2.299. XLMOD:01706 5-iodocytosine

Table 301. Term [XLMOD:01706]

id

XLMOD:01706

name

5-iodocytosine

def

"5-iodocytosine reagent." [CAS:1122-44-7, PubChem_Compound:14281, MDL:MFCD00023162, ChemSpiderID:13643, ChemicalBookNo:CB9203633, PMID:9145285]

synonym

"5-IC" EXACT []

synonym

"5IC" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00088 nucleoside derivative ! nucleoside derivative

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00078 cytosine ! cytosine

2.300. XLMOD:01707 8-azidoadenosine

Table 302. Term [XLMOD:01707]

id

XLMOD:01707

name

8-azidoadenosine

def

"8-azidoadenosine reagent." [CAS:4372-67-2, ChemSpiderID:141244, ChemicalBookNo:CB7166563, PMID:9145285]

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00088 nucleoside derivative ! nucleoside derivative

relationship

has_reactive_group XLMOD:00055 azide ! azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00083 adenosine ! adenosine

2.301. XLMOD:01708 2-azidoadenosine

Table 303. Term [XLMOD:01708]

id

XLMOD:01708

name

2-azidoadenosine

def

"2-azidoadenosine reagent." [CAS:59587-07-4, PubChem_Compound:510978, ChemicalBookNo:CB01175626, PMID:9145285]

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00088 nucleoside derivative ! nucleoside derivative

relationship

has_reactive_group XLMOD:00055 azide ! azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00083 adenosine ! adenosine

2.302. XLMOD:01709 8-azidoguanosine

Table 304. Term [XLMOD:01709]

id

XLMOD:01709

name

8-azidoguanosine

def

"8-azidoguanosine reagent." [PubChem_Compound:23375450, ChemSpiderID:8034117, PMID:9145285]

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00088 nucleoside derivative ! nucleoside derivative

relationship

has_reactive_group XLMOD:00055 azide ! azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00084 guanosine ! guanosine

2.303. XLMOD:01710 5-azidouridine

Table 305. Term [XLMOD:01710]

id

XLMOD:01710

name

5-azidouridine

def

"5-azidouridine reagent." [CAS:1261272-24-5, PubChem_Compound:20832934, ChemSpiderID:18697526, ChemicalBookNo:CB62543444, PMID:9145285]

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00088 nucleoside derivative ! nucleoside derivative

relationship

has_reactive_group XLMOD:00055 azide ! azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00086 uridine ! uridine

2.304. XLMOD:01711 bis-[3-(2-ketobutyraldehyde)ether

Table 306. Term [XLMOD:01711]

id

XLMOD:01711

name

bis-[3-(2-ketobutyraldehyde)ether

def

"bis-[3-(2-ketobutyraldehyde)ether reagent." [CAS:84031-85-6, PubChem_Compound:134685, ChemSpiderID:118706, ChemicalBookNo:CB81338982, PMID:16875836]

synonym

"Bikethoxal" EXACT []

synonym

"BKT" EXACT []

property_value

monoIsotopicMass: "230.079" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "5.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00115 glyoxal ! glyoxal

2.305. XLMOD:01712 mechlorethamine

Table 307. Term [XLMOD:01712]

id

XLMOD:01712

name

mechlorethamine

def

"Mechlorethamine reagent." [CAS:55-86-7, PubChem_Compound:4033, MDL:MFCD00012517, ChemSpiderID:3893, ChemicalBookNo:CB5270716, PMID:16875836]

synonym

"Nitrogen mustard" EXACT []

synonym

"NM" EXACT []

property_value

monoIsotopicMass: "83.073" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.5" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00153 chloroethyl ! chloroethyl

2.306. XLMOD:01713 4-[bis-(2-chloroethyl)amino]benzenebutanoic acid

Table 308. Term [XLMOD:01713]

id

XLMOD:01713

name

4-[bis-(2-chloroethyl)amino]benzenebutanoic acid

def

"4-[bis-(2-chloroethyl)amino]benzenebutanoic acid reagent." [CAS:305-03-3, PubChem_Compound:2708, Beilstein:999011, MDL:MFCD00021783, ChemSpiderID:2607, ChemicalBookNo:CB5270716, PMID:16875836]

synonym

"Chlorambucil" EXACT []

synonym

"CHB" EXACT []

property_value

monoIsotopicMass: "231.126" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.5" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00153 chloroethyl ! chloroethyl

2.307. XLMOD:01714 sym-triazine trichloride

Table 309. Term [XLMOD:01714]

id

XLMOD:01714

name

sym-triazine trichloride

def

"Sym-triazine trichloride reagent." [CAS:108-80-5, PubChem_Compound:24851182, Beilstein:126982, MDL:MFCD00082990, ChemSpiderID:7668, ChemicalBookNo:CB5852763, PMID:16875836]

synonym

"Cyanuric acid" EXACT []

synonym

"STT" EXACT []

property_value

monoIsotopicMass: "110.962" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "2.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

2.308. XLMOD:01715 Heteroconjugate 20

Table 310. Term [XLMOD:01715]

id

XLMOD:01715

name

Heteroconjugate 20

def

"Heteroconjugate 20 reagent." [PMID:26335278]

synonym

"HC20" EXACT []

property_value

monoIsotopicMass: "1554.6871" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! bifunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

2.309. XLMOD:01716 benzophenone-4-iodoacetamide

Table 311. Term [XLMOD:01716]

id

XLMOD:01716

name

benzophenone-4-iodoacetamide

def

"Benzophenone-4-iodoacetamide reagent." [CAS:76809-63-7, PubChem_Compound:131289, ChemicalBookNo:CB3488704, PMID:10208813]

synonym

"BPI" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.310. XLMOD:01717 azidophenacyl bromide

Table 312. Term [XLMOD:01717]

id

XLMOD:01717

name

azidophenacyl bromide

def

"Azidophenacyl bromide reagent." [CAS:57018-46-9, PubChem_Compound:92627, Beilstein:1961705, MDL:MFCD00042637, ChemSpiderID:83619, ChemicalBookNo:CB3120420, PMID:10208813]

synonym

"APB" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_fluorophore XLMOD:06110 phenacyl ! phenacyl

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.311. XLMOD:01718 benzophenone-phosphatidylcholine

Table 313. Term [XLMOD:01718]

id

XLMOD:01718

name

benzophenone-phosphatidylcholine

def

"Benzophenone-phosphatidylcholine." [PMID:19171301]

synonym

"benzophenone-PC" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00092 lipid analogue ! lipid analogue

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.312. XLMOD:01719 phenylazide-phosphatidylcholine

Table 314. Term [XLMOD:01719]

id

XLMOD:01719

name

phenylazide-phosphatidylcholine

def

"Phenylazide-phosphatidylcholine." [PMID:19171301]

synonym

"phenylazide-PC" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00092 lipid analogue ! lipid analogue

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.313. XLMOD:01720 N-(4-azidosalicylamidyl)-1,2-dilauroyl-sn-glycero-3-phosphoethanolamine

Table 315. Term [XLMOD:01720]

id

XLMOD:01720

name

N-(4-azidosalicylamidyl)-1,2-dilauroyl-sn-glycero-3-phosphoethanolamine

def

"The N-(4-azidosalicylamidyl)-1,2-dilauroyl-sn-glycero-3-phosphoethanolamine lipid analogue used for lipid-protein cross-linking." [PMID:19171301]

synonym

"ASA" EXACT []

is_a

XLMOD:00092 lipid analogue ! lipid analogue

2.314. XLMOD:01721 Ac5-5-SiaDAz

Table 316. Term [XLMOD:01721]

id

XLMOD:01721

name

Ac5-5-SiaDAz

def

"The Ac5-5-SiaDAz sialic acid analogue used for glycan-protein cross-linking." [PMID:18293988, PMID:19536272]

is_a

XLMOD:00093 sialic acid analogue ! sialic acid analogue

2.315. XLMOD:01722 Ac4-ManNDAz

Table 317. Term [XLMOD:01722]

id

XLMOD:01722

name

Ac4-ManNDAz

def

"The Ac4-ManNDAz sialic acid analogue used for glycan-protein cross-linking." [PMID:18293988, PMID:19536272, PMID:20816498]

is_a

XLMOD:00093 sialic acid analogue ! sialic acid analogue

2.316. XLMOD:01723 Ac4-ManNAc

Table 318. Term [XLMOD:01723]

id

XLMOD:01723

name

Ac4-ManNAc

def

"The Ac4-ManNAc sialic acid analogue used for glycan-protein cross-linking." [PMID:19536272]

is_a

XLMOD:00093 sialic acid analogue ! sialic acid analogue

2.317. XLMOD:01724 Ac4-GlcNDAz

Table 319. Term [XLMOD:01724]

id

XLMOD:01724

name

Ac4-GlcNDAz

def

"The Ac4-GlcNDAz sialic acid analogue used for glycan-protein cross-linking." [PMID:19536272, PMID:20816498]

is_a

XLMOD:00093 sialic acid analogue ! sialic acid analogue

2.318. XLMOD:01725 Ac5-methyl-SiaDAz

Table 320. Term [XLMOD:01725]

id

XLMOD:01725

name

Ac5-methyl-SiaDAz

def

"The Ac5-methyl-SiaDAz sialic acid analogue used for glycan-protein cross-linking." [PMID:20816498]

is_a

XLMOD:00093 sialic acid analogue ! sialic acid analogue

2.319. XLMOD:01726 sialylated LacNAc-biotin

Table 321. Term [XLMOD:01726]

id

XLMOD:01726

name

sialylated LacNAc-biotin

def

"Sialylated LacNAc-biotin used for glycan-protein cross-linking." [PMID:26541974]

is_a

XLMOD:00093 sialic acid analogue ! sialic acid analogue

2.320. XLMOD:01800 Psoralen-PEG3-Biotin

Table 322. Term [XLMOD:01800]

id

XLMOD:01800

name

Psoralen-PEG3-Biotin

def

"Psoralen-PEG3-Biotin biotinylation reagent." [PSI:XL]

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "36.86" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00134 psoralen ! psoralen

2.321. XLMOD:01801 Photoactivatable Biotin

Table 323. Term [XLMOD:01801]

id

XLMOD:01801

name

Photoactivatable Biotin

def

"Photoactivatable Biotin biotinylation reagent." [PSI:XL]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "30.0" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00107 nitrophenyl azide ! nitrophenyl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.322. XLMOD:01802 TFPA-PEG3-Biotin

Table 324. Term [XLMOD:01802]

id

XLMOD:01802

name

TFPA-PEG3-Biotin

def

"TFPA-PEG3-Biotin biotinylation reagent." [CAS:1264662-85-2, ChemSpiderID:59757057]

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "33.4" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00118 tetrafluorophenyl azide ! tetrafluorophenyl azide

2.323. XLMOD:01803 Biotin-LC-ASA

Table 325. Term [XLMOD:01803]

id

XLMOD:01803

name

Biotin-LC-ASA

def

"1-(4-azidosalicylamido)-6(biotinamido)-hexane." [ChemicalBookNo:CB9438943]

synonym

"Biotin-Long Chain-ASA" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "29.9" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

2.324. XLMOD:01804 Sulfo-NHS-Biotin

Table 326. Term [XLMOD:01804]

id

XLMOD:01804

name

Sulfo-NHS-Biotin

def

"Biotin 3-sulfo-N-hydroxysuccinimide ester sodium salt." [CAS:119616-38-5, PubChem_Compound:56846292, ChemSpiderID:28568147, ChemicalBookNo:CB8277468]

synonym

"Sulfosuccinimidyl biotin" EXACT []

synonym

"N-Hydroxysulfosuccinimidobiotin" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "13.5" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

2.325. XLMOD:01805 Sulfo-NHS-LC-Biotin

Table 327. Term [XLMOD:01805]

id

XLMOD:01805

name

Sulfo-NHS-LC-Biotin

def

"Sulfo-NHS-LC-Biotin biotinylation reagent." [CAS:127062-22-0, PubChem_Compound:71571497, ChemSpiderID:29788101, ChemicalBookNo:CB7387089]

synonym

"Long chain Sulfo-NHS-Biotin" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "22.4" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

2.326. XLMOD:01806 NHS-PEG12-Biotin

Table 328. Term [XLMOD:01806]

id

XLMOD:01806

name

NHS-PEG12-Biotin

def

"NHS-PEG12-Biotin biotinylation reagent." [CAS:365441-71-0, PubChem_Compound:58481068, ChemSpiderID:29354431, ChemicalBookNo:CB52546796]

synonym

"Biotin-PEG12-NHS ester" EXACT []

property_value

hydrophilicPEGchain: "12" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "56" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.327. XLMOD:01807 NHS-SS-PEG4-Biotin

Table 329. Term [XLMOD:01807]

id

XLMOD:01807

name

NHS-SS-PEG4-Biotin

def

"NHS-SS-PEG4-Biotin biotinylation reagent." [PSI:XL]

property_value

hydrophilicPEGchain: "4" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "37.9" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.328. XLMOD:01808 NHS-Biotin

Table 330. Term [XLMOD:01808]

id

XLMOD:01808

name

NHS-Biotin

def

"Biotin N-hydroxysuccinimide ester." [CAS:35013-72-0, PubChem_Compound:434213, ChemSpiderID:5142865, ChemicalBookNo:CB7371998]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "13.5" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.329. XLMOD:01809 NHS-LC-Biotin

Table 331. Term [XLMOD:01809]

id

XLMOD:01809

name

NHS-LC-Biotin

def

"Biotinamidohexanoyl-6-aminohexanoic acid N-hydroxysuccinimide ester." [CAS:89889-52-1, PubChem_Compound:4072290, ChemSpiderID:17346377, ChemicalBookNo:CB1412590]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "30.5" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.330. XLMOD:01810 NHS-SS-Biotin

Table 332. Term [XLMOD:01810]

id

XLMOD:01810

name

NHS-SS-Biotin

def

"Biotin disulfide N-hydroxysuccinimide ester." [CAS:142439-92-7, PubChem_Compound:71312116, ChemSpiderID:3405732, ChemicalBookNo:CB4216304]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "24.3" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.331. XLMOD:01811 NHS-Iminobiotin trifluoroacetamide

Table 333. Term [XLMOD:01811]

id

XLMOD:01811

name

NHS-Iminobiotin trifluoroacetamide

def

"NHS-Iminobiotin trifluoroacetamide biotinylation reagent." [ChemicalBookNo:CB6315012]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "13.5" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00071 iminobiotintrifluoroacetamide ! iminobiotintrifluoroacetamide

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.332. XLMOD:01812 PFP-Biotin

Table 334. Term [XLMOD:01812]

id

XLMOD:01812

name

PFP-Biotin

def

"Pentafluorophenyl-Biotin." [CAS:120550-35-8, PubChem_Compound:11122445, ChemSpiderID:9297574, ChemicalBookNo:CB6307189]

synonym

"Biotin-PFP-ester" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "9.6" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00120 pentafluorophenyl ! pentafluorophenyl

2.333. XLMOD:01813 TFP-PEG3-Biotin

Table 335. Term [XLMOD:01813]

id

XLMOD:01813

name

TFP-PEG3-Biotin

def

"Tetrafluorophenyl-PEG3-Biotin." [PSI:XL]

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "32.6" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00150 tetrafluorophenyl ester ! tetrafluorophenyl ester

2.334. XLMOD:01814 Maleimide-PEG11-Biotin

Table 336. Term [XLMOD:01814]

id

XLMOD:01814

name

Maleimide-PEG11-Biotin

def

"Maleimide-PEG11-Biotin biotinylation reagent." [PSI:XL]

property_value

hydrophilicPEGchain: "11" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "59.1" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.335. XLMOD:01815 Biotin-BMCC

Table 337. Term [XLMOD:01815]

id

XLMOD:01815

name

Biotin-BMCC

def

"1-Biotinamido-4-[4´-(maleimidomethyl)cyclohexanecarboxamido]butane." [ChemicalBookNo:CB5366406]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "32.6" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.336. XLMOD:01816 Iodoacetyl-PEG2-Biotin

Table 338. Term [XLMOD:01816]

id

XLMOD:01816

name

Iodoacetyl-PEG2-Biotin

def

"Iodoacetyl-PEG2-Biotin biotinylation reagent." [PSI:XL]

property_value

hydrophilicPEGchain: "2" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "24.7" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00127 iodoacetyl ! iodoacetyl

2.337. XLMOD:01817 Iodoacetyl-LC-Biotin

Table 339. Term [XLMOD:01817]

id

XLMOD:01817

name

Iodoacetyl-LC-Biotin

def

"Iodoacetyl-LC-Biotin biotinylation reagent." [CAS:93285-75-7, PubChem_Compound:125043, ChemSpiderID:4248811, ChemicalBookNo:CB5664328]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "27.1" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00127 iodoacetyl ! iodoacetyl

2.338. XLMOD:01818 Pentylamine-Biotin

Table 340. Term [XLMOD:01818]

id

XLMOD:01818

name

Pentylamine-Biotin

def

"5-(Biotinamido)pentylamine." [CAS:115416-38-1, PubChem_Compound:83906, ChemSpiderID:75715, ChemicalBookNo:CB8415868]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "18.9" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00151 pentylamine ! pentylamine

2.339. XLMOD:01819 Amine-PEG2-Biotin

Table 341. Term [XLMOD:01819]

id

XLMOD:01819

name

Amine-PEG2-Biotin

def

"5-(Biotinamido)pentylamine." [PubChem_Compound:11199678]

synonym

"Biotin-PEG2-amine" EXACT []

property_value

hydrophilicPEGchain: "2" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "20.4" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

2.340. XLMOD:01820 Amine-PEG3-Biotin

Table 342. Term [XLMOD:01820]

id

XLMOD:01820

name

Amine-PEG3-Biotin

def

"Amine-PEG3-Biotin biotinylation reagent." [PubChem_Compound:53384310]

synonym

"Biotin-PEG3-amine" EXACT []

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "22.9" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

2.341. XLMOD:01821 Biocytine-Hydrazide

Table 343. Term [XLMOD:01821]

id

XLMOD:01821

name

Biocytine-Hydrazide

def

"Biocytine-Hydrazide biotinylation reagent." [CS:102743-85-1, PubChem_Compound:128197]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "19.7" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.342. XLMOD:01822 Biotin-Hydrazide

Table 344. Term [XLMOD:01822]

id

XLMOD:01822

name

Biotin-Hydrazide

def

"Biocytine-Hydrazide biotinylation reagent." [CAS:66640-86-6, PubChem_Compound:83872, ChemSpiderID:75684, ChemicalBookNo:CB3175354]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "15.7" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.343. XLMOD:01823 Biotin-LC-Hydrazide

Table 345. Term [XLMOD:01823]

id

XLMOD:01823

name

Biotin-LC-Hydrazide

def

"Long chain Biocytine-Hydrazide biotinylation reagent." [CAS:109276-34-8, PubChem_Compound:3504484, ChemSpiderID:75709, ChemicalBookNo:CB4309220]

synonym

"Biotin-LC-Hz" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "24.7" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.344. XLMOD:01824 Biotin-PEG4-Hydrazide

Table 346. Term [XLMOD:01824]

id

XLMOD:01824

name

Biotin-PEG4-Hydrazide

def

"Biotin-PEG4-Hydrazide biotinylation reagent." [PubChem_Compound:51340934]

property_value

hydrophilicPEGchain: "4" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "31.3" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.345. XLMOD:01825 Photobiotin

Table 347. Term [XLMOD:01825]

id

XLMOD:01825

name

Photobiotin

def

"Photoactivatable Biotin." [CAS:96087-37-5, PubChem_Compound:15949227, ChemSpiderID:2299671, ChemicalBookNo:CB7301795]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "30.0" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00107 nitrophenyl azide ! nitrophenyl azide

2.346. XLMOD:01826 Biotin-PEG2-Alkyne

Table 348. Term [XLMOD:01826]

id

XLMOD:01826

name

Biotin-PEG2-Alkyne

def

"Biotin-PEG2-Alkyne." [PubChem_Compound:91757772]

property_value

hydrophilicPEGchain: "2" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_handle XLMOD:00053 alkyne ! alkyne

relationship

is_cleavable XLMOD:00034 photo cleavable ! photo cleavable

2.347. XLMOD:01827 Biotin-PEG2-C4-Alkyne

Table 349. Term [XLMOD:01827]

id

XLMOD:01827

name

Biotin-PEG2-C4-Alkyne

def

"Biotin-PEG2-C4-Alkyne." [CAS:109276-34-8, PubChem_Compound:91757769, ChemSpiderID:75709, ChemicalBookNo:CB73062389]

property_value

hydrophilicPEGchain: "2" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_handle XLMOD:00053 alkyne ! alkyne

relationship

is_cleavable XLMOD:00034 photo cleavable ! photo cleavable

2.348. XLMOD:01828 Biotin-PEG4-Alkyne

Table 350. Term [XLMOD:01828]

id

XLMOD:01828

name

Biotin-PEG4-Alkyne

def

"Biotin-PEG4-Alkyne." [CAS:1458576-00-5, PubChem_Compound:75409985, ChemicalBookNo:CB82984377]

property_value

hydrophilicPEGchain: "4" xsd:nonNegativeInteger

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_handle XLMOD:00053 alkyne ! alkyne

relationship

is_cleavable XLMOD:00034 photo cleavable ! photo cleavable

2.349. XLMOD:01829 2-iminothiolane

Table 351. Term [XLMOD:01829]

id

XLMOD:01829

name

2-iminothiolane

def

"2-iminothiolane reagent." [CAS:4781-83-3, PubChem_Compound:433941, MDL:MFCD00039013, ChemSpiderID:10732937, ChemicalBookNo:CB7373482, PMID:6170935, PMID:11350598]

synonym

"Traut’s reagent" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00154 imino ! imino

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.350. XLMOD:01830 3-Azidopyridine-adenine dinucleotide

Table 352. Term [XLMOD:01830]

id

XLMOD:01830

name

3-Azidopyridine-adenine dinucleotide

def

"3-Azidopyridine-adenine dinucleotide reagent." [CAS:50695-15-3, PubChem_Compound:189126, MDL:MFCD00078882, ChemSpiderID:164324, ChemicalBookNo:CB91349828, PMID:20946768, PMID:6770736]

synonym

"APA" EXACT []

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00114 aryl azide ! aryl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.351. XLMOD:01900 L-Photo-Leucine

Table 353. Term [XLMOD:01900]

id

XLMOD:01900

name

L-Photo-Leucine

def

"L-2-amino-4,4-azi-pentanoic acid." [CAS:851960-91-3, ChemSpiderID:32980228, PMID:15782218, PMID:26700045]

synonym

"L-Photo-Leu" EXACT []

comment

A photoreactive amino acid analog of L-Leucine for incorporation during protein synthesis that can be used for in vivo labelling, cross-linking and protein-protein interaction studies in live cells.

property_value

bridgeFormula: "-C1 -H4" xsd:string

property_value

monoIsotopicMass: "-16.0313" xsd:double

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00049 amino acid derivative ! amino acid derivative

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00059 L-Leucine ! L-Leucine

2.352. XLMOD:01901 L-Photo-Methionine

Table 354. Term [XLMOD:01901]

id

XLMOD:01901

name

L-Photo-Methionine

def

"L-2-amino-5,5-azi-hexanoic acid." [CAS:851960-68-4, ChemSpiderID:61327213, PMID:15782218, PMID:26700045]

synonym

"L-Photo-Met" EXACT []

comment

A photoreactive amino acid analog of L-Methionine for incorporation during protein synthesis that can be used for in vivo labelling, cross-linking and protein-protein interaction studies in live cells.

property_value

bridgeFormula: "C1 -S1" xsd:string

property_value

monoIsotopicMass: "-19.972072" xsd:double

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00049 amino acid derivative ! amino acid derivative

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00060 L-Methionine ! L-Methionine

2.353. XLMOD:01902 L-Photo-Isoleucine

Table 355. Term [XLMOD:01902]

id

XLMOD:01902

name

L-Photo-Isoleucine

def

"L-Photo-Isoleucine." [PMID:16477643]

synonym

"L-Photo-Ile" EXACT []

comment

A photoreactive amino acid analog of L-Isoleucine for incorporation during protein synthesis that can be used for in vivo labelling, cross-linking and protein-protein interaction studies in live cells.

property_value

bridgeFormula: "-C1 -H4" xsd:string

property_value

monoIsotopicMass: "-16.0313" xsd:double

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00049 amino acid derivative ! amino acid derivative

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00068 L-Isoleucine ! L-Isoleucine

2.354. XLMOD:01903 pBpa

Table 356. Term [XLMOD:01903]

id

XLMOD:01903

name

pBpa

def

"p-benzoyl-L-phenylalanine." [PMID:16170867]

comment

A photoreactive amino acid analog of L-Phenylalanine for incorporation during protein synthesis that can be used for in vivo labelling, cross-linking and protein-protein interaction studies in live cells.

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00049 amino acid derivative ! amino acid derivative

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00070 L-Phenylalanine ! L-Phenylalanine

2.355. XLMOD:01904 pBpa-d11

Table 357. Term [XLMOD:01904]

id

XLMOD:01904

name

pBpa-d11

def

"Deuterium labelled p-benzoyl-L-phenylalanine." [PMID:18704231]

comment

A photoreactive deuterium-labelled amino acid analog of L-Phenylalanine for incorporation during protein synthesis that can be used for in vivo labelling, cross-linking and protein-protein interaction studies in live cells.

property_value

reactionSites: "1" xsd:nonNegativeInteger

is_a

XLMOD:00049 amino acid derivative ! amino acid derivative

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

relationship

is_analog_of XLMOD:00070 L-Phenylalanine ! L-Phenylalanine

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.356. XLMOD:02000 BS3

Table 358. Term [XLMOD:02000]

id

XLMOD:02000

name

BS3

def

"Bis(sulfosuccinimidyl)suberate." [CAS:82436-77-9, PubChem_Compound:6097991, PMID:12892908, ChemSpiderID:110394, ChemicalBookNo:CB0136444]

synonym

"Suberic acid bis(3-sulfo-N-hydroxysuccinimide ester)" EXACT []

synonym

"Bis(sulfosuccinimidyl)suberate" EXACT []

synonym

"Sulfo-DSS" EXACT []

synonym

"BSSS" EXACT []

synonym

"BS3-d0" EXACT []

synonym

"BS3-H12" EXACT []

property_value

bridgeFormula: "C8 H10 O2" xsd:string

property_value

monoIsotopicMass: "138.06807961" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

2.357. XLMOD:02001 DSS

Table 359. Term [XLMOD:02001]

id

XLMOD:02001

name

DSS

def

"Disuccinimidyl suberate." [CAS:68528-80-3, PubChem_Compound:100658, PMID:16944939, ChemSpiderID:90944, ChemicalBookNo:CB1219157]

synonym

"Bis(succinimidyl) suberate" EXACT []

synonym

"Suberic acid bis(N-hydroxysuccinimide ester)" EXACT []

synonym

"Disuccinimidyl octanedioate" EXACT []

synonym

"DSS-d0" EXACT []

synonym

"DSS-H12" EXACT []

synonym

"1,1'-[(1,8-Dioxooctane-1,8-diyl)bis(oxy)]dipyrrolidine-2,5-dione" EXACT []

property_value

bridgeFormula: "C8 H10 O2" xsd:string

property_value

monoIsotopicMass: "138.06807961" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.358. XLMOD:02002 DSS-d4

Table 360. Term [XLMOD:02002]

id

XLMOD:02002

name

DSS-d4

def

"Deuterium labelled disuccinimidyl 2,2,7,7-suberate." [PubChem_Compound:91757798, PMID:11354472]

property_value

bridgeFormula: "C8 D4 H6 O2" xsd:string

property_value

doubletDeltaMass: "4.02508" xsd:double

property_value

monoIsotopicMass: "142.093186586" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.359. XLMOD:02003 DSS-d12

Table 361. Term [XLMOD:02003]

id

XLMOD:02003

name

DSS-d12

def

"Deuterium labelled disuccinimidyl 2,2,3,3,4,4,5,5,6,6,7,7-suberate." [PSI:XL, PMID:11354472, PMID:16944939]

property_value

bridgeFormula: "C8 D10 O2" xsd:string

property_value

doubletDeltaMass: "12.07573" xsd:double

property_value

monoIsotopicMass: "150.143400538" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.360. XLMOD:02004 BS3-d4

Table 362. Term [XLMOD:02004]

id

XLMOD:02004

name

BS3-d4

def

"Deuterium labelled (bis(sulfosuccinimidyl) 2,2,7,7-suberate)." [PubChem_Compound:91757801]

property_value

doubletDeltaMass: "4.02508" xsd:double

property_value

monoIsotopicMass: "142.093186586" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.361. XLMOD:02005 BS2G

Table 363. Term [XLMOD:02005]

id

XLMOD:02005

name

BS2G

def

"Bis(sulfosuccinimidyl) glutarate." [PubChem_Compound:91757794, ChemicalBookNo:CB91307211]

synonym

"Glutaric acid bis(3-sulfo-N-hydroxysuccinimide ester)" EXACT []

synonym

"Sulfo-DSG" EXACT []

synonym

"Disulfosuccinimidylglutarate" EXACT []

synonym

"DSSG" EXACT []

synonym

"BS2G-d0" EXACT []

property_value

bridgeFormula: "C5 H4 O2" xsd:string

property_value

monoIsotopicMass: "96.0211294" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

2.362. XLMOD:02006 DSG

Table 364. Term [XLMOD:02006]

id

XLMOD:02006

name

DSG

def

"Disuccinimidyl glutarate." [CAS:79642-50-5, PubChem_Compound:4432628, Beilstein:8575145, MDL:MFCD00153597, ChemSpiderID:3632504, ChemicalBookNo:CB0373852]

synonym

"Di(N-succinimidyl) glutarate" EXACT []

synonym

"Di-succinimidyl glutarate" EXACT []

synonym

"Di N-succinimidyl glutarate" EXACT []

synonym

"Bis-NHS glutarate" EXACT []

synonym

"Disuccinimidyl glutaric dicarboxylate" EXACT []

synonym

"DSG-d0" EXACT []

property_value

bridgeFormula: "C5 H4 O2" xsd:string

property_value

monoIsotopicMass: "96.0211294" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.363. XLMOD:02007 DSG-d4

Table 365. Term [XLMOD:02007]

id

XLMOD:02007

name

DSG-d4

def

"Deuterium labelled disuccinimidyl 2,2,4,4-glutarate." [PubChem_Compound:91757797]

property_value

bridgeFormula: "C5 D4 O2" xsd:string

property_value

doubletDeltaMass: "4.02508" xsd:double

property_value

monoIsotopicMass: "100.046236376" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.364. XLMOD:02008 BS2G-d4

Table 366. Term [XLMOD:02008]

id

XLMOD:02008

name

BS2G-d4

def

"Deuterium labelled bis(sulfosuccinimidyl) 2,2,4,4-glutarate." [PubChem_Compound:91757799]

synonym

"DSSG-d4" EXACT []

property_value

bridgeFormula: "C5 D4 O2" xsd:string

property_value

doubletDeltaMass: "4.02508" xsd:double

property_value

monoIsotopicMass: "100.046236376" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.365. XLMOD:02009 Disulfide

Table 367. Term [XLMOD:02009]

id

XLMOD:02009

name

Disulfide

def

"Disulfide." [PSI:XL]

property_value

bridgeFormula: "-H2" xsd:string

property_value

monoIsotopicMass: "-2.01565007" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

specificities: "©&©" xsd:string

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

is_a

XLMOD:00008 zero-length cross-linker ! zero-length cross-linker

2.366. XLMOD:02010 1-ethyl-3-(3-Dimethylaminopropyl)carbodiimide hydrochloride

Table 368. Term [XLMOD:02010]

id

XLMOD:02010

name

1-ethyl-3-(3-Dimethylaminopropyl)carbodiimide hydrochloride

def

"1-ethyl-3-(3-Dimethylaminopropyl)carbodiimide hydrochloride." [CAS:25952-53-8, PubChem_Compound:2723939, Beilstein:5764110, ChemSpiderID:2006116, ChemicalBookNo:CB7403031, MDL:MFCD00012503, PMID:19136724, PMID:3394930]

comment

Used to conjugate carboxyl functional groups to primary amines from peptides and proteins and is ideal for covalently binding proteins or peptides to carboxyl containing beads, resins, or nanoparticles.

synonym

"3-(3-Dimethylaminopropyl)-1-ethyl-carbodiimide hydrochloride" EXACT []

synonym

"EDAC-HCl" EXACT []

synonym

"EDCI" EXACT []

synonym

"EDC-HCl" EXACT []

property_value

bridgeFormula: "-H2 -O1" xsd:string

property_value

monoIsotopicMass: "-18.01056027" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00008 zero-length cross-linker ! zero-length cross-linker

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00105 carbodiimide ! Carbodiimide

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.367. XLMOD:02011 BDP-NHP

Table 369. Term [XLMOD:02011]

id

XLMOD:02011

name

BDP-NHP

def

"Biotin Aspartate Proline n-hydroxyphthalamide." [PSI:XL]

property_value

monoIsotopicMass: "1241.469925525" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

is_cleavable XLMOD:00018 cleavable by MS2 labile bond ! cleavable by MS2 labile bond

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00104 N-hydroxyphthalimide ! N-hydroxyphthalimide

2.368. XLMOD:02012 ANB-NOS

Table 370. Term [XLMOD:02012]

id

XLMOD:02012

name

ANB-NOS

def

"N-5-Azido-2-nitrobenzoyloxysuccinimide." [CAS:60117-35-3, PubChem_Compound:3080866, Beilstein:1555224, MDL:MFCD00054962, ChemSpiderID:2338587, ChemicalBookNo:CB7381289]

synonym

"N-Succinimidyl 5-azido-2-nitrobenzoate" EXACT []

synonym

"5-Azido-2-nitrobenzoic acid N-hydroxysuccinimide ester" EXACT []

synonym

"N-(5-Azido-2-nitrobenzoyloxy)succinimide" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.7" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00107 nitrophenyl azide ! nitrophenyl azide

2.369. XLMOD:02013 BMPS

Table 371. Term [XLMOD:02013]

id

XLMOD:02013

name

BMPS

def

"N-(beta-Maleimidopropyloxy)succinimide ester." [CAS:55750-62-4, PubChem_Compound:4620597, Beilstein:1492578, MDL:MFCD00043141, ChemSpiderID:3811455, ChemicalBookNo:CB5780592]

synonym

"N-Succinimidyl 3-maleimidopropionate" EXACT []

synonym

"3-Maleimidopropionic acid N-hydroxysuccinimide ester" EXACT []

property_value

bridgeFormula: "C7 H5 O3 N1" xsd:string

property_value

monoIsotopicMass: "151.026943065" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "6.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.370. XLMOD:02014 EMCS

Table 372. Term [XLMOD:02014]

id

XLMOD:02014

name

EMCS

def

"6-Maleimidohexanoic acid N-hydroxysuccinimide ester." [CAS:55750-63-5, PubChem_Compound:5091655, ChemSpiderID:4267588, ChemicalBookNo:CB8212960]

synonym

"N-(epsilon-Malaimidocaproyloxy) succinimide ester" EXACT []

synonym

"6-maleimidohexanoic acid N-hydroxysuccinimide ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.4" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.371. XLMOD:02015 GMBS

Table 373. Term [XLMOD:02015]

id

XLMOD:02015

name

GMBS

def

"N-[gamma-Maleimidobutyryloxy] succinimide." [CAS:80307-12-6, PubChem_Compound:133440, MDL:MFCD00036817, ChemSpiderID:117712, ChemicalBookNo:CB5267080]

synonym

"4-Maleimdobutyric acid N-succinimidyl ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.3" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.372. XLMOD:02016 SPDP

Table 374. Term [XLMOD:02016]

id

XLMOD:02016

name

SPDP

def

"N-Succinimidyl 3-[2-pyridyldithio]-propionate." [CAS:68181-17-9, PubChem_Compound:100682, ChemSpiderID:90967, ChemicalBookNo:CB2446059]

synonym

"3-(2-Pyridyldithio)propionic acid N-hydroxysuccinimide ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "6.8" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

2.373. XLMOD:02017 LC-SPDP

Table 375. Term [XLMOD:02017]

id

XLMOD:02017

name

LC-SPDP

def

"Succinimidyl 6-(3-[2-pyridyldithio]-propionamido)hexanoate." [CAS:158913-22-5, PubChem_Compound:157808, ChemSpiderID:138854, ChemicalBookNo:CB8355139]

synonym

"Long chain-SPDP" EXACT []

synonym

"Succinimidyl 6-(3-(2-Pyridyldithio)propionamido)hexanoate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "15.7" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

2.374. XLMOD:02018 Sulfo-LC-SPDP

Table 376. Term [XLMOD:02018]

id

XLMOD:02018

name

Sulfo-LC-SPDP

def

"Sulfosuccinimidyl 6-(3'-[2-pyridyldithio]-propionamido)hexanoate." [CAS:169751-10-4, PubChem_Compound:4588467, ChemSpiderID:3780707, ChemicalBookNo:CB8177681]

synonym

"Sulfo-Long chain-SPDP" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "15.7" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

2.375. XLMOD:02019 MBS

Table 377. Term [XLMOD:02019]

id

XLMOD:02019

name

MBS

def

"m-Maleimidobenzoyl-N-hydroxysuccinimide ester." [CAS:58626-38-3, PubChem_Compound:93861, ChemSpiderID:84714, ChemicalBookNo:CB0342553]

synonym

"3-Maleimidobenzoic acid N-hydroxysuccinimide ester" EXACT []

synonym

"meta-Maleimidobenzoyl-N-hydroxysuccinimide ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.3" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.376. XLMOD:02020 Sulfo-MBS

Table 378. Term [XLMOD:02020]

id

XLMOD:02020

name

Sulfo-MBS

def

"m-Maleimidobenzoyl-N-hydroxysulfosuccinimide ester." [CAS:92921-25-0, ChemSpiderID:111159, ChemicalBookNo:CB9338287]

synonym

"3-Maleimidobenzoic acid N-hydroxysulfosuccinimide ester" EXACT []

synonym

"meta-Maleimidobenzoyl-N-hydroxysulfosuccinimide ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.3" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.377. XLMOD:02021 PDPH

Table 379. Term [XLMOD:02021]

id

XLMOD:02021

name

PDPH

def

"3-[2-Pyridyldithio]propionyl hydrazide." [CAS:115616-51-8, PubChem_Compound:130785, ChemSpiderID:115670, ChemicalBookNo:CB3412468]

synonym

"SPDP Hydrazide" EXACT []

synonym

"S-(2-thiopyridyl)-3-mercaptopropionic acid hydrazide" EXACT []

synonym

"3-(2-pyridyldithio)propionyl hydrazide" EXACT []

synonym

"TPMPH" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.2" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.378. XLMOD:02022 SBA

Table 380. Term [XLMOD:02022]

id

XLMOD:02022

name

SBA

def

"N-Succinimidyl bromoacetate." [CAS:42014-51-7, PubChem_Compound:3565210, ChemSpiderID:2802588, ChemicalBookNo:CB4678610]

synonym

"Bromoacetic acid N-hydroxysuccinimide ester" EXACT []

synonym

"Succinimidyl bromoacetate" EXACT []

synonym

"NHS-Bromoacetate" EXACT []

synonym

"SIB" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "1.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00128 bromoacetyl ! bromoacetyl

2.379. XLMOD:02023 SIA

Table 381. Term [XLMOD:02023]

id

XLMOD:02023

name

SIA

def

"N-Succinimidyl iodoacetate." [CAS:39028-27-8, PubChem_Compound:3299230, ChemSpiderID:2547635, ChemicalBookNo:CB9364435]

synonym

"Iodoacetic acid N-hydroxysuccinimide ester" EXACT []

synonym

"Succinimidyl iodoacetate" EXACT []

synonym

"NHS-Iodoacetate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "1.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00127 iodoacetyl ! iodoacetyl

2.380. XLMOD:02024 SMCC

Table 382. Term [XLMOD:02024]

id

XLMOD:02024

name

SMCC

def

"Succinimidyl-4-[N-maleimidomethyl]cyclohexane-1-carboxylate." [CAS:64987-85-5, PubChem_Compound:125175, ChemSpiderID:21173480, ChemicalBookNo:CB6748487]

synonym

"4-(N-Maleimidomethyl)cyclohexanecarboxylic acid N-hydroxysuccinimide ester" EXACT []

synonym

"N-Succinimidyl 4-(maleimidomethyl)cyclohexanecarboxylate" EXACT []

synonym

"Succinimidyl trans-4-(N-maleimidylmethyl)cyclohexane-1-carboxylate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.381. XLMOD:02025 Sulfo-SMCC

Table 383. Term [XLMOD:02025]

id

XLMOD:02025

name

Sulfo-SMCC

def

"Sulfosuccinimidyl-4-[N-maleimidomethyl]cyclohexane-1-carboxylate." [CAS:92921-24-9, PubChem_Compound:16219679, ChemSpiderID:3809728, ChemicalBookNo:CB6219112]

synonym

"4-(N-Maleimidomethyl)cyclohexane-1-carboxylic acid 3-sulfo-N-hydroxysuccinimide ester" EXACT []

synonym

"Sulfosuccinimidyl-4-N-maleimidomethyl-cyclohexane-1-carboxylate" EXACT []

synonym

"SSMCC" EXACT []

synonym

"S-SMCC" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.382. XLMOD:02026 SMPB

Table 384. Term [XLMOD:02026]

id

XLMOD:02026

name

SMPB

def

"N-Succinimidyl 4-[4-maleimidophenyl]butyrate." [CAS:79886-55-8, PubChem_Compound:100681, ChemSpiderID:90966, ChemicalBookNo:CB3322684]

synonym

"4-(4-Maleimidophenyl)butyric acid N-hydroxysuccinimide ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.383. XLMOD:02027 SMPH

Table 385. Term [XLMOD:02027]

id

XLMOD:02027

name

SMPH

def

"Succinimidyl-6-[beta-maleimidopropionamido]hexanoate." [CAS:367927-39-7, PubChem_Compound:4170355, ChemSpiderID:3381798, ChemicalBookNo:CB2100210]

synonym

"Succinimidyl 6-[(3-maleimido)propionamido]-hexanoate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.3" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

is_cleavable XLMOD:00041 thiol cleavable ! thiol cleavable

2.384. XLMOD:02028 Sulfo-SANPAH

Table 386. Term [XLMOD:02028]

id

XLMOD:02028

name

Sulfo-SANPAH

def

"N-Sulfosuccinimidyl-6-[4'-azido-2'-nitrophenylamino] hexanoate." [CAS:102568-43-4, PubChem_Compound:3035866, ChemSpiderID:2300000, ChemicalBookNo:CB4457477]

synonym

"1-[6-[(4-azido-2-nitro-phenyl)amino]hexanoyloxy]-2,5-Dioxo-pyrrolidine-3-sulfonic acid" EXACT []

synonym

"Sulfosuccinimidyl 6-((4-azido-2-nitrophenyl)amino)hexanoate" EXACT []

synonym

"Sulfosuccinimidyl 6-((4'-azido-2'-nitrophenyl)amino)hexanoate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.2" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00107 nitrophenyl azide ! nitrophenyl azide

2.385. XLMOD:02029 DSP

Table 387. Term [XLMOD:02029]

id

XLMOD:02029

name

DSP

def

"Dithiobis[succinimidyl propionate." [CAS:57757-57-0, PubChem_Compound:93313, Beilstein:1518074, MDL:MFCD00042045, ChemSpiderID:84243, ChemicalBookNo:CB7251791]

synonym

"3,3'-Dithiodipropionic acid di(N-hydroxysuccinimide ester)" EXACT []

synonym

"Di(N-succinimidyl) 3,3'-Dithiodipropionate" EXACT []

synonym

"Dithiobis-succinimidyl propionate" EXACT []

synonym

"Dithio-bis-succinimidyl propionate" EXACT []

synonym

"Dithiobis(succinimidyl propionate)" EXACT []

synonym

"Lomant’s Reagent" EXACT []

synonym

"DTSP" EXACT []

synonym

"DSP-d0" EXACT []

property_value

bridgeFormula: "C6 H6 O2 S2" xsd:string

property_value

monoIsotopicMass: "173.98092087" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "12.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.386. XLMOD:02030 DSP-d8

Table 388. Term [XLMOD:02030]

id

XLMOD:02030

name

DSP-d8

def

"Deuterium labelled Dithiobis[1,1,2,2,2,2,3,3-succinimidyl propionate." [PubChem_Compound:91757796]

property_value

bridgeFormula: "C6 D6 O2 S2" xsd:string

property_value

doubletDeltaMass: "8.05016" xsd:double

property_value

monoIsotopicMass: "182.0314167" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "12.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.387. XLMOD:02031 DSSeb

Table 389. Term [XLMOD:02031]

id

XLMOD:02031

name

DSSeb

def

"Sebacic acid bis[N-hydroxysuccinimide ester]." [CAS:23024-29-5, PubChem_Compound:3430836, ChemSpiderID:2674029, ChemicalBookNo:CB4402699]

synonym

"Disuccinimidyl sebacate" EXACT []

synonym

"Sebacic acid bis(N-hydroxysuccinimide ester)" EXACT []

synonym

"Di(N-succinimidyl) sebacate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.1" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.388. XLMOD:02032 DST

Table 390. Term [XLMOD:02032]

id

XLMOD:02032

name

DST

def

"Disuccinimidyl tartrate." [CAS:62069-75-4, PubChem_Compound:124912, MDL:MFCD03788224, ChemSpiderID:296442, ChemicalBookNo:CB9243998]

synonym

"Disuccinimidyl L-Tartrate" EXACT []

property_value

bridgeFormula: "C4 H2 O4" xsd:string

property_value

monoIsotopicMass: "113.99531" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "6.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00024 periodate cleavable ! periodate cleavable

2.389. XLMOD:02033 DTSSP

Table 391. Term [XLMOD:02033]

id

XLMOD:02033

name

DTSSP

def

"3,3'-Dithiobis[sulfosuccinimidylpropionate]." [CAS:81069-02-5, PubChem_Compound:123933, MDL:MFCD01861949, ChemSpiderID:110462, ChemicalBookNo:CB31073260, PMID:10975572, PMID:18510349]

synonym

"3,3'-Dithiobispropionic Acid Bis-sulfosuccinimidyl Ester" EXACT []

synonym

"Sulfo-DSP" EXACT []

synonym

"Sulfo-DTSP" EXACT []

synonym

"DTBSSP" EXACT []

synonym

"DTSSP-d0" EXACT []

property_value

bridgeFormula: "C6 H6 O2 S2" xsd:string

property_value

monoIsotopicMass: "173.98093" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "12.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.390. XLMOD:02034 EGS

Table 392. Term [XLMOD:02034]

id

XLMOD:02034

name

EGS

def

"Ethylene glycolbis(succinimidylsuccinate)." [CAS:70539-42-3, PubChem_Compound:123663, ChemSpiderID:110243, ChemicalBookNo:CB5722624]

synonym

"Ethylene glycol bis (succinimidylsuccinate)" EXACT []

synonym

"Ethylene Glycol-Bis (Succinic Acid N-Hydroxysuccinimide Ester)" EXACT []

synonym

"EGS-d0" EXACT []

property_value

bridgeFormula: "C10 H10 O6" xsd:string

property_value

monoIsotopicMass: "226.047738" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "16.1" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00025 hydroxylamine cleavable ! hydroxylamine cleavable

relationship

is_cleavable XLMOD:00039 ammonium cleavable ! ammonium cleavable

2.391. XLMOD:02035 Sulfo-EGS

Table 393. Term [XLMOD:02035]

id

XLMOD:02035

name

Sulfo-EGS

def

"Ethylene glycolbis(sulfosuccinimidylsuccinate)." [CAS:167410-92-6, PubChem_Compound:91757793, ChemSpiderID:32034171, ChemicalBookNo:CB4497176]

synonym

"Ethylene glycol bis(sulfosuccinimidylsuccinate)" EXACT []

synonym

"Ethylene Glycol-Bis (Succinic Acid N-Hydroxysulfosuccinimide Ester)" EXACT []

synonym

"Bis(sulfo-N-succinimidyl) ethylene glycol disuccinate" EXACT []

synonym

"Ethylene glycol disuccinate bis(sulfo-N-succinimidyl) ester" EXACT []

synonym

"EGSS" EXACT []

synonym

"EGSS-d0" EXACT []

property_value

bridgeFormula: "C10 H10 O6" xsd:string

property_value

monoIsotopicMass: "226.04774" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "16.1" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00025 hydroxylamine cleavable ! hydroxylamine cleavable

relationship

is_cleavable XLMOD:00039 ammonium cleavable ! ammonium cleavable

2.392. XLMOD:02036 CDI

Table 394. Term [XLMOD:02036]

id

XLMOD:02036

name

CDI

def

"N,N'-Carbonyldiimidazole." [CAS:530-62-1, PubChem_Compound:68263, Beilstein:6826, MDL:MFCD00005286, ChemSpiderID:61561, ChemicalBookNo:CB0215374]

comment

Used to convert alcohols and amines into carbamates, esters, and ureas.

synonym

"1,1'-Carbonyldiimidazole" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00008 zero-length cross-linker ! zero-length cross-linker

2.393. XLMOD:02037 DCC

Table 395. Term [XLMOD:02037]

id

XLMOD:02037

name

DCC

def

"N,N'-Dicyclohexylcarbodiimide." [CAS:538-75-0, PubChem_Compound:10868, Beilstein:610662, MDL:MFCD00011659, ChemSpiderID:10408, ChemicalBookNo:CB9706578]

comment

Used for coupling amines and carboxylates without the insertion of spacer atoms.

synonym

"DCCD" EXACT []

synonym

"DCCI" EXACT []

synonym

"Bis(cyclohexyl)carbodiimide" EXACT []

synonym

"Cyclohexaamine, N,N'-methanetetraylbis-(9CI)" EXACT []

synonym

"Dicyclohexylcarbodiimide" EXACT []

synonym

"N,N'-Dicyclohexylcarbodiimide" EXACT []

synonym

"1,3-Dicyclohexylcarbodiimide" EXACT []

synonym

"N,N'-Methanetetrayl biscyclohexanamine" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00008 zero-length cross-linker ! zero-length cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00105 carbodiimide ! Carbodiimide

2.394. XLMOD:02038 NHS

Table 396. Term [XLMOD:02038]

id

XLMOD:02038

name

NHS

def

"N-hydroxysuccinimide." [CAS:6066-82-6, PubChem_Compound:80170, Beilstein:113913, MDL:MFCD00005516, ChemSpiderID:72416, ChemicalBookNo:CB0391283]

comment

Used in conjunction with EDC-HCl (EDAC-HCl) to convert carboxyl groups to NHS esters which react with primary amines.

synonym

"1-Hydroxy-2,5-pyrrolidinedione" EXACT []

is_a

XLMOD:00008 zero-length cross-linker ! zero-length cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

2.395. XLMOD:02039 Sulfo-NHS

Table 397. Term [XLMOD:02039]

id

XLMOD:02039

name

Sulfo-NHS

def

"N-hydroxysulfosuccinimide." [CAS:106627-54-7, PubChem_Compound:3520574, MDL:MFCD00043100, ChemSpiderID:2759874, ChemicalBookNo:CB9164497]

comment

Used in conjunction with EDC-HCl (EDAC-HCl) to convert carboxyl groups to Sulfo-NHS esters which react with primary amines.

synonym

"Sulfo NHS" EXACT []

synonym

"S-NHS" EXACT []

synonym

"Hydroxy-2,5-Dioxopyrrolidine-3-sulfonicacid" EXACT []

is_a

XLMOD:00008 zero-length cross-linker ! zero-length cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

2.396. XLMOD:02040 BiPS

Table 398. Term [XLMOD:02040]

id

XLMOD:02040

name

BiPS

def

"Bimane bisthiopropionic acid N-succinimidyl ester." [PMID:18838738]

property_value

bridgeFormula: "C16 H16 N2 O4 S2" xsd:string

property_value

monoIsotopicMass: "364.05515" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00034 photo cleavable ! photo cleavable

2.397. XLMOD:02041 formaldehyde

Table 399. Term [XLMOD:02041]

id

XLMOD:02041

name

formaldehyde

def

"Formaldehyde reagent." [CAS:50-00-0, ChemSpiderID:692, ChemicalBookNo:CB4853677, PMID:18438963, PMID:25979347]

property_value

reactionSites: "1" xsd:nonNegativeInteger

property_value

spacerLength: "2.5" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00116 aldehyde group ! aldehyde

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.398. XLMOD:02042 glutardialdehyde

Table 400. Term [XLMOD:02042]

id

XLMOD:02042

name

glutardialdehyde

def

"Glutardialdehyde." [CAS:111-30-8, ChemSpiderID:3365, ChemicalBookNo:CB3762723]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00116 aldehyde group ! aldehyde

relationship

is_reactive_with XLMOD:00037 non-selective ! non-selective

2.399. XLMOD:02043 DSA

Table 401. Term [XLMOD:02043]

id

XLMOD:02043

name

DSA

def

"Disuccinimidyladipic acid." [CAS:26544-38-7, PubChem_Compound:6438029, ChemSpiderID:4515188, ChemicalBookNo:CB5470426]

synonym

"disuccinimidyl adipate" EXACT []

property_value

bridgeFormula: "C6 H6 O2" xsd:string

property_value

monoIsotopicMass: "110.03624" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.400. XLMOD:02044 DNBDPS

Table 402. Term [XLMOD:02044]

id

XLMOD:02044

name

DNBDPS

def

"An isotopically-coded cleavable crosslinker affinity-purifyable with antibodies." [PMID:20109223]

property_value

bridgeFormula: "C12 H9 N2 O6 S2" xsd:string

property_value

monoIsotopicMass: "339.98238" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00054 DNB ! DNB

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.401. XLMOD:02045 TEABS

Table 403. Term [XLMOD:02045]

id

XLMOD:02045

name

TEABS

def

"TEABS cross-linking reagent." [PMID:20109223]

property_value

bridgeFormula: "C28 H39 N5 O11 S1" xsd:string

property_value

monoIsotopicMass: "653.23668" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

is_cleavable XLMOD:00038 DTT cleavable ! DTT cleavable

relationship

is_cleavable XLMOD:00039 ammonium cleavable ! ammonium cleavable

2.402. XLMOD:02046 CLIP

Table 404. Term [XLMOD:02046]

id

XLMOD:02046

name

CLIP

def

"Click-enabled linker for interacting proteins." [PMID:19496583]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.5" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00053 alkyne ! alkyne

relationship

has_neutral_loss_reporter XLMOD:00052 NO2 neutral loss reporter ! NO2 neutral loss reporter

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.403. XLMOD:02047 BDRG

Table 405. Term [XLMOD:02047]

id

XLMOD:02047

name

BDRG

def

"Biotin-aspartate-Rink-glycine cross-linker composed of a biotin affinity handle (B), a pentafluorophenyl (PFP) ester modified aspartate reside (D), a Rink group ®, and a PFP ester modified glycine reside (G)." [PMID:22067100]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

is_cleavable XLMOD:00018 cleavable by MS2 labile bond ! cleavable by MS2 labile bond

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00120 pentafluorophenyl ! pentafluorophenyl

2.404. XLMOD:02048 DTSSP-d8

Table 406. Term [XLMOD:02048]

id

XLMOD:02048

name

DTSSP-d8

def

"Deuterium labelled 3,3'-Dithiobis[sulfosuccinimidylpropionate]." [PMID:10975572, PMID:18510349]

property_value

bridgeFormula: "C6 D6 O2 S2" xsd:string

property_value

doubletDeltaMass: "8.05016" xsd:double

property_value

monoIsotopicMass: "182.03109" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "12.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.405. XLMOD:02049 EGS-d12

Table 407. Term [XLMOD:02049]

id

XLMOD:02049

name

EGS-d12

def

"Deuterium labelled ethylene glycolbis(succinimidylsuccinate)." [PMID:15901824]

property_value

bridgeFormula: "C10 D10 O6" xsd:string

property_value

doubletDeltaMass: "12.07573" xsd:double

property_value

monoIsotopicMass: "238.12347" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "16.1" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00025 hydroxylamine cleavable ! hydroxylamine cleavable

relationship

is_cleavable XLMOD:00039 ammonium cleavable ! ammonium cleavable

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.406. XLMOD:02050 Sulfo-EGS-d12

Table 408. Term [XLMOD:02050]

id

XLMOD:02050

name

Sulfo-EGS-d12

def

"Deuterium labelled ethylene glycolbis(sulfosuccinimidylsuccinate)." [PMID:15901824]

property_value

bridgeFormula: "C10 D10 O6" xsd:string

property_value

doubletDeltaMass: "12.07573" xsd:double

property_value

monoIsotopicMass: "238.12347" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "16.1" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00025 hydroxylamine cleavable ! hydroxylamine cleavable

relationship

is_cleavable XLMOD:00039 ammonium cleavable ! ammonium cleavable

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.407. XLMOD:02051 PCAS

Table 409. Term [XLMOD:02051]

id

XLMOD:02051

name

PCAS

def

"Pyridine-3-Carboxylic Acid Succinimide." [PMID:20050626, PMID:23085224]

synonym

"PCAS-H4" EXACT []

synonym

"PCAS-d0" EXACT []

synonym

"PCASS" EXACT []

property_value

bridgeFormula: "C6 H3 N1 O1" xsd:string

property_value

monoIsotopicMass: "105.02146" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

2.408. XLMOD:02052 PCAS-d4

Table 410. Term [XLMOD:02052]

id

XLMOD:02052

name

PCAS-d4

def

"Pyridine-3-Carboxylic Acid Succinimide." [PMID:20050626, PMID:23085224]

synonym

"PCASS-d4" EXACT []

property_value

bridgeFormula: "C6 D3 N1 O1" xsd:string

property_value

doubletDeltaMass: "4.02508" xsd:double

property_value

monoIsotopicMass: "109.04812" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.409. XLMOD:02053 DSA-13C6

Table 411. Term [XLMOD:02053]

id

XLMOD:02053

name

DSA-13C6

def

"13C labelled disuccinimidyladipic acid." [PSI:XL]

property_value

bridgeFormula: "13C6 H6 O2" xsd:string

property_value

doubletDeltaMass: "6.02016" xsd:double

property_value

monoIsotopicMass: "116.0564" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

2.410. XLMOD:02054 CBDPS-d8

Table 412. Term [XLMOD:02054]

id

XLMOD:02054

name

CBDPS-d8

def

"Deuterium labelled cyanurbiotindipropionylsuccinimide." [PMID:20622150]

property_value

bridgeFormula: "C19 D8 H15 N7 O4 S3" xsd:string

property_value

doubletDeltaMass: "8.05016" xsd:double

property_value

monoIsotopicMass: "517.14698" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.411. XLMOD:02055 CBDPSS

Table 413. Term [XLMOD:02055]

id

XLMOD:02055

name

CBDPSS

def

"Cyanurbiotindimercaptopropionylsulfosuccinimide." [PMID:20622150]

synonym

"Sulfo-CBDPSS" EXACT []

property_value

bridgeFormula: "C19 H23 N7 O4 S3" xsd:string

property_value

monoIsotopicMass: "509.09682" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.412. XLMOD:02056 CBDPSS-d8

Table 414. Term [XLMOD:02056]

id

XLMOD:02056

name

CBDPSS-d8

def

"Deuterium labelled cyanurbiotindimercaptopropionylsulfosuccinimide." [PMID:20622150]

property_value

bridgeFormula: "C19 D8 H15 N7 O4 S3" xsd:string

property_value

doubletDeltaMass: "8.05016" xsd:double

property_value

monoIsotopicMass: "517.14698" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.413. XLMOD:02057 SDH

Table 415. Term [XLMOD:02057]

id

XLMOD:02057

name

SDH

def

"Suberic acid 1,8-dihydrazide." [CAS:20247-84-1, PMID:24938783, ChemSpiderID:520361, ChemicalBookNo:CB8664268]

property_value

bridgeFormula: "C8 H14 N4" xsd:string

property_value

monoIsotopicMass: "166.12184649" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.414. XLMOD:02058 SDH-d12

Table 416. Term [XLMOD:02058]

id

XLMOD:02058

name

SDH-d12

def

"Deuterium labelled suberic acid 1,8-dihydrazide." [PMID:24938783]

property_value

bridgeFormula: "C8 D12 H2 N4" xsd:string

property_value

doubletDeltaMass: "12.07573" xsd:double

property_value

monoIsotopicMass: "178.1971667418" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.415. XLMOD:02059 ADH

Table 417. Term [XLMOD:02059]

id

XLMOD:02059

name

ADH

def

"Adipic acid 1,6-dihydrazide." [CAS:1071-93-8, ChemSpiderID:59505, ChemicalBookNo:CB4129556, PMID:24938783]

property_value

bridgeFormula: "C6 H10 N4" xsd:string

property_value

monoIsotopicMass: "138.09054635" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.416. XLMOD:02060 ADH-d8

Table 418. Term [XLMOD:02060]

id

XLMOD:02060

name

ADH-d8

def

"Deuterium labelled adipic acid 1,6-dihydrazide." [PMID:24938783]

property_value

bridgeFormula: "C6 D8 H2 N4" xsd:string

property_value

doubletDeltaMass: "8.05016" xsd:double

property_value

monoIsotopicMass: "146.140760302" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.417. XLMOD:02061 GDH

Table 419. Term [XLMOD:02061]

id

XLMOD:02061

name

GDH

def

"Glutaric acid 1,5-dihydrazide." [CAS:1508-67-4, ChemSpiderID:3179469, ChemicalBookNo:CB4453510, PMID:24938783]

property_value

bridgeFormula: "C5 H8 N4" xsd:string

property_value

monoIsotopicMass: "124.07489628" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.418. XLMOD:02062 GDH-d6

Table 420. Term [XLMOD:02062]

id

XLMOD:02062

name

GDH-d6

def

"Deuterium labelled glutaric acid 1,5-dihydrazide." [PMID:24938783]

property_value

bridgeFormula: "C5 D6 H2 N4" xsd:string

property_value

doubletDeltaMass: "6.04368" xsd:double

property_value

monoIsotopicMass: "130.112556744" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.419. XLMOD:02063 BS3-d12

Table 421. Term [XLMOD:02063]

id

XLMOD:02063

name

BS3-d12

def

"Deuterium labelled (bis(sulfosuccinimidyl) 2,2,3,3,4,4,5,5,6,6,7,7-suberate)." [PSI:XL]

property_value

doubletDeltaMass: "12.07573" xsd:double

property_value

monoIsotopicMass: "150.14381" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.420. XLMOD:02064 DSG-d6

Table 422. Term [XLMOD:02064]

id

XLMOD:02064

name

DSG-d6

def

"Deuterium labelled disuccinimidyl 2,2,3,3,4,4-glutarate." [PSI:XL]

property_value

bridgeFormula: "C5 D6 O2" xsd:string

property_value

doubletDeltaMass: "6.02016" xsd:double

property_value

monoIsotopicMass: "102.05821" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.421. XLMOD:02065 BS2G-d6

Table 423. Term [XLMOD:02065]

id

XLMOD:02065

name

BS2G-d6

def

"Deuterium labelled bis(sulfosuccinimidyl) 2,2,3,3,4,4-glutarate." [PSI:XL]

synonym

"DSSG-d6" EXACT []

property_value

bridgeFormula: "C5 D4 O2" xsd:string

property_value

doubletDeltaMass: "4.02508" xsd:double

property_value

monoIsotopicMass: "100.046236376" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.422. XLMOD:02066 SATA

Table 424. Term [XLMOD:02066]

id

XLMOD:02066

name

SATA

def

"Succinimidyl acetylthioacetate." [CAS:76931-93-6, PubChem_Compound:127532, ChemSpiderID:113145, ChemicalBookNo:CB6378192]

synonym

"N-succinimidyl S-acetylthioacetate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "2.8" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00144 S-acetyl ! S-acetyl

relationship

is_cleavable XLMOD:00025 hydroxylamine cleavable ! hydroxylamine cleavable

2.423. XLMOD:02067 SATP

Table 425. Term [XLMOD:02067]

id

XLMOD:02067

name

SATP

def

"N-succinimidyl-S-acetylthiopropionate." [CAS:84271-78-3, PubChem_Compound:4110341, ChemSpiderID:3324023, ChemicalBookNo:CB7151156]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "4.1" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00144 S-acetyl ! S-acetyl

relationship

is_cleavable XLMOD:00025 hydroxylamine cleavable ! hydroxylamine cleavable

2.424. XLMOD:02068 LC-SMCC

Table 426. Term [XLMOD:02068]

id

XLMOD:02068

name

LC-SMCC

def

"Succinimidyl 4-(N-maleimidomethyl)cyclohexane-1-carboxy-(6-amidocaproate)." [CAS:125559-00-4, PubChem_Compound:3564731, ChemSpiderID:2802130, ChemicalBookNo:CB2681973]

synonym

"Long chain-SMCC" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "16.2" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.425. XLMOD:02069 PEAS

Table 427. Term [XLMOD:02069]

id

XLMOD:02069

name

PEAS

def

"N-((2-pyridyldithio)ethyl)-4-azidosalicylamide." [MDL:MFCD00467787, PMID:11320237]

synonym

"AES" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

relationship

has_reactive_group XLMOD:00114 aryl azide ! aryl azide

2.426. XLMOD:02070 BisEA

Table 428. Term [XLMOD:02070]

id

XLMOD:02070

name

BisEA

def

"Bis-(2-(Methanethiosulfonato)ethyl)amine." [PSI:XL]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.427. XLMOD:02071 3,6,9,12-Tetraoxatetradecane-1,14-diyl dimethanethiosulfonate

Table 429. Term [XLMOD:02071]

id

XLMOD:02071

name

3,6,9,12-Tetraoxatetradecane-1,14-diyl dimethanethiosulfonate

def

"3,6,9,12-Tetraoxatetradecane-1,14-diyl dimethanethiosulfonate cross-linker." [CAS:212262-08-3, PubChem_Compound:46783053, ChemSpiderID:3765062, ChemicalBookNo:CB4773508]

synonym

"3,6,9,12-Tetraoxatetradecane-1,14-diyl-bis-methanethiosulfonate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.428. XLMOD:02072 3,6,9-Trioxaundecane-1,11-diyl dimethanethiosulfonate

Table 430. Term [XLMOD:02072]

id

XLMOD:02072

name

3,6,9-Trioxaundecane-1,11-diyl dimethanethiosulfonate

def

"3,6,9-Trioxaundecane-1,11-diyl dimethanethiosulfonate cross-linker." [CAS:212262-02-7, PubChem_Compound:5047788, ChemSpiderID:57565984, ChemicalBookNo:CB41175710]

synonym

"3,6,9-Trioxaundecane-1,11-diyl-bismethanethiosulfonate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.429. XLMOD:02073 MTS-1-MTS

Table 431. Term [XLMOD:02073]

id

XLMOD:02073

name

MTS-1-MTS

def

"1,1-Methanediyl Bismethanethiosulfonate." [CAS:22418-52-6, PubChem_Compound:4251850, ChemSpiderID:3459853, ChemicalBookNo:CB01175439]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.430. XLMOD:02074 MTS-2-MTS

Table 432. Term [XLMOD:02074]

id

XLMOD:02074

name

MTS-2-MTS

def

"1,2-Ethanediyl Bismethanethiosulfonate." [CAS:55-95-8, PubChem_Compound:564320, MDL:MFCD01320400, ChemSpiderID:490602, ChemicalBookNo:CB31175450]

synonym

"1,2-Ethanedithiol Dimethanesulfonate" EXACT []

synonym

"Preparation 289" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.431. XLMOD:02075 MTS-6-NHS

Table 433. Term [XLMOD:02075]

id

XLMOD:02075

name

MTS-6-NHS

def

"N-Succinimidyloxycarbonylpentyl methanethiosulfonate." [CAS:76078-81-4, PubChem_Compound:3614736, ChemSpiderID:2849984, ChemicalBookNo:CB6747738]

synonym

"6-[(Methanethisulfonyl)thio]hexanoic acid, N-succinimidyl ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.432. XLMOD:02076 MTS-8-O2-MTS

Table 434. Term [XLMOD:02076]

id

XLMOD:02076

name

MTS-8-O2-MTS

def

"3,6-dioxaoctane-1,8-diyl dimethanethiosulfonate." [CAS:212262-04-9, PubChem_Compound:3332000, ChemSpiderID:2579076, ChemicalBookNo:CB01175712]

synonym

"1,2-bis(2-methylsulfonylsulfanylethoxy)ethane" EXACT []

synonym

"3,6-Dioxaoctane-1,8-diyl Bismethanethiosulfonate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.433. XLMOD:02077 MTS-11-MTS

Table 435. Term [XLMOD:02077]

id

XLMOD:02077

name

MTS-11-MTS

def

"Undecane-1,11-diyl-bismethanethiosulfonate." [PSI:XL]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.434. XLMOD:02078 BSOCOES

Table 436. Term [XLMOD:02078]

id

XLMOD:02078

name

BSOCOES

def

"Bis(2-[Succinimidooxycarbonyloxy]ethyl) sulfone." [CAS:57683-72-4, PubChem_Compound:93771, ChemSpiderID:84638, ChemicalBookNo:CB6488705]

property_value

bridgeFormula: "C6 H6 O6 S1" xsd:string

property_value

monoIsotopicMass: "205.988512" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00061 base cleavable ! base cleavable

2.435. XLMOD:02079 DPDPB

Table 437. Term [XLMOD:02079]

id

XLMOD:02079

name

DPDPB

def

"1,4-Di-(3'-[2’pyridyldithio]-propionamido) butane." [CAS:141647-62-3, PubChem_Compound:4187644, MDL:MFCD00153604, ChemSpiderID:3398412, ChemicalBookNo:CB1775965]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "19.9" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

2.436. XLMOD:02080 Sulfo-DST

Table 438. Term [XLMOD:02080]

id

XLMOD:02080

name

Sulfo-DST

def

"Sulfodisuccinimidyl tartrate." [CAS:118674-04-7, PubChem_Compound:3081171, ChemSpiderID:2338831, ChemicalBookNo:CB2297174]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "6.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00024 periodate cleavable ! periodate cleavable

2.437. XLMOD:02081 Sulfo-GMBS

Table 439. Term [XLMOD:02081]

id

XLMOD:02081

name

Sulfo-GMBS

def

"N-gamma-Maleimidobutyryloxysulfosuccinimide ester." [CAS:185332-92-7, PubChem_Compound:23683309, ChemSpiderID:2678121, ChemicalBookNo:CB4412935]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "6.8" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.438. XLMOD:02082 EMCH

Table 440. Term [XLMOD:02082]

id

XLMOD:02082

name

EMCH

def

"N-(epsilon-Maleimidocaproic acid) hydrazide." [CAS:81186-33-6, PubChem_Compound:4170354, ChemSpiderID:3381797, ChemicalBookNo:CB1298684]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.8" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.439. XLMOD:02083 EMCH-TFA

Table 441. Term [XLMOD:02083]

id

XLMOD:02083

name

EMCH-TFA

def

"N-(epsilon-Maleimidocaproic acid)hydrazide, TriFluoroacetic Acid." [CAS:151038-94-7, PubChem_Compound:23509306, ChemSpiderID:11567960, ChemicalBookNo:CB8349886]

synonym

"2,5-Dihydro-2,5-dioxo-1H-pyrrole-1-hexanoic Acid Hydrazide 2,2,2-Trifluoroacetate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.8" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.440. XLMOD:02084 Sulfo-EMCS

Table 442. Term [XLMOD:02084]

id

XLMOD:02084

name

Sulfo-EMCS

def

"N-(epsilon-Maleimidocaproyloxy) sulfo succinimide ester." [CAS:215312-86-0, PubChem_Compound:4229287, ChemSpiderID:3438266, ChemicalBookNo:CB6793735]

synonym

"6-Maleimidocaproic Acid Sulfo-N-Succinimidyl Ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.4" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.441. XLMOD:02085 PMPI

Table 443. Term [XLMOD:02085]

id

XLMOD:02085

name

PMPI

def

"N-(Maleimidophenyl) isocyanate." [CAS:123457-83-0, PubChem_Compound:129975, ChemSpiderID:115040, ChemicalBookNo:CB7497652]

synonym

"N-(4-Isocyanatophenyl)maleimide" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "8.7" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00124 isocyanate ! isocyanate

2.442. XLMOD:02086 SIAB

Table 444. Term [XLMOD:02086]

id

XLMOD:02086

name

SIAB

def

"N-Succinimidyl(4-iodoacetyl)aminobenzoate." [CAS:72252-96-1, PubChem_Compound:126367, ChemSpiderID:112308, ChemicalBookNo:CB4386384]

synonym

"4-[(2-Iodoacetyl)amino]benzoic Acid 2,5-dioxo-1-pyrrolidinyl Ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "10.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00127 iodoacetyl ! iodoacetyl

2.443. XLMOD:02087 Sulfo-SIAB

Table 445. Term [XLMOD:02087]

id

XLMOD:02087

name

Sulfo-SIAB

def

"N-Sulfosuccinimidyl(4-iodoacetyl)aminobenzoate." [CAS:144650-93-1, PubChem_Compound:4131104, ChemSpiderID:3343983, ChemicalBookNo:CB3328358]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "10.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00127 iodoacetyl ! iodoacetyl

2.444. XLMOD:02088 Sulfo-SMPB

Table 446. Term [XLMOD:02088]

id

XLMOD:02088

name

Sulfo-SMPB

def

"Sulfo succinimidyl 4-(maleimidophenyl) butyrate." [CAS:92921-26-1, PubChem_Compound:118855953, ChemSpiderID:32076952, ChemicalBookNo:CB5324783]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.445. XLMOD:02089 MAL-PEG4-SCM

Table 447. Term [XLMOD:02089]

id

XLMOD:02089

name

MAL-PEG4-SCM

def

"Succinimidyl-[(N-maleimidopropionamido)-tetraethyleneglycol] ester." [CAS:756525-99-2, PubChem_Compound:51340950, ChemSpiderID:32055651, ChemicalBookNo:CB22546917]

synonym

"NHS-PEG4-Maleimide" EXACT []

synonym

"Mal-PEG4-NHS-ester" EXACT []

synonym

"Maleimide-PEG4-NHS" EXACT []

synonym

"Malamido-PEG4-NHS" EXACT []

synonym

"SM[PEG]4" EXACT []

synonym

"O-[N-(3-Maleimidopropionyl)aminoethyl]-O'-[3-(N-succinimidyloxy)-3-oxopropyl]triethylene glycol" EXACT []

synonym

"Succinimidyl-[(N-maleimidopropionamido)-dodecaethyleneglycol] ester" EXACT []

property_value

hydrophilicPEGchain: "4" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "24.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.446. XLMOD:02090 ABH

Table 448. Term [XLMOD:02090]

id

XLMOD:02090

name

ABH

def

"Azidobenzoyl hydrazide." [CAS:63296-32-2, PubChem_Compound:9812912, ChemSpiderID:7988662, ChemicalBookNo:CB0135326]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

2.447. XLMOD:02091 APG

Table 449. Term [XLMOD:02091]

id

XLMOD:02091

name

APG

def

"p-Azidophenyl glyoxal monohydrate." [CAS:1196151-49-1, MDL:MFCD00150595, ChemSpiderID:11564450, ChemicalBookNo:CB3774159]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.3" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

relationship

has_reactive_group XLMOD:00142 phenylglyoxal ! phenylglyoxal

2.448. XLMOD:02092 APDP

Table 450. Term [XLMOD:02092]

id

XLMOD:02092

name

APDP

def

"4-Azido-2-hydroxy-N-(4-{[3-(2-pyridinyldisulfanyl)propanoyl]amino}butyl)benzamide." [ChemSpiderID:8496824, ChemicalBookNo:CB7382675]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "21.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.449. XLMOD:02093 BASED

Table 451. Term [XLMOD:02093]

id

XLMOD:02093

name

BASED

def

"Bis(beta-[4-azidosalicylamido]-ethyl) disulfide." [CAS:199804-21-2, PubChem_Compound:3658531, ChemSpiderID:2891936, ChemicalBookNo:CB3363805]

synonym

"Bis(2-(4-azidosalicylamido)ethyl) disulfide" EXACT []

synonym

"N, N'-(Dithiobis-ethylene)bis(4-azido-2-hydroxy-benzamide)" EXACT []

synonym

"N,N'-Bis(4-azidosalicoyl)cystamine" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "21.3" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.450. XLMOD:02094 NHS-ASA

Table 452. Term [XLMOD:02094]

id

XLMOD:02094

name

NHS-ASA

def

"N-Hydroxysuccinimidyl-4-azidosalicyclic acid." [CAS:96602-46-9, PubChem_Compound:3035647, ChemSpiderID:2299834, PMID:2358439, ChemicalBookNo:CB21334997]

synonym

"1-[(4-Azido-2-hydroxybenzoyl)oxy]-2,5-pyrrolidinedione" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "8.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

2.451. XLMOD:02095 Sulfo-HSAB

Table 453. Term [XLMOD:02095]

id

XLMOD:02095

name

Sulfo-HSAB

def

"N-Hydroxysulfosuccinimidyl-4-azidobenzoate." [CAS:199804-22-3, PubChem_Compound:10290999, ChemSpiderID:8466468, ChemicalBookNo:CB5222018]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

2.452. XLMOD:02096 Sulfo-SAED

Table 454. Term [XLMOD:02096]

id

XLMOD:02096

name

Sulfo-SAED

def

"Sulfosuccinimidyl 2-(7-amino-4-methylcoumarin-3-acetamido)ethyl-1,3-dithiopropionate." [PubChem_Compound:132249, ChemSpiderID:116802]

synonym

"2-SAED" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "23.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00135 azido-methylcoumarin ! azido-methylcoumarin

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.453. XLMOD:02097 Sulfo-SAND

Table 455. Term [XLMOD:02097]

id

XLMOD:02097

name

Sulfo-SAND

def

"Sulfosuccinimidyl 2-(m-azido-o-nitrobenzamido)-ethyl-1,3'-dithiopropionate." [MDL:MFCD02091654]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00107 nitrophenyl azide ! nitrophenyl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.454. XLMOD:02098 SANPAH

Table 456. Term [XLMOD:02098]

id

XLMOD:02098

name

SANPAH

def

"N-Succinimidyl 6-(4-azido-2-nitroanilino)hexanoate." [CAS:64309-05-3, PubChem_Compound:3035550, ChemSpiderID:2299761, ChemicalBookNo:CB2262231]

synonym

"6-(4-Azido-2-nitrophenylamino)hexanoic acid N-hydroxysuccinimide ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.2" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00107 nitrophenyl azide ! nitrophenyl azide

2.455. XLMOD:02099 Sulfo-SADP

Table 457. Term [XLMOD:02099]

id

XLMOD:02099

name

Sulfo-SADP

def

"Sulfosuccinimidyl (4-azidophenyl)-1,3'-dithiopropionate." [CAS:102568-45-6, PubChem_Compound:128116, ChemSpiderID:113597, ChemicalBookNo:CB9210802]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.456. XLMOD:02100 SASD

Table 458. Term [XLMOD:02100]

id

XLMOD:02100

name

SASD

def

"Succinimidyl-2-(azidosalicylamido)ethyl-1,3-dithiopropionate." [CAS:144650-95-3, PubChem_Compound:4071585, ChemSpiderID:3286667, ChemicalBookNo:CB9276943]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.457. XLMOD:02101 Sulfo-SASD

Table 459. Term [XLMOD:02101]

id

XLMOD:02101

name

Sulfo-SASD

def

"Sulfosuccinimidyl-2-(azidosalicylamido)ethyl-1,3-dithiopropionate." [CAS:144650-95-3, PubChem_Compound:6098351, ChemSpiderID:3286667, ChemicalBookNo:CB9276943]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.458. XLMOD:02102 DTTDPS

Table 460. Term [XLMOD:02102]

id

XLMOD:02102

name

DTTDPS

def

"DTTDPS cross-linker." [PMID:20109223]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00024 periodate cleavable ! periodate cleavable

2.459. XLMOD:02103 1,4-diacetalbenzene

Table 461. Term [XLMOD:02103]

id

XLMOD:02103

name

1,4-diacetalbenzene

def

"1,4-diacetalbenzene reagent." [CAS:1074-12-0, PubChem_Compound:14090, ChemSpiderID:13470, ChemicalBookNo:CB3357077, PMID:18936057, PMID:16875836]

synonym

"Phenyldiglyoxal" EXACT []

synonym

"PDG" EXACT []

property_value

monoIsotopicMass: "190.027" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.5" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00115 glyoxal ! glyoxal

2.460. XLMOD:02104 DiBMADPS

Table 462. Term [XLMOD:02104]

id

XLMOD:02104

name

DiBMADPS

def

"Bis(2,5-dioxopyrrolidin-1-yl)3,3'-(3,5-dibromo-4-methylphenylazanediyl)diproponate." [https://getd.libs.uga.edu/pdfs/hoffman_lisabeth_l_201008_phd.pdf]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

relationship

is_labelled XLMOD:00044 mass defect labelled ! mass defect labelled

2.461. XLMOD:02105 DiBBSIAS

Table 463. Term [XLMOD:02105]

id

XLMOD:02105

name

DiBBSIAS

def

"Bis(2,5-dioxopyrrolidin-1-yl) 2,2'-(2,4-dibromophenylsulfonylazanediyl)diacetate." [https://getd.libs.uga.edu/pdfs/hoffman_lisabeth_l_201008_phd.pdf]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

relationship

is_labelled XLMOD:00044 mass defect labelled ! mass defect labelled

2.462. XLMOD:02106 BID

Table 464. Term [XLMOD:02106]

id

XLMOD:02106

name

BID

def

"N-benzyliminodiacetoyloxysuccinimid." [PMID:11212007]

property_value

CID_Fragment: "91" xsd:double

property_value

CID_Fragment: "275.1" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.463. XLMOD:02107 BCCL1

Table 465. Term [XLMOD:02107]

id

XLMOD:02107

name

BCCL1

def

"Bis-(N-hydroxysuccinimidyl) 3-amino-N-biotinoyl-1,5-pentanedioate." [PMID:19412923]

property_value

monoIsotopicMass: "337.10962" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.464. XLMOD:02108 BCCL2

Table 466. Term [XLMOD:02108]

id

XLMOD:02108

name

BCCL2

def

"Bis-(N-hydroxysuccinimidyl) 5-amino-N-biotinoyl-1,9-nonanedioate." [PMID:19412923]

property_value

monoIsotopicMass: "393.17222" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.465. XLMOD:02109 SBC

Table 467. Term [XLMOD:02109]

id

XLMOD:02109

name

SBC

def

"N-succinimidyl p-benzoyldihydrocinnamate." [PMID:19653199, ChemSpiderID:4488161]

property_value

monoIsotopicMass: "236.09" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

2.466. XLMOD:02110 SBDC

Table 468. Term [XLMOD:02110]

id

XLMOD:02110

name

SBDC

def

"Deuterium labelled N-succinimidyl p-benzoyldihydrocinnamate." [PMID:19653199]

synonym

"SBC-d2" EXACT []

property_value

doubletDeltaMass: "2.01254" xsd:double

property_value

monoIsotopicMass: "238.10" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.467. XLMOD:02111 S-Methyl 5,5'-thiodipentanoylhydroxysuccinimidemethylsulfate

Table 469. Term [XLMOD:02111]

id

XLMOD:02111

name

S-Methyl 5,5'-thiodipentanoylhydroxysuccinimidemethylsulfate

def

"S-Methyl 5,5'-thiodipentanoylhydroxysuccinimidemethylsulfate cross-linker." [PMID:19551991]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.468. XLMOD:02112 SuDP

Table 470. Term [XLMOD:02112]

id

XLMOD:02112

name

SuDP

def

"Bisuccinimidyl-succinamyl-aspartyl-proline." [PMID:26091612, PMID:20560670, PMID:17134140]

synonym

"Disuccinimidyl-succinamyl-aspartyl-proline" EXACT []

property_value

CID_Fragment: "97.0528" xsd:double

property_value

CID_Fragment: "197.0324" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.2" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.469. XLMOD:02113 SuDPG

Table 471. Term [XLMOD:02113]

id

XLMOD:02113

name

SuDPG

def

"Bisuccinimidyl-succinamyl-aspartyl-prolyl-glycine." [PMID:26091612, PMID:17134140]

synonym

"Disuccinimidyl-succinamyl-aspartyl-prolyl-glycine" EXACT []

property_value

CID_Fragment: "97.1" xsd:double

property_value

CID_Fragment: "154.1" xsd:double

property_value

CID_Fragment: "197.1" xsd:double

property_value

CID_Fragment: "215.1" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "15.1" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.470. XLMOD:02114 IRCX

Table 472. Term [XLMOD:02114]

id

XLMOD:02114

name

IRCX

def

"Dibenzoyloxysuccinimidylethyl phosphate." [PMID:18517224]

comment

An IR chromogenic crosslinker.

property_value

monoIsotopicMass: "330.0" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "16" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.471. XLMOD:02115 BAMG

Table 473. Term [XLMOD:02115]

id

XLMOD:02115

name

BAMG

def

"Bis(succinimidyl)-3-azidomethyl glutarate." [PMID:17600791]

property_value

monoIsotopicMass: "125.048" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.5" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00042 TCEP cleavable ! TCEP cleavable

2.472. XLMOD:02116 azide-DSG

Table 474. Term [XLMOD:02116]

id

XLMOD:02116

name

azide-DSG

def

"Bis(succinimidyl)-3-azidomethyl glutarate." [PMID:20472459]

property_value

monoIsotopicMass: "211.0" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00055 azide ! azide

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.473. XLMOD:02117 1

Table 475. Term [XLMOD:02117]

id

XLMOD:02117

name

1

def

"Crosslinking reagent 1." [PMID:14698174]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "8.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.474. XLMOD:02118 JMV 3378

Table 476. Term [XLMOD:02118]

id

XLMOD:02118

name

JMV 3378

def

"Crosslinking reagent JMV 3378." [PMID:19902427]

property_value

monoIsotopicMass: "268.0" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00056 CHCA ! CHCA

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.475. XLMOD:02119 BuTuGPG

Table 477. Term [XLMOD:02119]

id

XLMOD:02119

name

BuTuGPG

def

"4-[3-(2-{2-[(2,5-dioxo-pyrrolidin-1-yloxycarbonyl-methyl)-carbamoyl]-pyrrolidin-1-yl}-2-oxo-ethyl)-thioureido]-butyric acid 2,5-dioxo-pyrrolidin-1-yl ester." [PMID:19950134]

synonym

"NHS-butyric acid-thiourea-glycine-proline-glycine-NHS" EXACT []

synonym

"NHS-BuTuGPG-NHS" EXACT []

synonym

"Edman linker" EXACT []

property_value

monoIsotopicMass: "1686.84" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "16.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.476. XLMOD:02120 BuUrBu

Table 478. Term [XLMOD:02120]

id

XLMOD:02120

name

BuUrBu

def

"NHS-amino butyric acid-urea-amino butyric acid-NHS." [CAS:1240387-33-0, PubChem_Compound:86106597, ChemSpiderID:65999926, PMID:30074391, PMID:21157862, PMID:20704385, PMID:25261217, PMID:27428000]

synonym

"NHS-BuUrBu-NHS" EXACT []

synonym

"Disuccinimidyl dibutyric urea" EXACT []

synonym

"DSBU" EXACT []

property_value

CID_Fragment: "85.053" xsd:double

property_value

CID_Fragment: "111.032" xsd:double

property_value

doubletDeltaMass: "25.979" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "12.5" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_neutral_loss_reporter XLMOD:00057 generic neutral loss reporter ! generic neutral loss reporter

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.477. XLMOD:02121 DPS

Table 479. Term [XLMOD:02121]

id

XLMOD:02121

name

DPS

def

"Diphtalimide suberate." [PMID:19994840]

comment

Contains an eight-carbon spacer arm.

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00104 N-hydroxyphthalimide ! N-hydroxyphthalimide

2.478. XLMOD:02122 SBBT

Table 480. Term [XLMOD:02122]

id

XLMOD:02122

name

SBBT

def

"1,1'-(suberoyldioxy)bisbenzotriazole." [PMID:19994840]

comment

Contains an eight-carbon spacer arm.

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00129 hydroxybenzotriazole ! hydroxybenzotriazole

2.479. XLMOD:02123 SBAT

Table 481. Term [XLMOD:02123]

id

XLMOD:02123

name

SBAT

def

"1,1'-(suberoyldioxy)bisazabenzotriazole." [PMID:19994840]

comment

Contains an eight-carbon spacer arm.

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00130 1-hydroxy-7-azabenzotriazole ! 1-hydroxy-7-azabenzotriazole

2.480. XLMOD:02124 SDAD

Table 482. Term [XLMOD:02124]

id

XLMOD:02124

name

SDAD

def

"Succinimidyl 2-([4,4'-azipentanamido]ethyl)-1,3'-dithiopropionate." [PMID:20635431, PMID:25251153]

synonym

"NHS-SS-Diazirine" EXACT []

property_value

monoIsotopicMass: "273.0" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_neutral_loss_reporter XLMOD:00057 generic neutral loss reporter ! generic neutral loss reporter

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.481. XLMOD:02125 Sulfo-SDAD

Table 483. Term [XLMOD:02125]

id

XLMOD:02125

name

Sulfo-SDAD

def

"Sulfosuccinimidyl 2-([4,4'-azipentanamido]ethyl)-1,3'-dithiopropionate." [CAS:1226983-32-9, PubChem_Compound:124202976]

synonym

"Sulfo-NHS-SS-Diazirine" EXACT []

property_value

monoIsotopicMass: "273.0" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_neutral_loss_reporter XLMOD:00057 generic neutral loss reporter ! generic neutral loss reporter

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.482. XLMOD:02126 DSSO

Table 484. Term [XLMOD:02126]

id

XLMOD:02126

name

DSSO

def

"Disuccinimidyl sulfoxide." [PubChem_Compound:86106597, ChemSpiderID:65999926, PMID:20736410, PMID:27417384]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "10.1" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00067 CID cleavable C-S bond ! CID cleavable C-S bond

2.483. XLMOD:02127 DEST

Table 485. Term [XLMOD:02127]

id

XLMOD:02127

name

DEST

def

"Diethylsuberthioimidate." [PubChem_Compound:88869905, ChemSpiderID:67491002, PMID:20795639, PMID:22460622]

property_value

bridgeFormula: "C8 H12 N2" xsd:string

property_value

monoIsotopicMass: "136.10004842" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00131 thioimidate ! thioimidate

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.484. XLMOD:02128 cis-Diamminedichloroplatinum (II)

Table 486. Term [XLMOD:02128]

id

XLMOD:02128

name

cis-Diamminedichloroplatinum (II)

def

"Cis-[Pt(NH3)2Cl2]." [CAS:15663-27-1, PubChem_Compound:441203, ChemSpiderID:76401, ChemicalBookNo:CB9236183, PMID:21591778, PMID:16875836]

synonym

"Cis-platin" EXACT []

synonym

"CPT" EXACT []

property_value

monoIsotopicMass: "225.995" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "4.63" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00132 platinum(II) ! platinum(II)

2.485. XLMOD:02129 DC4

Table 487. Term [XLMOD:02129]

id

XLMOD:02129

name

DC4

def

"DC4 cross-linker containing a DABCO (1,4-diazabicyclo[2.2.2]octane) moiety." [CAS:1374647-94-5, ChemSpiderID:29763722, ChemicalBookNo:CB63152601, PMID:22131227]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00018 cleavable by MS2 labile bond ! cleavable by MS2 labile bond

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

relationship

is_cleavable XLMOD:00040 ISD cleavable ! ISD cleavable

2.486. XLMOD:02130 ASBA

Table 488. Term [XLMOD:02130]

id

XLMOD:02130

name

ASBA

def

"4-(p-Azidosalicylamido)butylamine." [MDL:MFCD00153599, ChemSpiderID:8013538, ChemicalBookNo:CB0295398]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "16.3" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

2.487. XLMOD:02131 SPB

Table 489. Term [XLMOD:02131]

id

XLMOD:02131

name

SPB

def

"Succinimidyl-[4-(psoralen-8-yloxy)]-butyrate." [CAS:129211-47-8, PubChem_Compound:15950836, MDL:MFCD01868521, ChemicalBookNo:CB5449965]

synonym

"NHS-Psoralen" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "8.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00134 psoralen ! psoralen

2.488. XLMOD:02132 Sulfo-NHS-LC-ASA

Table 490. Term [XLMOD:02132]

id

XLMOD:02132

name

Sulfo-NHS-LC-ASA

def

"Sulfosuccinimidyl(4-azido-salicylamido) hexanoate." [CAS:184533-12-8, PubChem_Compound:10162222, ChemSpiderID:8337730, ChemicalBookNo:CB8475750]

synonym

"Sulfo-NHS-Long Chain-ASA" EXACT []

synonym

"SAH" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

2.489. XLMOD:02133 Sulfo-SFAD

Table 491. Term [XLMOD:02133]

id

XLMOD:02133

name

Sulfo-SFAD

def

"Sulfosuccinimidyl(perfluoroazidobenzamido)ethyl-1,3´-dithiopropionate." [CAS:220446-74-2, PubChem_Compound:90471066, ChemSpiderID:30798432, ChemicalBookNo:CB9178443]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00136 perfluoroaryl azide ! perfluoroaryl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.490. XLMOD:02134 SDA

Table 492. Term [XLMOD:02134]

id

XLMOD:02134

name

SDA

def

"Succinimidyl-ester diazirine." [PubChem_Compound:89937136, MDL:MFCD28899672]

synonym

"NHS-Diazirine" EXACT []

property_value

bridgeFormula: "C5 H6 O1" xsd:string

property_value

monoIsotopicMass: "82.04186484" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "3.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

2.491. XLMOD:02135 LC-SDA

Table 493. Term [XLMOD:02135]

id

XLMOD:02135

name

LC-SDA

def

"NHS-LC-Diazirine." [PSI:XL]

synonym

"NHS-LC-Diazirine" EXACT []

synonym

"Long Chain-SDA" EXACT []

synonym

"Succinimidyl 6-(4,4'-azipentanamido)hexanoate" EXACT []

property_value

bridgeFormula: "C11 H12 N1 O2" xsd:string

property_value

monoIsotopicMass: "195.125928855" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "12.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

2.492. XLMOD:02136 Sulfo-SDA

Table 494. Term [XLMOD:02136]

id

XLMOD:02136

name

Sulfo-SDA

def

"Sulfo-NHS-Diazirine." [PubChem_Compound:121371016, PMID:28430416]

synonym

"Sulfosuccinimidyl 4,4'-azipentanoate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "3.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.493. XLMOD:02137 Sulfo-LC-SDA

Table 495. Term [XLMOD:02137]

id

XLMOD:02137

name

Sulfo-LC-SDA

def

"Sulfo-NHS-LC-Diazirine." [CAS:1909307-62-5, PubChem_Compound:124202974, MDL:MFCD28899432]

synonym

"Sulfosuccinimidyl 6-(4,4'-azipentanamido)hexanoate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "12.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

2.494. XLMOD:02138 DMA

Table 496. Term [XLMOD:02138]

id

XLMOD:02138

name

DMA

def

"Dimethyl adipimidate dihydrochloride." [CAS:14620-72-5, PubChem_Compound:25738, ChemSpiderID:34991296, ChemicalBookNo:CB4714688]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "8.6" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00111 imidoester ! imidoester

2.495. XLMOD:02139 DMP

Table 497. Term [XLMOD:02139]

id

XLMOD:02139

name

DMP

def

"Dimethyl pimelimidate dihydrochloride." [CAS:58537-94-3, PubChem_Compound:11402688, ChemSpiderID:10637821, ChemicalBookNo:CB7380424]

synonym

"Dimethyl pimelinediimidate dihydrochloride" EXACT []

property_value

bridgeFormula: "C7 H10 N2" xsd:string

property_value

monoIsotopicMass: "122.08439835" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.2" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00111 imidoester ! imidoester

2.496. XLMOD:02140 DMS

Table 498. Term [XLMOD:02140]

id

XLMOD:02140

name

DMS

def

"Dimethyl suberimidate dihydrochloride." [CAS:34490-86-3, PubChem_Compound:118696, ChemicalBookNo:CB9142806]

synonym

"Dimethyl ester octanediimidic acid dihydrochloride" EXACT []

synonym

"1,8-Dimethoxyoctane-1,8-diyldiammonium dichloride" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00111 imidoester ! imidoester

2.497. XLMOD:02141 DTBP

Table 499. Term [XLMOD:02141]

id

XLMOD:02141

name

DTBP

def

"Dimethyl 3,3'-dithiobispropionimidate dihydrochloride." [CAS:38285-78-8, PubChem_Compound:123988, ChemSpiderID:10628577, ChemicalBookNo:CB5208751]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.9" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00111 imidoester ! imidoester

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.498. XLMOD:02142 Sulfo-BSOCOES

Table 500. Term [XLMOD:02142]

id

XLMOD:02142

name

Sulfo-BSOCOES

def

"Bis(2-[Sulfosuccinimidooxycarbonyloxy]ethyl) sulfone." [CAS:161011-72-9, PubChem_Compound:10232304, ChemicalBookNo:CB62131214, PMID:7356718]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00061 base cleavable ! base cleavable

2.499. XLMOD:02143 BMH

Table 501. Term [XLMOD:02143]

id

XLMOD:02143

name

BMH

def

"1,6-Bis-maleimidohexane." [CAS:4856-87-5, PubChem_Compound:20992, ChemSpiderID:19746, ChemicalBookNo:CB9745265]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "16.1" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.500. XLMOD:02144 DFDNB

Table 502. Term [XLMOD:02144]

id

XLMOD:02144

name

DFDNB

def

"1-5-Difluoro-2,4-dinitrobenzene." [CAS:327-92-4, PubChem_Compound:67598, ChemSpiderID:60919, ChemicalBookNo:CB2488813]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "3.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

is_a

XLMOD:09243 Sanger type reagent ! Sanger type reagent

relationship

has_reactive_group XLMOD:00145 aryl halide ! aryl halide

2.501. XLMOD:02145 SMPT

Table 503. Term [XLMOD:02145]

id

XLMOD:02145

name

SMPT

def

"4-Succinimidyloxycarbonyl-methyl-alpha-(2-pyridyldithio)toluene." [CAS:112241-19-7, PubChem_Compound:130706, MDL:MFCD00083161, ChemSpiderID:115608, ChemicalBookNo:CB5359464]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.2" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

2.502. XLMOD:02146 SDBP

Table 504. Term [XLMOD:02146]

id

XLMOD:02146

name

SDBP

def

"N-hydroxysuccinimidyl-2-3-dibromopropionate." [CAS:118790-78-6, PubChem_Compound:195278, ChemSpiderID:169350, ChemicalBookNo:CB61318997]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00128 bromoacetyl ! bromoacetyl

2.503. XLMOD:02147 HSAB

Table 505. Term [XLMOD:02147]

id

XLMOD:02147

name

HSAB

def

"N-hydroxysuccinimidyl 4-azidobenzoate." [CAS:53053-08-0, PubChem_Compound:122153, MDL:MFCD00054963, ChemSpiderID:108951, ChemicalBookNo:CB5187007]

synonym

"4-Azidobenzoyloxysuccinimide" EXACT []

synonym

"2,5-dioxopyrrolidin-1-yl) 4-azidobenzoate" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

2.504. XLMOD:02148 ASIB

Table 506. Term [XLMOD:02148]

id

XLMOD:02148

name

ASIB

def

"1-(p-azidosalicylamido)-4-(iodoacetamido)butane." [PubChem_Compound:10002006, ChemSpiderID:8177587, ChemicalBookNo:CB3741230]

synonym

"1-(4-Azidosalicylamido)-4-(iodoacetamido)butane" EXACT []

synonym

"4-Azido-2-hydroxy-N-{4-[(iodoacetyl)amino]butyl}benzamide" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.8" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

relationship

has_reactive_group XLMOD:00127 iodoacetyl ! iodoacetyl

2.505. XLMOD:02149 SAND

Table 507. Term [XLMOD:02149]

id

XLMOD:02149

name

SAND

def

"Succinimidyl-2-[m-azido-o-nitrobenzamido]ethyl-1,3'-dithiopropionate." [MDL:MFCD02091654]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00107 nitrophenyl azide ! nitrophenyl azide

relationship

is_cleavable XLMOD:00041 thiol cleavable ! thiol cleavable

2.506. XLMOD:02150 SADP

Table 508. Term [XLMOD:02150]

id

XLMOD:02150

name

SADP

def

"N-Succinimidyl (4-azidophenyl) 1,3´-dithiopropionate." [CAS:74676-98-5, PubChem_Compound:494250, ChemSpiderID:432600, ChemicalBookNo:CB7748141]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.507. XLMOD:02151 PNP-DTP

Table 509. Term [XLMOD:02151]

id

XLMOD:02151

name

PNP-DTP

def

"p-nitrophenyl-2-diazo-3,3,3-trifluoropropionate." [CAS:59733-94-7, PubChem_Compound:5748175, ChemSpiderID:11489106, ChemicalBookNo:CB41358102]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "10.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00107 nitrophenyl azide ! nitrophenyl azide

relationship

has_reactive_group XLMOD:00137 diazo group ! diazo group

2.508. XLMOD:02152 SAED

Table 510. Term [XLMOD:02152]

id

XLMOD:02152

name

SAED

def

"Succinimidyl-2-(7-azido-4-methylcoumarin-3-acetamido)ethyl-1,3'-dithiopropionate." [CAS:139609-20-4,PubChem_Compound:90469951, ChemSpiderID:52563941, ChemicalBookNo:CB5455874, PMID:1597185]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "23.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo-NHS ester

relationship

has_reactive_group XLMOD:00135 azido-methylcoumarin ! azido-methylcoumarin

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.509. XLMOD:02153 Sulfo-SAMCA

Table 511. Term [XLMOD:02153]

id

XLMOD:02153

name

Sulfo-SAMCA

def

"Sulfosuccinimidyl-7-azido-4-methylcoumarin-3-acetate." [CAS:223572-57-4, PubChem_Compound:10137892, ChemSpiderID:8313404, ChemicalBookNo:CB02702784]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "12.8" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00135 azido-methylcoumarin ! azido-methylcoumarin

2.510. XLMOD:02154 MSA

Table 512. Term [XLMOD:02154]

id

XLMOD:02154

name

MSA

def

"Methyl N-succinimidyl adipate." [CAS:118380-06-6, PubChem_Compound:4458286, ChemSpiderID:3657094, ChemicalBookNo:CB3716645]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.2" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.511. XLMOD:02155 Maleimide-PEG2-NHS

Table 513. Term [XLMOD:02155]

id

XLMOD:02155

name

Maleimide-PEG2-NHS

def

"Succinimidyl-[(N-maleimidopropionamido)-diethyleneglycol] ester." [CAS:955094-26-5, PubChem_Compound:51340948, MDL:MFCD11041137, ChemSpiderID:32055652, ChemicalBookNo:CB22501435]

synonym

"NHS-PEG2-Maleimide" EXACT []

synonym

"Malamido-PEG2-NHS" EXACT []

synonym

"Succinimide-Maleimide PEG" EXACT []

synonym

"SM[PEG]2" EXACT []

property_value

hydrophilicPEGchain: "2" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "17.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.512. XLMOD:02156 Maleimide-PEG6-NHS

Table 514. Term [XLMOD:02156]

id

XLMOD:02156

name

Maleimide-PEG6-NHS

def

"Succinimidyl-[(N-maleimidopropionamido)-hexaethyleneglycol] ester." [CAS:1137109-21-7, PubChem_Compound:77078209, MDL:MFCD11041093, ChemSpiderID:32055650, ChemicalBookNo:CB82546919]

synonym

"NHS-PEG6-Maleimide" EXACT []

synonym

"Malamido-PEG6-NHS" EXACT []

synonym

"SM[PEG]6" EXACT []

property_value

hydrophilicPEGchain: "6" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "32.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.513. XLMOD:02157 Maleimide-PEG8-NHS

Table 515. Term [XLMOD:02157]

id

XLMOD:02157

name

Maleimide-PEG8-NHS

def

"Succinimidyl-[(N-maleimidopropionamido)-octaethyleneglycol] ester." [CAS:756525-93-6, PubChem_Compound:57568672, MDL:MFCD11041144, ChemSpiderID:32055649, ChemicalBookNo:CB62546920]

synonym

"NHS-PEG8-Maleimide" EXACT []

synonym

"Malamido-PEG8-NHS" EXACT []

synonym

"SM[PEG]8" EXACT []

property_value

hydrophilicPEGchain: "8" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "39.25" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.514. XLMOD:02158 Maleimide-PEG12-NHS

Table 516. Term [XLMOD:02158]

id

XLMOD:02158

name

Maleimide-PEG12-NHS

def

"Succinimidyl-[(N-maleimidopropionamido)-dodecaethyleneglycol] ester." [CAS:1426151-00-9, PubChem_Compound:51340947, MDL:MFCD11041148, ChemSpiderID:32055629, ChemicalBookNo:CB32750847]

synonym

"NHS-PEG12-Maleimide" EXACT []

synonym

"Malamido-PEG12-NHS" EXACT []

synonym

"SM[PEG]12" EXACT []

property_value

hydrophilicPEGchain: "12" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "53.4" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.515. XLMOD:02159 Maleimide-PEG24-NHS

Table 517. Term [XLMOD:02159]

id

XLMOD:02159

name

Maleimide-PEG24-NHS

def

"Succinimidyl-[(N-maleimidopropionamido)-tetracosaethyleneglycol] ester." [PubChem_Compound:89408683]

synonym

"NHS-PEG24-Maleimide" EXACT []

synonym

"Malamido-PEG24-NHS" EXACT []

synonym

"SM[PEG]24" EXACT []

property_value

hydrophilicPEGchain: "24" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "95.2" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.516. XLMOD:02160 11-Maleimidoundecanoic Acid Sulfo-N-Succinimidyl Ester

Table 518. Term [XLMOD:02160]

id

XLMOD:02160

name

11-Maleimidoundecanoic Acid Sulfo-N-Succinimidyl Ester

def

"11-Maleimidoundecanoic Acid Sulfo-N-Succinimidyl Ester cross-linker." [CAS:211236-68-9, PubChem_Compound:5066232, MDL:MFCD01075057, ChemSpiderID:4243138, ChemicalBookNo:CB51025445]

synonym

"Sulfo-Kmus" EXACT []

property_value

hydrophilicPEGchain: "4" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "15.7" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.517. XLMOD:02161 DTME

Table 519. Term [XLMOD:02161]

id

XLMOD:02161

name

DTME

def

"Dithio-bis-maleimidoethane." [CAS:71865-37-7, PubChem_Compound:191989, MDL:MFCD01863385, ChemSpiderID:166677, ChemicalBookNo:CB3134825]

synonym

"Dithio-bis-maleimidoethane" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.3" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.518. XLMOD:02162 3-N-Maleimidobenzoic Acid N-Succinimidyl Ester

Table 520. Term [XLMOD:02162]

id

XLMOD:02162

name

3-N-Maleimidobenzoic Acid N-Succinimidyl Ester

def

"3-N-Maleimidobenzoic Acid N-Succinimidyl Ester cross-linker." [CAS:58626-38-3, PubChem_Compound:93861, ChemSpiderID:84714, ChemicalBookNo:CB0342553]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.519. XLMOD:02163 N-Succinimidyl 3-(Bromoacetamido)propionate

Table 521. Term [XLMOD:02163]

id

XLMOD:02163

name

N-Succinimidyl 3-(Bromoacetamido)propionate

def

"N-Succinimidyl 3-(Bromoacetamido)propionate cross-linker." [CAS:57159-62-3, PubChem_Compound:4463814, ChemSpiderID:3662399, ChemicalBookNo:CB1123003]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "6.2" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00128 bromoacetyl ! bromoacetyl

2.520. XLMOD:02164 MTS-3-MTS

Table 522. Term [XLMOD:02164]

id

XLMOD:02164

name

MTS-3-MTS

def

"1,3-Propanediyl bismethanethiosulfonate." [CAS:55-96-9, PubChem_Compound:571841, ChemSpiderID:497206, ChemicalBookNo:CB51175454]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.521. XLMOD:02165 MTS-4-MTS

Table 523. Term [XLMOD:02165]

id

XLMOD:02165

name

MTS-4-MTS

def

"1,4-Butanediyl bismethanethiosulfonate." [CAS:55-99-2, PubChem_Compound:241169, ChemSpiderID:210759, ChemicalBookNo:CB11175456]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.522. XLMOD:02166 MTS-5-MTS

Table 524. Term [XLMOD:02166]

id

XLMOD:02166

name

MTS-5-MTS

def

"1,5-Pentanediyl bismethanethiosulfonate." [ChemSpiderID:58967]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.523. XLMOD:02167 MTS-6-MTS

Table 525. Term [XLMOD:02167]

id

XLMOD:02167

name

MTS-6-MTS

def

"1,6-Hexanediyl bismethanethiosulfonate." [CAS:56-01-9, PubChem_Compound:3360826, ChemSpiderID:2606746, ChemicalBookNo:CB61497498]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.524. XLMOD:02168 6-maleimidocaproic acid

Table 526. Term [XLMOD:02168]

id

XLMOD:02168

name

6-maleimidocaproic acid

def

"6-Maleimidocaproic acid cross-linker." [CAS:55750-53-3, PubChem_Compound:573683, MDL:MFCD00043140, ChemSpiderID:498795, ChemicalBookNo:CB6300928]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.4" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00138 carboxyl ! carboxyl

2.525. XLMOD:02169 SFAD

Table 527. Term [XLMOD:02169]

id

XLMOD:02169

name

SFAD

def

"Succinimidyl(perfluoroazidobenzamido)ethyl-1,3´-dithiopropionate." [PubChem_Compound:90471066, ChemSpiderID:30798432, ChemicalBookNo:CB9178443]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00136 perfluoroaryl azide ! perfluoroaryl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.526. XLMOD:02170 LCABH

Table 528. Term [XLMOD:02170]

id

XLMOD:02170

name

LCABH

def

"LCABH cross-linker." [PSI:XL]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.6" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.527. XLMOD:02171 NHS-LC-ASA

Table 529. Term [XLMOD:02171]

id

XLMOD:02171

name

NHS-LC-ASA

def

"Succinimidyl(4-azido-salicylamido) hexanoate." [PSI:XL]

synonym

"NHS-Long Chain-ASA" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00020 iodinatable ! iodinatable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

2.528. XLMOD:02172 AEDP-HCl

Table 530. Term [XLMOD:02172]

id

XLMOD:02172

name

AEDP-HCl

def

"3-([2-Aminoethyl] dithio)-propionic acid hydrochloride." [CAS:351422-31-6, ChemSpiderID:4366598, ChemicalBookNo:CB11564306]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

relationship

has_reactive_group XLMOD:00138 carboxyl ! carboxyl

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.529. XLMOD:02173 AMAS

Table 531. Term [XLMOD:02173]

id

XLMOD:02173

name

AMAS

def

"N-(alpha-Maleimidoacetoxy)-succinimide ester." [CAS:55750-61-3, PubChem_Compound:3299229, ChemSpiderID:2547634, ChemicalBookNo:CB4326351]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "4.4" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.530. XLMOD:02174 BMB

Table 532. Term [XLMOD:02174]

id

XLMOD:02174

name

BMB

def

"1,4-Bis-Maleimidobutane." [CAS:28537-70-4, PubChem_Compound:239576, ChemSpiderID:209301, ChemicalBookNo:CB4131366]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "10.9" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.531. XLMOD:02175 BMDB

Table 533. Term [XLMOD:02175]

id

XLMOD:02175

name

BMDB

def

"1,4-Bis-Maleimidyl-2,3-dihydroxybutane." [ChemSpiderID:4222027, ChemicalBookNo:CB9370889]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "10.2" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

is_cleavable XLMOD:00024 periodate cleavable ! periodate cleavable

2.532. XLMOD:02176 BMOE

Table 534. Term [XLMOD:02176]

id

XLMOD:02176

name

BMOE

def

"Bis-Maleimidoethane." [CAS:5132-30-9, PubChem_Compound:237509, MDL:MFCD00458699, ChemSpiderID:11359915, ChemicalBookNo:CB5476024]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "8.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.533. XLMOD:02177 BMPA

Table 535. Term [XLMOD:02177]

id

XLMOD:02177

name

BMPA

def

"N-beta-Maleimidopropionic acid." [CAS:7423-55-4, PubChem_Compound:573621, ChemSpiderID:498738, ChemicalBookNo:CB1371466]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "5.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00138 carboxyl ! carboxyl

2.534. XLMOD:02178 BMPH

Table 536. Term [XLMOD:02178]

id

XLMOD:02178

name

BMPH

def

"N-(beta-Maleimidopropionic acid)hydrazide." [CAS:359436-60-5, PubChem_Compound:4401583, ChemSpiderID:3602748, ChemicalBookNo:CB0106874]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "8.1" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.535. XLMOD:02179 BM(PEG)2

Table 537. Term [XLMOD:02179]

id

XLMOD:02179

name

BM(PEG)2

def

"1,8-Bis-Maleimidodiethyleneglycol." [CAS:115597-84-7, PubChem_Compound:3690297, MDL:MFCD01096749, ChemSpiderID:2922525, ChemicalBookNo:CB9190751]

synonym

"BM[PEO]2" EXACT []

synonym

"maleimide-PEG2-maleimide" EXACT []

property_value

hydrophilicPEGchain: "2" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.536. XLMOD:02180 BM(PEG)3

Table 538. Term [XLMOD:02180]

id

XLMOD:02180

name

BM(PEG)3

def

"1,8-Bis-Maleimidotriethyleneglycol." [CAS:86099-06-1, PubChem_Compound:3331999, ChemSpiderID:2579075, ChemicalBookNo:CB9190751]

synonym

"BM[PEO]3" EXACT []

synonym

"maleimide-PEG3-maleimide" EXACT []

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "17.8" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.537. XLMOD:02181 BM(PEG)4

Table 539. Term [XLMOD:02181]

id

XLMOD:02181

name

BM(PEG)4

def

"1,11-Bis-Maleimidotetraethyleneglycol." [CAS:86099-06-1, PubChem_Compound:3331999, ChemSpiderID:2579075, ChemicalBookNo:CB8506674]

synonym

"BM[PEO]4" EXACT []

synonym

"maleimide-PEG4-maleimide" EXACT []

property_value

hydrophilicPEGchain: "4" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "19.9" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.538. XLMOD:02182 C6-SANH

Table 540. Term [XLMOD:02182]

id

XLMOD:02182

name

C6-SANH

def

"C6-Succinimidyl 4-hydrazinonicotinate acetone hydrazone." [CAS:937249-76-8, ChemicalBookNo:CB9456561]

comment

SANH with extended six carbon linker.

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.4" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00143 hydrazone ! hydrazone

2.539. XLMOD:02183 C6-4-SFB

Table 541. Term [XLMOD:02183]

id

XLMOD:02183

name

C6-4-SFB

def

"C6-Succinimidyl 4-formylbenzoate." [CAS:1005773-18-1, ChemicalBookNo:CB0456285]

comment

SFB with extended six carbon linker.

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00141 carbonyl ! carbonyl

2.540. XLMOD:02184 SBAP

Table 542. Term [XLMOD:02184]

id

XLMOD:02184

name

SBAP

def

"Succinimdyl 3-(bromoacetamido)propionate." [CAS:57159-62-3, PubChem_Compound:4463814, ChemSpiderID:3662399, ChemicalBookNo:CB1123003]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "6.2" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00128 bromoacetyl ! bromoacetyl

2.541. XLMOD:02185 SFB

Table 543. Term [XLMOD:02185]

id

XLMOD:02185

name

SFB

def

"Succinimidyl 4-formylbenzoate." [CAS:60444-78-2, PubChem_Compound:4126130, ChemSpiderID:3339198, ChemicalBookNo:CB7361809]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "5.8" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00141 carbonyl ! carbonyl

2.542. XLMOD:02186 SHTH

Table 544. Term [XLMOD:02186]

id

XLMOD:02186

name

SHTH

def

"Succinimidyl 4-hydrazidoterephthalate hydrochloride." [PSI:XL]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.543. XLMOD:02187 Sulfo-KMUS

Table 545. Term [XLMOD:02187]

id

XLMOD:02187

name

Sulfo-KMUS

def

"N-(kappa-maleimidoundecanoyloxy)sulfosuccinimide ester." [CAS:220935-13-7, PubChem_Compound:5066232, ChemSpiderID:4243138, ChemicalBookNo:CB2774516]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "19.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.544. XLMOD:02188 THPP

Table 546. Term [XLMOD:02188]

id

XLMOD:02188

name

THPP

def

"beta-(tris[hydroxymethyl]phosphine)propionic acid." [CAS:15931-64-3, PubChem_Compound:4095799, ChemSpiderID:3310006, ChemicalBookNo:CB2497718]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "3.03" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00138 carboxyl ! carboxyl

relationship

has_reactive_group XLMOD:00139 hydroxymethyl phosphine ! hydroxymethyl phosphine

2.545. XLMOD:02189 EMCA

Table 547. Term [XLMOD:02189]

id

XLMOD:02189

name

EMCA

def

"N-epsilon-Maleimidocaproic acid." [CAS:55750-53-3, PubChem_Compound:573683, ChemSpiderID:2006116, ChemicalBookNo:CB6300928]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.4" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00138 carboxyl ! carboxyl

2.546. XLMOD:02190 HBVS

Table 548. Term [XLMOD:02190]

id

XLMOD:02190

name

HBVS

def

"1,6-Hexane-bis-vinylsulfone." [ChemicalBookNo:CB02711432, MDL:MFCD01866933]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "14.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00140 vinyl sulfone ! vinyl sulfone

2.547. XLMOD:02191 KMUA

Table 549. Term [XLMOD:02191]

id

XLMOD:02191

name

KMUA

def

"N-kappa-Maleimidoundecanoic acid." [CAS:57079-01-3, PubChem_Compound:4618600, ChemSpiderID:3809539, ChemicalBookNo:CB41175477]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "15.7" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00138 carboxyl ! carboxyl

2.548. XLMOD:02192 KMUH

Table 550. Term [XLMOD:02192]

id

XLMOD:02192

name

KMUH

def

"N-(kappa-Maleimidoundecanoic acid)hydrazide." [CAS:359436-62-7, PubChem_Compound:4438236, ChemSpiderID:3637842, ChemicalBookNo:CB71175478]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "19.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_cleavable XLMOD:00041 thiol cleavable ! thiol cleavable

2.549. XLMOD:02193 MPBH

Table 551. Term [XLMOD:02193]

id

XLMOD:02193

name

MPBH

def

"4-(4-N-Maleimidophenyl)butyric acid hydrazide-HCl." [PubChem_Compound:9904748, ChemSpiderID:8080402, ChemicalBookNo:CB0734136]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "17.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_cleavable XLMOD:00041 thiol cleavable ! thiol cleavable

2.550. XLMOD:02194 SANH

Table 552. Term [XLMOD:02194]

id

XLMOD:02194

name

SANH

def

"Succinimidyl-2-(m-azido-o-nitrobenzamido)ethyl 1,3'-dithiopropionate." [ChemSpiderID:32034301, ChemicalBookNo:CB8354354]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "6.7" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00143 hydrazone ! hydrazone

2.551. XLMOD:02195 SAND-PR

Table 553. Term [XLMOD:02195]

id

XLMOD:02195

name

SAND-PR

def

"Sulfosuccinimidyl-2-(m-azido-o-nitrobenzamido)ethyl 1,3'-dithiopropionate." [CAS:112820-42-5, MDL:MFCD02091654, ChemSpiderID:115619, ChemicalBookNo:CB71367710]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "6.7" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00143 hydrazone ! hydrazone

2.552. XLMOD:02196 Sulfo-SAPD

Table 554. Term [XLMOD:02196]

id

XLMOD:02196

name

Sulfo-SAPD

def

"Sulfosuccinimidyl 2-(4-azidosalicylamido) ethyl-1,3-dithioproprioonate." [ChemicalBookNo:CB5476059]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

2.553. XLMOD:02197 SAPD

Table 555. Term [XLMOD:02197]

id

XLMOD:02197

name

SAPD

def

"Succinimidyl 2-(4-azidosalicylamido) ethyl-1,3-dithioproprioonate." [ChemicalBookNo:CB5476059]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00125 hydroxyphenyl azide ! hydroxyphenyl azide

2.554. XLMOD:02198 BS(PEG)5

Table 556. Term [XLMOD:02198]

id

XLMOD:02198

name

BS(PEG)5

def

"Bis(sulfosuccinimidyl)suberate pentaethyleneglycol." [CAS:756526-03-1, PubChem_Compound:51340935, ChemSpiderID:28604877, ChemicalBookNo:CB12663893]

synonym

"NHS-PEG5-NHS" EXACT []

property_value

bridgeFormula: "C14 H22 O7" xsd:string

property_value

hydrophilicPEGchain: "5" xsd:nonNegativeInteger

property_value

monoIsotopicMass: "302.13655" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "21.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

2.555. XLMOD:02199 BS(PEG)9

Table 557. Term [XLMOD:02199]

id

XLMOD:02199

name

BS(PEG)9

def

"Bis(sulfosuccinimidyl)suberate nonaethyleneglycol." [CAS:1008402-79-6, PubChem_Compound:77078480, ChemSpiderID:29354490, ChemicalBookNo:CB32546994]

synonym

"NHS-PEG9-NHS" EXACT []

property_value

hydrophilicPEGchain: "9" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "35.8" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

2.556. XLMOD:02200 NHS-azide

Table 558. Term [XLMOD:02200]

id

XLMOD:02200

name

NHS-azide

def

"N-hydroxysuccinimide ester ethane azide." [PSI:XL]

synonym

"Azido-NHS ester" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "2.5" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.557. XLMOD:02201 NHS-PEG4-azide

Table 559. Term [XLMOD:02201]

id

XLMOD:02201

name

NHS-PEG4-azide

def

"N-hydroxysuccinimide ester tetraoxapentadecane azide." [CAS:944251-24-5, PubChem_Compound:51340931, ChemSpiderID:28604876, ChemicalBookNo:CB72663895]

synonym

"Azido-PEG4-NHS ester" EXACT []

property_value

hydrophilicPEGchain: "4" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "18.9" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.558. XLMOD:02202 NHS-PEG12-azide

Table 560. Term [XLMOD:02202]

id

XLMOD:02202

name

NHS-PEG12-azide

def

"N-hydroxysuccinimide ester dodecaoxanonatriacontane azide." [CAS:1610796-02-5, PubChem_Compound:51340930, ChemSpiderID:29354441, ChemicalBookNo:CB63062337]

synonym

"Azido-PEG12-NHS ester" EXACT []

property_value

hydrophilicPEGchain: "12" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "47.3" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.559. XLMOD:02203 SPDP-PEG4-NHS ester

Table 561. Term [XLMOD:02203]

id

XLMOD:02203

name

SPDP-PEG4-NHS ester

def

"2-pyridyldithiol-tetraoxatetradecane-N-hydroxysuccinimide." [CAS:1334177-95-5, PubChem_Compound:77078429, ChemSpiderID:29354407, ChemicalBookNo:CB83163140]

synonym

"PEG4-SPDP" EXACT []

property_value

hydrophilicPEGchain: "4" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "25.7" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

2.560. XLMOD:02204 SPDP-PEG12-NHS ester

Table 562. Term [XLMOD:02204]

id

XLMOD:02204

name

SPDP-PEG12-NHS ester

def

"2-pyridyldithiol-tetraoxaoctatriacontane-N-hydroxysuccinimide." [PubChem_Compound:51341026, ChemicalBookNo:CB53163134]

synonym

"PEG12-SPDP" EXACT []

property_value

hydrophilicPEGchain: "12" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "54.1" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

2.561. XLMOD:02205 BPM

Table 563. Term [XLMOD:02205]

id

XLMOD:02205

name

BPM

def

"4-(N-Maleimido)benzophenone." [CAS:92944-71-3, PubChem_Compound:24897368, MDL:MFCD00079465, ChemSpiderID:129121, ChemicalBookNo:CB6293028]

synonym

"Benzophenone-4-maleimide" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

2.562. XLMOD:02206 TPAL

Table 564. Term [XLMOD:02206]

id

XLMOD:02206

name

TPAL

def

"1,4-Phthalaldehyde." [CAS:623-27-8, PubChem_Compound:12173, ChemSpiderID:11673, ChemicalBookNo:CB1425781]

property_value

bridgeFormula: "C8 H6" xsd:string

property_value

monoIsotopicMass: "102.04695021" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00141 carbonyl ! carbonyl

2.563. XLMOD:02207 DEB

Table 565. Term [XLMOD:02207]

id

XLMOD:02207

name

DEB

def

"Diformyl-5-ethynylbenzene." [ChemSpiderID:26667536]

synonym

"4-Ethynylphthalaldehyde" EXACT []

property_value

bridgeFormula: "C10 H6" xsd:string

property_value

monoIsotopicMass: "126.04695021" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00141 carbonyl ! carbonyl

2.564. XLMOD:02208 DMTMM

Table 566. Term [XLMOD:02208]

id

XLMOD:02208

name

DMTMM

def

"4-(4,6-Dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride." [CAS:3945-69-5, PubChem_Compound:2734059, ChemSpiderID:2015817, ChemicalBookNo:CB5695021, PMID:24938783]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00146 dimethylether ! dimethylether

2.565. XLMOD:02209 PDH

Table 567. Term [XLMOD:02209]

id

XLMOD:02209

name

PDH

def

"Pimelic acid dihydrazide." [CAS:13043-98-6, PubChem_Compound:284646, ChemSpiderID:250842, ChemicalBookNo:CB9261011]

synonym

"Heptanedihydrazide" EXACT []

property_value

bridgeFormula: "C7 H12 N4" xsd:string

property_value

monoIsotopicMass: "152.10619642" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.566. XLMOD:02210 PDH-d10

Table 568. Term [XLMOD:02210]

id

XLMOD:02210

name

PDH-d10

def

"Deuterium labelled pimelic acid dihydrazide." [PSI:XL]

property_value

bridgeFormula: "C7 D10 H2 N4" xsd:string

property_value

doubletDeltaMass: "10.06276744" xsd:double

property_value

monoIsotopicMass: "162.16896386" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.567. XLMOD:02211 ABAS

Table 569. Term [XLMOD:02211]

id

XLMOD:02211

name

ABAS

def

"Azidobenzoic acid succinimide." [CAS:53053-08-0, PubChem_Compound:122153, ChemSpiderID:108951, ChemicalBookNo:CB5187007, PMID:25192908]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.568. XLMOD:02212 ABAS-13C6

Table 570. Term [XLMOD:02212]

id

XLMOD:02212

name

ABAS-13C6

def

"13C labelled azidobenzoic acid succinimide." [PMID:25192908]

property_value

doubletDeltaMass: "6.02016" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

2.569. XLMOD:02213 CBS

Table 571. Term [XLMOD:02213]

id

XLMOD:02213

name

CBS

def

"Carboxy-benzophenone-succinimide." [PMID:25192908]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

2.570. XLMOD:02214 CBS-13C6

Table 572. Term [XLMOD:02214]

id

XLMOD:02214

name

CBS-13C6

def

"13C labelled carboxy-benzophenone-succinimide." [PMID:25192908]

property_value

doubletDeltaMass: "6.02016" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "7.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

2.571. XLMOD:02215 SDA-13C5

Table 573. Term [XLMOD:02215]

id

XLMOD:02215

name

SDA-13C5

def

"13C labelled succinimidyl-ester diazirine." [PMID:25192908]

property_value

bridgeFormula: "13C5 H6 O1" xsd:string

property_value

doubletDeltaMass: "5.0168" xsd:double

property_value

monoIsotopicMass: "87.05866484" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "5.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00103 diazirine ! diazirine

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

2.572. XLMOD:02216 DMDSSO

Table 574. Term [XLMOD:02216]

id

XLMOD:02216

name

DMDSSO

def

"Dimethyl disuccinimidyl sulfoxide." [PMID:24471733, PMID:27417384]

synonym

"DMDSSO-d0" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00067 CID cleavable C-S bond ! CID cleavable C-S bond

2.573. XLMOD:02217 DMDSSO-d10

Table 575. Term [XLMOD:02217]

id

XLMOD:02217

name

DMDSSO-d10

def

"Deuterium labelled dimethyl disuccinimidyl sulfoxide." [PMID:24471733]

property_value

doubletDeltaMass: "10.06276744" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_cleavable XLMOD:00067 CID cleavable C-S bond ! CID cleavable C-S bond

2.574. XLMOD:02218 ICATXL1

Table 576. Term [XLMOD:02218]

id

XLMOD:02218

name

ICATXL1

def

"N-biotinyl-N'-[3,5-Bis-(N-succinimidyloxycarbonyl-methoxy)-benzoyl]-ethane-1,2-diamine." [PMID:16895390]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.575. XLMOD:02219 ICATXL2

Table 577. Term [XLMOD:02219]

id

XLMOD:02219

name

ICATXL2

def

"S-S-biotinyl-N'-[3,5-Bis-(N-succinimidyloxycarbonyl-methoxy)-benzoyl]-ethane-1,2-diamine." [PMID:16895390]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.576. XLMOD:02220 SSTN

Table 578. Term [XLMOD:02220]

id

XLMOD:02220

name

SSTN

def

"Succinic acid succinimidyl ester 5-thioyloxy-2-nitrobenzyl ester." [PMID:15366956]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00148 nitrobenzylester ! nitrobenzylester

2.577. XLMOD:02221 SCNE

Table 579. Term [XLMOD:02221]

id

XLMOD:02221

name

SCNE

def

"Di 6-(3-succinimidyl carbonyloxymethyl-4-nitro-phenoxy)-hexanoic acid disulfide diethanol ester." [PMID:22432929]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

relationship

is_cleavable XLMOD:00147 photocleavable ! photocleavable

2.578. XLMOD:02222 azide-A-DSBSO

Table 580. Term [XLMOD:02222]

id

XLMOD:02222

name

azide-A-DSBSO

def

"Azide-tagged acid-cleavable disuccinimidyl-bissulfoxide." [PMID:25823605, PMID:27417384, PMID:25253489]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00055 azide ! azide

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00018 cleavable by MS2 labile bond ! cleavable by MS2 labile bond

relationship

is_cleavable XLMOD:00066 acid cleavable ! acid cleavable

relationship

is_cleavable XLMOD:00067 CID cleavable C-S bond ! CID cleavable C-S bond

2.579. XLMOD:02223 alkyne-A-DSBSO

Table 581. Term [XLMOD:02223]

id

XLMOD:02223

name

alkyne-A-DSBSO

def

"Alkyne-tagged acid-cleavable disuccinimidyl-bissulfoxide." [PMID:25823605, PMID:29537042]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00053 alkyne ! alkyne

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00066 acid cleavable ! acid cleavable

relationship

is_cleavable XLMOD:00067 CID cleavable C-S bond ! CID cleavable C-S bond

2.580. XLMOD:02224 IML 3

Table 582. Term [XLMOD:02224]

id

XLMOD:02224

name

IML 3

def

"Identical mass linker 3." [PMID:26269432]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.581. XLMOD:02225 SuVP

Table 583. Term [XLMOD:02225]

id

XLMOD:02225

name

SuVP

def

"Disuccinimidyl-succinamyl-valyl-proline." [PMID:26091612, PMID:20560670]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.2" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.582. XLMOD:02226 DHSO

Table 584. Term [XLMOD:02226]

id

XLMOD:02226

name

DHSO

def

"Dihydrazide sulfoxide." [PMID:27417384]

synonym

"3,3'-sulfinyldi(propanehydrazide)" EXACT []

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "12.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_cleavable XLMOD:00067 CID cleavable C-S bond ! CID cleavable C-S bond

2.583. XLMOD:02227 PL

Table 585. Term [XLMOD:02227]

id

XLMOD:02227

name

PL

def

"Photo-cleavable Leiker." [PMID:26952210, PMID:27734140]

property_value

CID_Fragment: "122.06" xsd:double

property_value

monoIsotopicMass: "316.14" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00147 photocleavable ! photocleavable

2.584. XLMOD:02228 PEG-PL

Table 586. Term [XLMOD:02228]

id

XLMOD:02228

name

PEG-PL

def

"Polyethylene glycol photo-cleavable Leiker." [PMID:26952210]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00147 photocleavable ! photocleavable

2.585. XLMOD:02229 Sulfo-PL

Table 587. Term [XLMOD:02229]

id

XLMOD:02229

name

Sulfo-PL

def

"Sulfo-photo-cleavable Leiker." [PMID:26952210]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00147 photocleavable ! photocleavable

2.586. XLMOD:02230 bAL1

Table 588. Term [XLMOD:02230]

id

XLMOD:02230

name

bAL1

def

"Biotinylated azo-Leiker 1 with an azobenzene-based chemical cleavage site." [PMID:26952210]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.3" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00017 chemically cleavable ! chemically cleavable

2.587. XLMOD:02231 bAL2

Table 589. Term [XLMOD:02231]

id

XLMOD:02231

name

bAL2

def

"Biotinylated azo-Leiker 2 with an azobenzene-based chemical cleavage site." [PMID:26952210]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.3" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00017 chemically cleavable ! chemically cleavable

2.588. XLMOD:02232 bAL2-d6

Table 590. Term [XLMOD:02232]

id

XLMOD:02232

name

bAL2-d6

def

"Deuterium labelled biotinylated azo-Leiker 2 with an azobenzene-based chemical cleavage site." [PMID:26952210]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.3" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_cleavable XLMOD:00017 chemically cleavable ! chemically cleavable

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.589. XLMOD:02233 BS3-18O2

Table 591. Term [XLMOD:02233]

id

XLMOD:02233

name

BS3-18O2

def

"18O labelled (bis(sulfosuccinimidyl) 2,2,7,7-suberate)." [PMID:14592499]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "11.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

is_labelled XLMOD:00069 18O labelled ! 18O labelled

2.590. XLMOD:02234 PIR-I

Table 592. Term [XLMOD:02234]

id

XLMOD:02234

name

PIR-I

def

"Protein Interaction Reporter-I." [PMID:17269728]

property_value

bridgeFormula: "C6 H10 O2 N1" xsd:string

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

monoIsotopicMass: "128.0712" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

reporterMass: "555.2481" xsd:double

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.591. XLMOD:02235 PIR-II

Table 593. Term [XLMOD:02235]

id

XLMOD:02235

name

PIR-II

def

"Protein Interaction Reporter-II." [PMID:17269728]

property_value

bridgeFormula: "C4 H6 O2 N1" xsd:string

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

monoIsotopicMass: "100.0399" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

reporterMass: "1324.5937" xsd:double

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.592. XLMOD:02236 PIR-III

Table 594. Term [XLMOD:02236]

id

XLMOD:02236

name

PIR-III

def

"Protein Interaction Reporter-III." [PMID:17269728]

property_value

bridgeFormula: "C4 H6 O2 N1" xsd:string

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

monoIsotopicMass: "100.0399" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

reporterMass: "1604.6996" xsd:double

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00034 photo cleavable ! photo cleavable

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.593. XLMOD:02237 PIR

Table 595. Term [XLMOD:02237]

id

XLMOD:02237

name

PIR

def

"Protein Interaction Reporter." [PMID:15623310]

property_value

CID_Fragment: "711.4" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.594. XLMOD:02238 pcPIR

Table 596. Term [XLMOD:02238]

id

XLMOD:02238

name

pcPIR

def

"Photo-cleavable Protein Interaction Reporter." [PMID:20373789]

property_value

CID_Fragment: "711.4" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "40.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00034 photo cleavable ! photo cleavable

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.595. XLMOD:02239 PEG5-Biotin-Dimer

Table 597. Term [XLMOD:02239]

id

XLMOD:02239

name

PEG5-Biotin-Dimer

def

"PEG5-Biotin-Dimer for crosslinking avidin molecules." [PSI:XL]

property_value

hydrophilicPEGchain: "5" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "43.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00118 tetrafluorophenyl azide ! tetrafluorophenyl azide

2.596. XLMOD:02240 Azido-PEG3-NHS ester

Table 598. Term [XLMOD:02240]

id

XLMOD:02240

name

Azido-PEG3-NHS ester

def

"1-[(3-{2-[2-(2-Azidoethoxy)ethoxy]ethoxy}propanoyl)oxy]-2,5-pyrrolidinedione." [CAS:1245718-89-1, PubChem_Compound:77078451, ChemSpiderID:29354443, ChemicalBookNo:CB83062351]

synonym

"NHS-PEG3-azide" EXACT []

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.597. XLMOD:02241 Azido-PEG5-NHS ester

Table 599. Term [XLMOD:02241]

id

XLMOD:02241

name

Azido-PEG5-NHS ester

def

"1-[(1-Azido-18-oxo-3,6,9,12,15-pentaoxaoctadecan-18-yl)oxy]-2,5-pyrrolidinedione." [CAS:1433996-86-1, PubChem_Compound:77078433, ChemSpiderID:29354411, ChemicalBookNo:CB23062364]

synonym

"NHS-PEG5-azide" EXACT []

property_value

hydrophilicPEGchain: "5" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.598. XLMOD:02242 Azido-PEG6-NHS ester

Table 600. Term [XLMOD:02242]

id

XLMOD:02242

name

Azido-PEG6-NHS ester

def

"1-[(1-Azido-21-oxo-3,6,9,12,15,18-hexaoxahenicosan-21-yl)oxy]-2,5-pyrrolidinedione." [CAS:2055014-64-5, PubChem_Compound:77078479, ChemSpiderID:29354488, ChemicalBookNo:CB43162882]

synonym

"NHS-PEG6-azide" EXACT []

property_value

hydrophilicPEGchain: "6" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.599. XLMOD:02243 Azido-PEG8-NHS ester

Table 601. Term [XLMOD:02243]

id

XLMOD:02243

name

Azido-PEG8-NHS ester

def

"1-[(1-Azido-27-oxo-3,6,9,12,15,18,21,24-octaoxaheptacosan-27-yl)oxy]-2,5-pyrrolidinedione." [CAS:1204834-00-3, PubChem_Compound:51340932, ChemSpiderID:29354442, ChemicalBookNo:CB53062370]

synonym

"NHS-PEG8-azide" EXACT []

property_value

hydrophilicPEGchain: "8" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.600. XLMOD:02244 Azido-PEG10-NHS ester

Table 602. Term [XLMOD:02244]

id

XLMOD:02244

name

Azido-PEG10-NHS ester

def

"Azido-PEG10-NHS ester." [PubChem_Compound:134159750]

synonym

"NHS-PEG10-azide" EXACT []

property_value

hydrophilicPEGchain: "10" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.601. XLMOD:02245 Azido-PEG16-NHS ester

Table 603. Term [XLMOD:02245]

id

XLMOD:02245

name

Azido-PEG16-NHS ester

def

"Azido-PEG16-NHS ester." [PubChem_Compound:126480441]

synonym

"NHS-PEG16-azide" EXACT []

property_value

hydrophilicPEGchain: "16" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.602. XLMOD:02246 Azido-PEG24-NHS ester

Table 604. Term [XLMOD:02246]

id

XLMOD:02246

name

Azido-PEG24-NHS ester

def

"Azido-PEG24-NHS ester." [PubChem_Compound:126480440]

synonym

"NHS-PEG24-azide" EXACT []

property_value

hydrophilicPEGchain: "24" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.603. XLMOD:02247 SPDP-PEG24-NHS ester

Table 605. Term [XLMOD:02247]

id

XLMOD:02247

name

SPDP-PEG24-NHS ester

def

"2,5-Dioxocyclopentyl 77-oxo-79-(2-pyridinyldisulfanyl)-4,7,10,13,16,19,22,25,28,31,34,37,40,43,46,49,52,55,58,61,64,67,70,73-tetracosaoxa-76-azanonaheptacontan-1-oate." [PubChem_Compound:77078309, ChemSpiderID:32055782, ChemicalBookNo:CB13163136]

synonym

"PEG24-SPDP" EXACT []

property_value

hydrophilicPEGchain: "24" xsd:nonNegativeInteger

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00109 pyridinyldisulfide ! pyridinyldisulfide

2.604. XLMOD:02248 S-Methyl 5,5'-thiodipentanoylhydroxysuccinimide

Table 606. Term [XLMOD:02248]

id

XLMOD:02248

name

S-Methyl 5,5'-thiodipentanoylhydroxysuccinimide

def

"S-Methyl 5,5'-thiodipentanoylhydroxysuccinimide cross-linker." [PMID:19551991]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.605. XLMOD:02249 Sulfo-SBP

Table 607. Term [XLMOD:02249]

id

XLMOD:02249

name

Sulfo-SBP

def

"4-(N-Sulfosuccinimidylcarboxy)benzophenone." [CAS:91990-88-4, PMID:28430416]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

specificities: "(K,S,T,Y,Protein N-term)" xsd:string

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

relationship

is_activatable XLMOD:00149 photoactivatable ! photoactivatable

2.606. XLMOD:02250 CBSS

Table 608. Term [XLMOD:02250]

id

XLMOD:02250

name

CBSS

def

"Carboxybenzophenonesulfosuccinimide." [PMID:31045356]

property_value

reactionSites: "2" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00119 benzophenone ! benzophenone

2.607. XLMOD:02251 MC4

Table 609. Term [XLMOD:02251]

id

XLMOD:02251

name

MC4

def

"1,4-bis(4-((2,5-dioxopyrrolidin-1-yl)oxy)-4-oxobutyl)-1,4-diazabicyclo[2.2.2]octane-1,4-diium." [PMID:31045356, PMID:29537042]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.608. XLMOD:02252 PAC4

Table 610. Term [XLMOD:02252]

id

XLMOD:02252

name

PAC4

def

"PAC4 cross-linker." [PMID:29537042]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "13.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.609. XLMOD:02253 cliXLink

Table 611. Term [XLMOD:02253]

id

XLMOD:02253

name

cliXLink

def

"cliXLink cross-linker." [PMID:31593346]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "9.2" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00053 alkyne ! alkyne

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.610. XLMOD:02254 ARGO1

Table 612. Term [XLMOD:02254]

id

XLMOD:02254

name

ARGO1

def

"R-R aromatic glyoxal cross-linker 1." [PMID:31477730]

property_value

hydrophilicPEGchain: "1" xsd:nonNegativeInteger

property_value

monoIsotopicMass: "326.079" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "29.4" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00142 phenylglyoxal ! phenylglyoxal

2.611. XLMOD:02255 ARGO2

Table 613. Term [XLMOD:02255]

id

XLMOD:02255

name

ARGO2

def

"R-R aromatic glyoxal cross-linker 2." [PMID:31477730]

property_value

hydrophilicPEGchain: "2" xsd:nonNegativeInteger

property_value

monoIsotopicMass: "370.105" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "33.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00142 phenylglyoxal ! phenylglyoxal

2.612. XLMOD:02256 ARGO3

Table 614. Term [XLMOD:02256]

id

XLMOD:02256

name

ARGO3

def

"R-R aromatic glyoxal cross-linker 3." [PMID:31477730]

property_value

hydrophilicPEGchain: "3" xsd:nonNegativeInteger

property_value

monoIsotopicMass: "414.131" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "37.7" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00142 phenylglyoxal ! phenylglyoxal

2.613. XLMOD:02257 KARGO

Table 615. Term [XLMOD:02257]

id

XLMOD:02257

name

KARGO

def

"K-R aromatic glyoxal cross-linker." [PMID:31477730]

property_value

monoIsotopicMass: "352.095" xsd:double

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "54.1" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00142 phenylglyoxal ! phenylglyoxal

relationship

has_reactive_group XLMOD:00171 Ortho-phthalaldehyde ! Ortho-phthalaldehyde

2.614. XLMOD:02258 PhoX

Table 616. Term [XLMOD:02258]

id

XLMOD:02258

name

PhoX

def

"PhoX cross-linker." [PMID:31477730]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

spacerLength: "5.0-20.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00173 phosphonic acid ! phosphonic acid

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.615. XLMOD:03001 CBDPS

Table 617. Term [XLMOD:03001]

id

XLMOD:03001

name

CBDPS

def

"Cyanurbiotindipropionylsuccinimide." [PMID:20622150]

property_value

bridgeFormula: "C19 H23 N7 O4 S3" xsd:string

property_value

monoIsotopicMass: "509.09682" xsd:double

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "14.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_property XLMOD:00014 hydrophilic ! hydrophilic

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_cleavable XLMOD:00035 CID cleavable ! CID cleavable

2.616. XLMOD:03002 Sulfo-SBED

Table 618. Term [XLMOD:03002]

id

XLMOD:03002

name

Sulfo-SBED

def

"Sulfo-SBED cross-linker." [PubChem_Compound:101089650, ChemicalBookNo:CB2771737, PMID:15144972, PMID:16246579, PMID:15144972]

synonym

"Sulfo-N-hydroxysuccinimidyl-2-(6-[biotinamido]-2-(p-azido benzamido)-hexanoamido) ethyl-1,3'-dithioproprionate" EXACT []

property_value

monoIsotopicMass: "634.207" xsd:double

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "9.1" xsd:float

property_value

spacerLength: "13.7" xsd:float

property_value

spacerLength: "19.1" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00102 Sulfo NHS ester ! Sulfo NHS ester

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.617. XLMOD:03003 Mts-Atf-Biotin

Table 619. Term [XLMOD:03003]

id

XLMOD:03003

name

Mts-Atf-Biotin

def

"2-[N2-(4-Azido-2,3,5,6-tetrafluorobenzoyl)-N6-(6-biotinamidocaproyl)-L-lysinyl]ethylmethanethiosulfate." [CAS:1356383-18-0, PubChem_Compound:57370043, ChemSpiderID:48058836, ChemicalBookNo:CB4994943]

synonym

"tetrafluorobenzoyl-biotinamidocaproyl-methanethiosulfonate" EXACT []

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "11.1" xsd:float

property_value

spacerLength: "29.3" xsd:float

property_value

spacerLength: "30.7" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00118 tetrafluorophenyl azide ! tetrafluorophenyl azide

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.618. XLMOD:03004 Mts-Atf-LC-Biotin

Table 620. Term [XLMOD:03004]

id

XLMOD:03004

name

Mts-Atf-LC-Biotin

def

"2-{N2-[N6-(4-Azido-2,3,5,6-tetrafluorobenzoyl)-N6-(6-biotinamidocaproyl)-L-lysinyl]}ethylmethanethiosulfate." [PSI:XL]

synonym

"Mts-Atf-Long Chain-Biotin" EXACT []

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "11.1" xsd:float

property_value

spacerLength: "29.3" xsd:float

property_value

spacerLength: "30.7" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00118 tetrafluorophenyl azide ! tetrafluorophenyl azide

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

2.619. XLMOD:03005 TSAT

Table 621. Term [XLMOD:03005]

id

XLMOD:03005

name

TSAT

def

"Tris-succinimidyl aminotriacetate." [CAS:401514-72-5, PubChem_Compound:4150925, MDL:MFCD02258953, ChemSpiderID:3363127, ChemicalBookNo:CB8454500]

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "4.2" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.620. XLMOD:03006 SBED

Table 622. Term [XLMOD:03006]

id

XLMOD:03006

name

SBED

def

"SBED cross-linker." [PSI:XL]

synonym

"N-hydroxysuccinimidyl-2-(6-[biotinamido]-2-(p-azido benzamido)-hexanoamido) ethyl-1,3'-dithioproprionate" EXACT []

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "9.1" xsd:float

property_value

spacerLength: "13.7" xsd:float

property_value

spacerLength: "19.1" xsd:float

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00126 phenyl azide ! phenyl azide

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.621. XLMOD:03007 TMEA

Table 623. Term [XLMOD:03007]

id

XLMOD:03007

name

TMEA

def

"Tris-(2-maleimidoethyl)amine." [CAS:139112-38-2, PubChem_Compound:9977418, MDL:MFCD01868689, ChemSpiderID:8153010, ChemicalBookNo:CB8193391]

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "10.3" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.622. XLMOD:03008 TRICEPS

Table 624. Term [XLMOD:03008]

id

XLMOD:03008

name

TRICEPS

def

"TRICEPS cross-linker." [PubChem_Compound:72663594, PMID:23051814]

property_value

reactionSites: "3" xsd:nonNegativeInteger

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00143 hydrazone ! hydrazone

relationship

is_cleavable XLMOD:00024 periodate cleavable ! periodate cleavable

2.623. XLMOD:03009 NNP9

Table 625. Term [XLMOD:03009]

id

XLMOD:03009

name

NNP9

def

"NNP9 cross-linker." [PMID:25522193]

property_value

bridgeFormula: "C7 D10 H2 N4" xsd:string

property_value

monoIsotopicMass: "314.1127" xsd:double

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "10.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.624. XLMOD:03010 TATA

Table 626. Term [XLMOD:03010]

id

XLMOD:03010

name

TATA

def

"2,4,6-triazido-1,3,5-triazine." [CAS:5637-83-2, PubChem_Compound:21857, ChemSpiderID:20543, ChemicalBookNo:CB82442831, PMID:26931439]

synonym

"Cyanuric triazide" EXACT []

property_value

monoIsotopicMass: "200.05" xsd:double

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "5.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.625. XLMOD:03011 TATA-13C6

Table 627. Term [XLMOD:03011]

id

XLMOD:03011

name

TATA-13C6

def

"13C labelled 2,4,6-triazido-1,3,5-triazine." [PMID:26931439]

property_value

doubletDeltaMass: "6.02016" xsd:double

property_value

monoIsotopicMass: "206.07016" xsd:double

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "5.0" xsd:float

is_a

XLMOD:00005 homofunctional cross-linker ! homofunctional cross-linker

relationship

has_reactive_group XLMOD:00055 azide ! azide

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

2.626. XLMOD:03012 MRN

Table 628. Term [XLMOD:03012]

id

XLMOD:03012

name

MRN

def

"MRN cross-linker." [PMID:18303833]

property_value

reactionSites: "3" xsd:nonNegativeInteger

property_value

spacerLength: "6.4" xsd:float

property_value

spacerLength: "11.4" xsd:float

property_value

spacerLength: "40.0" xsd:float

is_a

XLMOD:00006 heterofunctional cross-linker ! heterofunctional cross-linker

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

2.627. XLMOD:03013 Mts-Atf-Biotin-LC

Table 629. Term [XLMOD:03013]

id

XLMOD:03013

name

Mts-Atf-Biotin-LC

def

"Long chain Mts-Atf-Biotin." [PSI:XL]

property_value

reactionSites: "3" xsd:nonNegativeInteger

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00118 tetrafluorophenyl azide ! tetrafluorophenyl azide

relationship

has_reactive_group XLMOD:00121 methanethiosulfonate ! methanethiosulfonate

relationship

is_cleavable XLMOD:00023 cleavable S-S bond ! cleavable S-S bond

2.628. XLMOD:03014 DADPS linker

Table 630. Term [XLMOD:03014]

id

XLMOD:03014

name

DADPS linker

def

"Linker containing a dialkoxydiphenylsilane group." [PMID:31430117]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

specificities: "(C,U)" xsd:string

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

is_a

XLMOD:00099 formic acid cleavable ! formic acid cleavable

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.629. XLMOD:03015 AZO linker

Table 631. Term [XLMOD:03015]

id

XLMOD:03015

name

AZO linker

def

"Linker containing a azobenzene group." [PMID:31430117]

property_value

reactionSites: "2" xsd:nonNegativeInteger

property_value

specificities: "(C,U)" xsd:string

is_a

XLMOD:00003 label transfer reagent ! label transfer reagent

is_a

XLMOD:00169 sodium dithionite cleavable ! sodium dithionite cleavable

relationship

has_handle XLMOD:00051 biotin ! biotin

relationship

has_reactive_group XLMOD:00055 azide ! azide

2.630. XLMOD:06000 derivatization entity

Table 632. Term [XLMOD:06000]

id

XLMOD:06000

name

derivatization entity

def

"Entity relevant to the domain of derivatization in chromatography." [PSI:XL]

relationship

part_of XLMOD:00000 Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary ! Proteomics Standards Initiative cross-linking and derivatization controlled vocabulary

2.631. XLMOD:06001 GCMS derivatization reagent

Table 633. Term [XLMOD:06001]

id

XLMOD:06001

name

GCMS derivatization reagent

def

"Chemical reagent, which transforms a polar group in a molecule into a non-polar group in order to make the molecule volatile and analyzable by GC-MS." [PSI:XL]

is_a

XLMOD:06000 derivatization entity ! derivatization entity

2.632. XLMOD:06002 alkylation reagent

Table 634. Term [XLMOD:06002]

id

XLMOD:06002

name

alkylation reagent

def

"Derivatization reagent replacing an active hydrogen by an aliphatic or aliphatic-aromatic group." [PSI:XL]

is_a

XLMOD:06001 GCMS derivatization reagent ! GCMS derivatization reagent

2.633. XLMOD:06003 silylation reagent

Table 635. Term [XLMOD:06003]

id

XLMOD:06003

name

silylation reagent

def

"Silylation reagent replacing an active hydrogen by a silyl group." [PSI:XL]

is_a

XLMOD:06001 GCMS derivatization reagent ! GCMS derivatization reagent

2.634. XLMOD:06004 acylation reagent

Table 636. Term [XLMOD:06004]

id

XLMOD:06004

name

acylation reagent

def

"Acylation reagent replacing an active hydrogen by a acyl (R-C=O-) group." [PSI:XL]

is_a

XLMOD:06001 GCMS derivatization reagent ! GCMS derivatization reagent

2.635. XLMOD:06005 fluorinated anhydride reagent

Table 637. Term [XLMOD:06005]

id

XLMOD:06005

name

fluorinated anhydride reagent

def

"Fluorinated anhydride derivatization reagent." [PSI:XL]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.636. XLMOD:06006 fluoracylimidazole reagent

Table 638. Term [XLMOD:06006]

id

XLMOD:06006

name

fluoracylimidazole reagent

def

"Fluoracylimidazole derivatization reagent." [PSI:XL]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.637. XLMOD:06008 halomethylsilyl reagent

Table 639. Term [XLMOD:06008]

id

XLMOD:06008

name

halomethylsilyl reagent

def

"Halogenation reagent which can produce both silylated and halogenated derivatives." [PSI:XL]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.638. XLMOD:06009 chiral derivatization reagent

Table 640. Term [XLMOD:06009]

id

XLMOD:06009

name

chiral derivatization reagent

def

"Chiral derivatization reagent with an enatiomerically pure chiral derivatizing agent to form two diastereomeric derivatives that can be separated by gas chromatography." [PSI:XL]

is_a

XLMOD:06001 GCMS derivatization reagent ! GCMS derivatization reagent

2.639. XLMOD:06010 LCMS derivatization reagent

Table 641. Term [XLMOD:06010]

id

XLMOD:06010

name

LCMS derivatization reagent

def

"Chemical reagent, which transforms an analyte so that its stability, separation, extraction, ionization efficiency and MS2 detectability are improved in LC-MS analysis." [PSI:XL]

is_a

XLMOD:06000 derivatization entity ! derivatization entity

2.640. XLMOD:06011 dialkylacetal

Table 642. Term [XLMOD:06011]

id

XLMOD:06011

name

dialkylacetal

def

"Dialkylacetal reagent." [PSI:XL]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.641. XLMOD:06012 diazoalkal

Table 643. Term [XLMOD:06012]

id

XLMOD:06012

name

diazoalkal

def

"Diazoalkal reagent." [PSI:XL]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.642. XLMOD:06013 TMS reagent

Table 644. Term [XLMOD:06013]

id

XLMOD:06013

name

TMS reagent

def

"Trimethylsilyl (TMS) reagent replacing an active hydrogen by a silyl group." [PSI:XL]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.643. XLMOD:06014 DMS reagent

Table 645. Term [XLMOD:06014]

id

XLMOD:06014

name

DMS reagent

def

"Dimethylsilyl (DMS) reagent replacing an active hydrogen by a silyl group." [PSI:XL]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.644. XLMOD:06015 TFA reagent

Table 646. Term [XLMOD:06015]

id

XLMOD:06015

name

TFA reagent

def

"Trifluoroacetyl (TFA) reagent replacing an active hydrogen by a silyl group." [PSI:XL]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.645. XLMOD:06016 boron trifluoride reagent

Table 647. Term [XLMOD:06016]

id

XLMOD:06016

name

boron trifluoride reagent

def

"Boron trifluoride reagent." [PSI:XL]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.646. XLMOD:06017 N,N-Dimethylformamidedialkyl acetal

Table 648. Term [XLMOD:06017]

id

XLMOD:06017

name

N,N-Dimethylformamidedialkyl acetal

def

"N,N-Dimethylformamidedialkyl acetal." [PSI:XL]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.647. XLMOD:06018 chloroformate reagent

Table 649. Term [XLMOD:06018]

id

XLMOD:06018

name

chloroformate reagent

def

"Chloroformate reagent." [PSI:XL]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00163 chloroformate reactive group ! chloroformate reactive group

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.648. XLMOD:06019 trialkyloxonium reagent

Table 650. Term [XLMOD:06019]

id

XLMOD:06019

name

trialkyloxonium reagent

def

"Trialkyloxonium reagent." [PSI:XL]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.649. XLMOD:06020 arylation reagent

Table 651. Term [XLMOD:06020]

id

XLMOD:06020

name

arylation reagent

def

"Derivatization reagent replacing an active hydrogen by an aliphatic-aromatic group, e.g. a -phenyl, -tolyl, -xylyl, -naphthy, -benzyl group." [PSI:XL]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.650. XLMOD:06100 chromophore

Table 652. Term [XLMOD:06100]

id

XLMOD:06100

name

chromophore

def

"A chromophore group attached to a derivatization reagent for enhanced UB- or VIS-detectability." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06000 derivatization entity ! derivatization entity

2.651. XLMOD:06101 fluorophore

Table 653. Term [XLMOD:06101]

id

XLMOD:06101

name

fluorophore

def

"A fluorophore group attached to a derivatization reagent for enhanced fluorescence or chemiluminescence detectability." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06000 derivatization entity ! derivatization entity

2.652. XLMOD:06102 electrophore

Table 654. Term [XLMOD:06102]

id

XLMOD:06102

name

electrophore

def

"An electrophore group attached to a derivatization reagent for enhanced electrochemical detectability." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06000 derivatization entity ! derivatization entity

2.653. XLMOD:06103 4-nitrophenyl

Table 655. Term [XLMOD:06103]

id

XLMOD:06103

name

4-nitrophenyl

def

"4-Nitrophenyl fluorophore." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06101 fluorophore ! fluorophore

property_value

maxAbsorption: "265 nm" xsd:string

2.654. XLMOD:06104 2,4-dinitrophenyl

Table 656. Term [XLMOD:06104]

id

XLMOD:06104

name

2,4-dinitrophenyl

def

"2,4-Dinitrophenyl fluorophore." [PSI:XL]

is_a

XLMOD:06101 fluorophore ! fluorophore

2.655. XLMOD:06105 3,5-dinitrobenzyl

Table 657. Term [XLMOD:06105]

id

XLMOD:06105

name

3,5-dinitrobenzyl

def

"3,5-Dinitrobenzyl fluorophore." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06101 fluorophore ! fluorophore

2.656. XLMOD:06106 4-chlorobenzoate

Table 658. Term [XLMOD:06106]

id

XLMOD:06106

name

4-chlorobenzoate

def

"4-Chlorobenzoatel fluorophore." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06101 fluorophore ! fluorophore

property_value

maxAbsorption: "236 nm" xsd:string

2.657. XLMOD:06107 4-nitrobenzoate

Table 659. Term [XLMOD:06107]

id

XLMOD:06107

name

4-nitrobenzoate

def

"4-Nitrobenzoatel fluorophore." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06101 fluorophore ! fluorophore

property_value

maxAbsorption: "254 nm" xsd:string

2.658. XLMOD:06108 toluoyl

Table 660. Term [XLMOD:06108]

id

XLMOD:06108

name

toluoyl

def

"Toluoyll fluorophore." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06101 fluorophore ! fluorophore

property_value

maxAbsorption: "236 nm" xsd:string

2.659. XLMOD:06109 anisyl

Table 661. Term [XLMOD:06109]

id

XLMOD:06109

name

anisyl

def

"Anisyl fluorophore." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06101 fluorophore ! fluorophore

property_value

maxAbsorption: "262 nm" xsd:string

2.660. XLMOD:06110 phenacyl

Table 662. Term [XLMOD:06110]

id

XLMOD:06110

name

phenacyl

def

"Phenacyl fluorophore." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06101 fluorophore ! fluorophore

property_value

maxAbsorption: "250 nm" xsd:string

2.661. XLMOD:06111 4-bromophenacyl

Table 663. Term [XLMOD:06111]

id

XLMOD:06111

name

4-bromophenacyl

def

"4-Bromophenacyl fluorophore." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06101 fluorophore ! fluorophore

property_value

maxAbsorption: "260 nm" xsd:string

2.662. XLMOD:06112 2-naphthacyl

Table 664. Term [XLMOD:06112]

id

XLMOD:06112

name

2-naphthacyl

def

"2-Naphthacyl fluorophore." [DOI:10.1016/B978-0-12-415806-1.00002-4]

is_a

XLMOD:06101 fluorophore ! fluorophore

property_value

maxAbsorption: "248 nm" xsd:string

2.663. XLMOD:06500 secondary amine reactive

Table 665. Term [XLMOD:06500]

id

XLMOD:06500

name

secondary amine reactive

def

"Indicates that a reactive group is reactive with secondary amino (=NH) groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.664. XLMOD:06501 active hydrogen reactive

Table 666. Term [XLMOD:06501]

id

XLMOD:06501

name

active hydrogen reactive

def

"Indicates that a derivatization reagent is reactive with active hydrogens like e.g. from -SH, -OH, -NH, -COOH groups." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.665. XLMOD:06502 amide reactive

Table 667. Term [XLMOD:06502]

id

XLMOD:06502

name

amide reactive

def

"Indicates that a derivatization reagent is reactive with amides." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.666. XLMOD:06503 amino acid reactive

Table 668. Term [XLMOD:06503]

id

XLMOD:06503

name

amino acid reactive

def

"Indicates that a derivatization reagent is reactive with amino acids." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.667. XLMOD:06504 nitrosamine reactive

Table 669. Term [XLMOD:06504]

id

XLMOD:06504

name

nitrosamine reactive

def

"Indicates that a derivatization reagent is reactive with nitrosamines." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.668. XLMOD:06505 sulfonamide reactive

Table 670. Term [XLMOD:06505]

id

XLMOD:06505

name

sulfonamide reactive

def

"Indicates that a derivatization reagent is reactive with sulfonamides." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.669. XLMOD:06506 carbohydrate reactive

Table 671. Term [XLMOD:06506]

id

XLMOD:06506

name

carbohydrate reactive

def

"Indicates that a derivatization reagent is reactive with carbohydrates and sugars." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.670. XLMOD:06507 catecholamine reactive

Table 672. Term [XLMOD:06507]

id

XLMOD:06507

name

catecholamine reactive

def

"Indicates that a derivatization reagent is reactive with catecholamines." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.671. XLMOD:06508 sulfide reactive

Table 673. Term [XLMOD:06508]

id

XLMOD:06508

name

sulfide reactive

def

"Indicates that a derivatization reagent is reactive with sulfides." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.672. XLMOD:06509 phenol reactive

Table 674. Term [XLMOD:06509]

id

XLMOD:06509

name

phenol reactive

def

"Indicates that a derivatization reagent is reactive with phenols." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.673. XLMOD:06510 ketone reactive

Table 675. Term [XLMOD:06510]

id

XLMOD:06510

name

ketone reactive

def

"Indicates that a derivatization reagent is reactive with ketones." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.674. XLMOD:06511 biphosphonate drug reactive

Table 676. Term [XLMOD:06511]

id

XLMOD:06511

name

biphosphonate drug reactive

def

"Indicates that a derivatization reagent is reactive with biphosphonate drugs." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.675. XLMOD:06512 steroid reactive

Table 677. Term [XLMOD:06512]

id

XLMOD:06512

name

steroid reactive

def

"Indicates that a derivatization reagent is reactive with steroids." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.676. XLMOD:06513 thiol reactive

Table 678. Term [XLMOD:06513]

id

XLMOD:06513

name

thiol reactive

def

"Indicates that a derivatization reagent is reactive with thiols." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.677. XLMOD:06514 Vitamin D metabolite reactive

Table 679. Term [XLMOD:06514]

id

XLMOD:06514

name

Vitamin D metabolite reactive

def

"Indicates that a derivatization reagent is reactive with vitamin D metabolites." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.678. XLMOD:06515 nucleoside reactive

Table 680. Term [XLMOD:06515]

id

XLMOD:06515

name

nucleoside reactive

def

"Indicates that a derivatization reagent is reactive with nucleosides." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.679. XLMOD:06516 cholesterol reactive

Table 681. Term [XLMOD:06516]

id

XLMOD:06516

name

cholesterol reactive

def

"Indicates that a derivatization reagent is reactive with cholesterols." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.680. XLMOD:06517 histamine reactive

Table 682. Term [XLMOD:06517]

id

XLMOD:06517

name

histamine reactive

def

"Indicates that a derivatization reagent is reactive with histamines." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.681. XLMOD:06518 glycan reactive

Table 683. Term [XLMOD:06518]

id

XLMOD:06518

name

glycan reactive

def

"Indicates that a derivatization reagent is reactive with glycans." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.682. XLMOD:06519 alpha-keto acid reactive

Table 684. Term [XLMOD:06519]

id

XLMOD:06519

name

alpha-keto acid reactive

def

"Indicates that a derivatization reagent is reactive with alpha-keto-acids." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.683. XLMOD:06520 citric acid reactive

Table 685. Term [XLMOD:06520]

id

XLMOD:06520

name

citric acid reactive

def

"Indicates that a derivatization reagent is reactive with citric acid." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.684. XLMOD:06521 phophate reactive

Table 686. Term [XLMOD:06521]

id

XLMOD:06521

name

phophate reactive

def

"Indicates that a derivatization reagent is reactive with phosphate." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.685. XLMOD:06522 perfluorinated carboxylic acid reactive

Table 687. Term [XLMOD:06522]

id

XLMOD:06522

name

perfluorinated carboxylic acid reactive

def

"Indicates that a derivatization reagent is reactive with perfluorinated carboxylic acids." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.686. XLMOD:06523 sialic acid reactive

Table 688. Term [XLMOD:06523]

id

XLMOD:06523

name

sialic acid reactive

def

"Indicates that a derivatization reagent is reactive with sialic acid." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.687. XLMOD:06524 bile acid reactive

Table 689. Term [XLMOD:06524]

id

XLMOD:06524

name

bile acid reactive

def

"Indicates that a derivatization reagent is reactive with bile acids." [PSI:XL]

is_a

XLMOD:00027 chemically reactive ! chemically reactive

2.688. XLMOD:07000 dimethylformamide

Table 690. Term [XLMOD:07000]

id

XLMOD:07000

name

dimethylformamide

def

"Dimethylformamide." [CAS:68-12-2, PubChem_Compound:6228, MDL:MFCD00003284, ChemSpiderID:5993, ChemicalBookNo:CB2854115, DOI:10.5772/33098]

synonym

"DMF" EXACT []

is_a

XLMOD:06011 dialkylacetal ! dialkylacetal

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06502 amide reactive ! amide reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06504 nitrosamine reactive ! nitrosamine reactive

2.689. XLMOD:07001 diazomethane

Table 691. Term [XLMOD:07001]

id

XLMOD:07001

name

diazomethane

def

"Diazomethane." [CAS:334-88-3, PubChem_Compound:9550, ChemSpiderID:9176, ChemicalBookNo:CB4852342, DOI:10.5772/33098]

is_a

XLMOD:06012 diazoalkal ! diazoalkal

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06511 biphosphonate drug reactive ! biphosphonate drug reactive

2.690. XLMOD:07002 pentafluorobenzyl bromide

Table 692. Term [XLMOD:07002]

id

XLMOD:07002

name

pentafluorobenzyl bromide

def

"Pentafluorobenzyl bromide." [CAS:1765-40-8, PubChem_Compound:74484, MDL:MFCD00000299, ChemSpiderID:67069, ChemicalBookNo:CB9238273, DOI:10.5772/33098, PMID:22191594]

synonym

"PFBBr" EXACT []

is_a

XLMOD:06020 arylation reagent ! arylation reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00168 benzyl bromide reactive group ! benzyl bromide reactive group

relationship

is_reactive_with XLMOD:06504 nitrosamine reactive ! nitrosamine reactive

relationship

is_reactive_with XLMOD:06505 sulfonamide reactive ! sulfonamide reactive

2.691. XLMOD:07003 pentafluorobenzylhydroxylaminehydrochloride

Table 693. Term [XLMOD:07003]

id

XLMOD:07003

name

pentafluorobenzylhydroxylaminehydrochloride

def

"Pentafluorobenzylhydroxylaminehydrochloride." [CAS:57981-02-9, PubChem_Compound:129670358, Beilstein:4031190, MDL:MFCD00012953, ChemicalBookNo:CB8307815, DOI:10.5772/33098]

synonym

"PFBHA" EXACT []

is_a

XLMOD:06020 arylation reagent ! arylation reagent

relationship

is_reactive_with XLMOD:00063 carbonyl reactive ! carbonyl reactive

2.692. XLMOD:07004 benzylbromide

Table 694. Term [XLMOD:07004]

id

XLMOD:07004

name

benzylbromide

def

"Benzylbromide." [CAS:100-39-0, PubChem_Compound:7498, ChemSpiderID:13851576, ChemicalBookNo:CB6761035, DOI:10.5772/33098]

synonym

"BnBr" EXACT []

is_a

XLMOD:06020 arylation reagent ! arylation reagent

relationship

has_reactive_group XLMOD:00168 benzyl bromide reactive group ! benzyl bromide reactive group

2.693. XLMOD:07005 tetrabutylammoniumhydroxide

Table 695. Term [XLMOD:07005]

id

XLMOD:07005

name

tetrabutylammoniumhydroxide

def

"Tetrabutylammoniumhydroxide." [CAS:2052-49-5, PubChem_Compound:2723671, MDL:MFCD00009425, ChemSpiderID:13851576, ChemicalBookNo:CB6371870, DOI:10.5772/33098]

synonym

"TBH" EXACT []

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.694. XLMOD:07006 boron trifluoride

Table 696. Term [XLMOD:07006]

id

XLMOD:07006

name

boron trifluoride

def

"Boron trifluoride derivatization reagent." [CAS:7637-07-2, MDL:MFCD00011316, ChemSpiderID:6116, ChemicalBookNo:CB3238105, DOI:10.5772/33098]

synonym

"BF3" EXACT []

is_a

XLMOD:06016 boron trifluoride reagent ! boron trifluoride reagent

2.695. XLMOD:07007 bis(trimethylsilyl)acetamide

Table 697. Term [XLMOD:07007]

id

XLMOD:07007

name

bis(trimethylsilyl)acetamide

def

"Bis(trimethylsilyl)acetamide." [CAS:10416-59-8, PubChem_Compound:6913588, Beilstein:1306669, MDL:MFCD00008270, ChemSpiderID:4523073, ChemicalBookNo:CB7366985, DOI:10.5772/33098]

synonym

"BSA" EXACT []

synonym

"N,O-Bis(trimethylsilyl)acetamide" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06502 amide reactive ! amide reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.696. XLMOD:07008 bis(trimethylsilyl)trifluoroacetamide

Table 698. Term [XLMOD:07008]

id

XLMOD:07008

name

bis(trimethylsilyl)trifluoroacetamide

def

"Bis(trimethylsilyl)trifluoroacetamide." [CAS:25561-30-2, PubChem_Compound:94358, ChemSpiderID:58770, ChemicalBookNo:CB5464744, DOI:10.5772/33098]

synonym

"BSTFA" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06504 nitrosamine reactive ! nitrosamine reactive

2.697. XLMOD:07009 N-methyl-trimethylsilyltrifluoroacetamide

Table 699. Term [XLMOD:07009]

id

XLMOD:07009

name

N-methyl-trimethylsilyltrifluoroacetamide

def

"N-methyl-trimethylsilyltrifluoroacetamide." [CAS:24589-78-4, PubChem_Compound:32510, Beilstein:1941550, MDL:MFCD00000411, ChemSpiderID:30134, ChemicalBookNo:CB0161574, DOI:10.5772/33098, PMID:26478271]

synonym

"MSTFA" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.698. XLMOD:07010 hexamethyldisilazane

Table 700. Term [XLMOD:07010]

id

XLMOD:07010

name

hexamethyldisilazane

def

"Hexamethyldisilazane." [CAS:999-97-3, PubChem_Compound:13838, ChemSpiderID:13238, ChemicalBookNo:CB9105784, DOI:10.5772/33098]

synonym

"HMDS" EXACT []

is_a

XLMOD:06003 silylation reagent ! silylation reagent

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06506 carbohydrate reactive ! carbohydrate reactive

2.699. XLMOD:07011 trimethylchlorosilane

Table 701. Term [XLMOD:07011]

id

XLMOD:07011

name

trimethylchlorosilane

def

"Trimethylchlorosilane." [CAS:75-77-4, PubChem_Compound:6397, Beilstein:1209232, MDL:MFCD00000502, ChemSpiderID:6157, ChemicalBookNo:CB4375627, PMID:19525080, DOI:10.5772/33098]

synonym

"TMCS" EXACT []

synonym

"CMTS" EXACT []

synonym

"Chlorotrimethylsilane" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06506 carbohydrate reactive ! carbohydrate reactive

2.700. XLMOD:07012 trimethylsilylimidazole

Table 702. Term [XLMOD:07012]

id

XLMOD:07012

name

trimethylsilylimidazole

def

"Trimethylsilylimidazole." [CAS:18156-74-6, PubChem_Compound:28925, Beilstein:606148, MDL:MFCD00005280, ChemSpiderID:26905, ChemicalBookNo:CB5483743, DOI:10.5772/33098, PMID:26478271]

synonym

"TMSI" EXACT []

synonym

"TMSIM" EXACT []

synonym

"1-(Trimethylsilyl)imidazole" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06506 carbohydrate reactive ! carbohydrate reactive

relationship

is_reactive_with XLMOD:06507 catecholamine reactive ! catecholamine reactive

relationship

is_reactive_with XLMOD:06508 sulfide reactive ! sulfide reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.701. XLMOD:07013 trimethylsilyldiethylamine

Table 703. Term [XLMOD:07013]

id

XLMOD:07013

name

trimethylsilyldiethylamine

def

"Trimethylsilyldiethylamine." [CAS:996-50-9, PubChem_Compound:70454, ChemSpiderID:63633, ChemicalBookNo:CB3771284, DOI:10.5772/33098]

synonym

"TMS-DEA" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.702. XLMOD:07014 N-methyl-N-t-butyldimethylsilyltrifluoroacetamide

Table 704. Term [XLMOD:07014]

id

XLMOD:07014

name

N-methyl-N-t-butyldimethylsilyltrifluoroacetamide

def

"N-methyl-N-t-butyldimethylsilyltrifluoroacetamide." [CAS:77377-52-7, PubChem_Compound:2724275, Beilstein:3606546, MDL:MFCD00009671, ChemSpiderID:2006425, ChemicalBookNo:CB7707814, DOI:10.5772/33098, PMID:26478271]

synonym

"MTBSTFA" EXACT []

synonym

"1,3-Dimethyl-1,1,3,3-tetraphenyldisilazane" EXACT []

is_a

XLMOD:06014 DMS reagent ! DMS reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.703. XLMOD:07015 trifluoroacetoic anhydride

Table 705. Term [XLMOD:07015]

id

XLMOD:07015

name

trifluoroacetoic anhydride

def

"Trifluoroacetoic anhydride." [CAS:407-25-0, PubChem_Compound:9845, DOI:10.5772/33098]

synonym

"TFAA" EXACT []

is_a

XLMOD:06005 fluorinated anhydride reagent ! fluorinated anhydride reagent

is_a

XLMOD:06015 TFA reagent ! TFA reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

2.704. XLMOD:07016 pentafluoropropionic anhydride

Table 706. Term [XLMOD:07016]

id

XLMOD:07016

name

pentafluoropropionic anhydride

def

"Pentafluoropropionic anhydride." [CAS:356-42-3, PubChem_Compound:67742, Beilstein:1806446, MDL:MFCD00000429, ChemicalBookNo:CB2749284, DOI:10.5772/33098]

synonym

"PFPA" EXACT []

is_a

XLMOD:06005 fluorinated anhydride reagent ! fluorinated anhydride reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06504 nitrosamine reactive ! nitrosamine reactive

relationship

is_reactive_with XLMOD:06507 catecholamine reactive ! catecholamine reactive

2.705. XLMOD:07017 heptafluorobutyric anhydride

Table 707. Term [XLMOD:07017]

id

XLMOD:07017

name

heptafluorobutyric anhydride

def

"Heptafluorobutyric anhydride." [CAS:336-59-4, PubChem_Compound:67643, Beilstein:856036, MDL:MFCD00000432, ChemSpiderID:60962, ChemicalBookNo:CB5217287, DOI:10.5772/33098, PMID:26478271]

synonym

"HFBA" EXACT []

is_a

XLMOD:06005 fluorinated anhydride reagent ! fluorinated anhydride reagent

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06504 nitrosamine reactive ! nitrosamine reactive

relationship

is_reactive_with XLMOD:06505 sulfonamide reactive ! sulfonamide reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.706. XLMOD:07018 trifluoroacetylimidazole

Table 708. Term [XLMOD:07018]

id

XLMOD:07018

name

trifluoroacetylimidazole

def

"Trifluoroacetylimidazole." [CAS:1546-79-8, PubChem_Compound:73767, Beilstein:608904, MDL:MFCD00014501, ChemSpiderID:66407, ChemicalBookNo:CB7308204, DOI:10.5772/33098]

synonym

"TFAI" EXACT []

is_a

XLMOD:06005 fluorinated anhydride reagent ! fluoracylimidazole reagent

is_a

XLMOD:06015 TFA reagent ! TFA reagent

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

2.707. XLMOD:07019 pentafluoropropanylimidazole

Table 709. Term [XLMOD:07019]

id

XLMOD:07019

name

pentafluoropropanylimidazole

def

"Pentafluoropropanylimidazole." [DOI:10.5772/33098]

synonym

"PFPI" EXACT []

is_a

XLMOD:06005 fluorinated anhydride reagent ! fluoracylimidazole reagent

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

2.708. XLMOD:07020 heptafluorobutyrylimidazole

Table 710. Term [XLMOD:07020]

id

XLMOD:07020

name

heptafluorobutyrylimidazole

def

"Heptafluorobutyrylimidazole." [CAS:32477-35-3, PubChem_Compound:94431, MDL:MFCD00014503, ChemSpiderID:85218, ChemicalBookNo:CB4100522, DOI:10.5772/33098]

synonym

"HFBI" EXACT []

is_a

XLMOD:06005 fluorinated anhydride reagent ! fluoracylimidazole reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06502 amide reactive ! amide reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06507 catecholamine reactive ! catecholamine reactive

2.709. XLMOD:07021 N-Methyl-bis(trifluoroacetamide)

Table 711. Term [XLMOD:07021]

id

XLMOD:07021

name

N-Methyl-bis(trifluoroacetamide)

def

"N-Methyl-bis(trifluoroacetamide)." [CAS:685-27-8, PubChem_Compound:69635, Beilstein:1878402, MDL:MFCD00000412, ChemSpiderID:62836, ChemicalBookNo:CB0220312, DOI:10.5772/33098]

synonym

"MBTFA" EXACT []

is_a

XLMOD:06015 TFA reagent ! TFA reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

2.710. XLMOD:07022 pentafluorobenzoyl chloride

Table 712. Term [XLMOD:07022]

id

XLMOD:07022

name

pentafluorobenzoyl chloride

def

"Pentafluorobenzoyl chloride." [CAS:2251-50-5, PubChem_Compound:75256, Beilstein:2054397, MDL:MFCD00000657, ChemSpiderID:67799, ChemicalBookNo:CB6191348, DOI:10.5772/33098]

synonym

"PFBC" EXACT []

is_a

XLMOD:06003 silylation reagent ! acylation reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00155 acyl chloride ! acyl chloride

2.711. XLMOD:07023 pentafluoropropanol

Table 713. Term [XLMOD:07023]

id

XLMOD:07023

name

pentafluoropropanol

def

"Pentafluoropropanol." [CAS:679-86-7, PubChem_Compound:168785, MDL:MFCD00153226, ChemSpiderID:9488, ChemicalBookNo:CB9689963, DOI:10.5772/33098]

synonym

"PFPOH" EXACT []

is_a

XLMOD:06003 silylation reagent ! acylation reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

2.712. XLMOD:07024 4-Carbethoxyhexafluorobutyrylchloride

Table 714. Term [XLMOD:07024]

id

XLMOD:07024

name

4-Carbethoxyhexafluorobutyrylchloride

def

"4-Carbethoxyhexafluorobutyrylchloride." [CAS:18381-53-8, PubChem_Compound:161251, ChemSpiderID:141651, ChemicalBookNo:CB2153034, DOI:10.5772/33098]

synonym

"4-CB" EXACT []

is_a

XLMOD:06003 silylation reagent ! acylation reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.713. XLMOD:07025 N-trifluoroacetyl-L-prolylchloride

Table 715. Term [XLMOD:07025]

id

XLMOD:07025

name

N-trifluoroacetyl-L-prolylchloride

def

"N-trifluoroacetyl-L-prolylchloride." [CAS:36724-68-2, PubChem_Compound:3082449, ChemicalBookNo:CB1411487, DOI:10.5772/33098]

synonym

"TPC" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.714. XLMOD:07026 (S)-(-)-N-(Trifluoroacetyl)-prolylchloride

Table 716. Term [XLMOD:07026]

id

XLMOD:07026

name

(S)-(-)-N-(Trifluoroacetyl)-prolylchloride

def

"(S)-(-)-N-(Trifluoroacetyl)-prolylchloride." [CAS:36724-68-2, PubChem_Compound:3082449, ChemicalBookNo:3082449, DOI:10.5772/33098]

synonym

"I-TPC" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.715. XLMOD:07027 (-)-alpha-Methoxy-alpha-trifluoromethylphenylacetic acid

Table 717. Term [XLMOD:07027]

id

XLMOD:07027

name

(-)-alpha-Methoxy-alpha-trifluoromethylphenylacetic acid

def

"(-)-alpha-Methoxy-alpha-trifluoromethylphenylacetic acid." [CAS:56135-03-6, PubChem_Compound:2723917, MDL:MFCD00066637, DOI:10.5772/33098]

synonym

"MTPA" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.716. XLMOD:07028 oximation reagent

Table 718. Term [XLMOD:07028]

id

XLMOD:07028

name

oximation reagent

def

"Oximation reagent replacing an aldehyde keto group with an O-methyloxime group." [PSI:XL]

is_a

XLMOD:06001 GCMS derivatization reagent ! GCMS derivatization reagent

2.717. XLMOD:07029 methoxylamine hydrochloride

Table 719. Term [XLMOD:07029]

id

XLMOD:07029

name

methoxylamine hydrochloride

def

"Methoxylamine hydrochloride." [CAS:593-56-6, PubChem_Compound:521874, MDL:MFCD00012951, Beilstein:3589723, ChemSpiderID:455236, ChemicalBookNo:CB3439014]

synonym

"O-Methylhydroxylamine hydrochloride" EXACT []

synonym

"Methoxyammonium chloride" EXACT []

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

is_a

XLMOD:07028 oximation reagent ! oximation reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06506 carbohydrate reactive ! carbohydrate reactive

2.718. XLMOD:07030 Trimethyliodosilane

Table 720. Term [XLMOD:07030]

id

XLMOD:07030

name

Trimethyliodosilane

def

"Trimethyliodosilane." [PMID:26478271, PMID:26478271]

synonym

"TMIS" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06013 TMS reagent ! TMS reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.719. XLMOD:07031 deuterium labelled N-methyl-trimethylsilyltrifluoroacetamide

Table 721. Term [XLMOD:07031]

id

XLMOD:07031

name

deuterium labelled N-methyl-trimethylsilyltrifluoroacetamide

def

"Deuterium labelled N-methyl-trimethylsilyltrifluoroacetamide." [CAS:945623-67-6, ChemicalBookNo:CB72545465, PMID:23628173]

synonym

"MSTFA-d9" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.720. XLMOD:07032 deuterium labelled N-methyl-N-t-butyldimethylsilyltrifluoroacetamide

Table 722. Term [XLMOD:07032]

id

XLMOD:07032

name

deuterium labelled N-methyl-N-t-butyldimethylsilyltrifluoroacetamide

def

"Deuterium labelled N-methyl-N-t-butyldimethylsilyltrifluoroacetamide." [PMID:23628173]

synonym

"MTBSTFA-d6" EXACT []

is_a

XLMOD:06014 DMS reagent ! DMS reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06501 active hydrogen reactive ! active hydrogen reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.721. XLMOD:07033 deuterium labelled methyl chloroformate

Table 723. Term [XLMOD:07033]

id

XLMOD:07033

name

deuterium labelled methyl chloroformate

def

"Deuterium labelled methyl chloroformate." [PMID:23628173]

synonym

"MCF-d3" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.722. XLMOD:07034 methyl chloroformate

Table 724. Term [XLMOD:07034]

id

XLMOD:07034

name

methyl chloroformate

def

"Methyl chloroformate." [CAS:79-22-1, PubChem_Compound:6586, ChemSpiderID:6337]

synonym

"MCF" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.723. XLMOD:07035 9-Fluorenylmethyl chloroformate

Table 725. Term [XLMOD:07035]

id

XLMOD:07035

name

9-Fluorenylmethyl chloroformate

def

"9-Fluorenylmethyl chloroformate." [CAS:28920-43-6, ChemSpiderID:31647, ChemicalBookNo:CB7234569]

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.724. XLMOD:07036 trichloroethyl chloroformate

Table 726. Term [XLMOD:07036]

id

XLMOD:07036

name

trichloroethyl chloroformate

def

"Trichloroethyl chloroformate." [CAS:17341-93-4, PubChem_Compound:87063, ChemSpiderID:78534, ChemicalBookNo:CB1372973]

synonym

"TCECF" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.725. XLMOD:07037 pentafluorobenzyl chloroformate

Table 727. Term [XLMOD:07037]

id

XLMOD:07037

name

pentafluorobenzyl chloroformate

def

"Pentafluorobenzyl chloroformate." [CAS:53526-74-2, PubChem_Compound:2775932, ChemSpiderID:2056259, ChemicalBookNo:CB8165220]

synonym

"PFBCF" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.726. XLMOD:07038 1-chloroethyl chloroformate

Table 728. Term [XLMOD:07038]

id

XLMOD:07038

name

1-chloroethyl chloroformate

def

"1-chloroethyl chloroformate." [CAS:50893-53-3, PubChem_Compound:521305, ChemSpiderID:454726, ChemicalBookNo:CB5320341]

synonym

"1CEF" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.727. XLMOD:07039 N-Acetylimidazole

Table 729. Term [XLMOD:07039]

id

XLMOD:07039

name

N-Acetylimidazole

def

"N-Acetylimidazole." [CAS:2466-76-4, PubChem_Compound:17174, ChemSpiderID:16257, ChemicalBookNo:CB9339608]

synonym

"AIM" EXACT []

is_a

XLMOD:06003 silylation reagent ! acylation reagent

2.728. XLMOD:07040 1,3-Bis(chloromethyl)-1,1,3,3-tetramethyldisilazane

Table 730. Term [XLMOD:07040]

id

XLMOD:07040

name

1,3-Bis(chloromethyl)-1,1,3,3-tetramethyldisilazane

def

"1,3-Bis(chloromethyl)-1,1,3,3-tetramethyldisilazane." [CAS:14579-91-0, PubChem_Compound:26740, ChemSpiderID:24914, ChemicalBookNo:CB1743876]

synonym

"CMTMS" EXACT []

is_a

XLMOD:06014 DMS reagent ! DMS reagent

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.729. XLMOD:07041 Dimethylchlorosilane

Table 731. Term [XLMOD:07041]

id

XLMOD:07041

name

Dimethylchlorosilane

def

"Dimethylchlorosilane." [CAS:1066-35-9, PubChem_Compound:6327132, ChemSpiderID:59496, ChemicalBookNo:CB3694606]

synonym

"DMCS" EXACT []

is_a

XLMOD:06014 DMS reagent ! DMS reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.730. XLMOD:07042 N-Trimethylsilylacetamide

Table 732. Term [XLMOD:07042]

id

XLMOD:07042

name

N-Trimethylsilylacetamide

def

"N-Trimethylsilylacetamide." [CAS:13435-12-6, PubChem_Compound:25989, ChemSpiderID:24208, ChemicalBookNo:CB7667530]

synonym

"TMSA" EXACT []

synonym

"N-(Trimethylsilyl)acetamide" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_reactive_with XLMOD:06506 carbohydrate reactive ! carbohydrate reactive

2.731. XLMOD:07043 N-(Trimethylsilyl)diethylamine

Table 733. Term [XLMOD:07043]

id

XLMOD:07043

name

N-(Trimethylsilyl)diethylamine

def

"N-(Trimethylsilyl)diethylamine." [CAS:996-50-9, PubChem_Compound:70454, ChemSpiderID:63633, ChemicalBookNo:CB3771284]

synonym

"TMSDEA" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.732. XLMOD:07044 trimethylphenylammonium hydroxide

Table 734. Term [XLMOD:07044]

id

XLMOD:07044

name

trimethylphenylammonium hydroxide

def

"Trimethylphenylammonium hydroxide." [CAS:1899-02-1, PubChem_Compound:15913, ChemSpiderID:15124, ChemicalBookNo:CB5316173]

synonym

"TMPAH" EXACT []

synonym

"MethElute reagent" EXACT []

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06502 amide reactive ! amide reactive

2.733. XLMOD:07045 N,N-Dimethylformamidedimethyl acetal

Table 735. Term [XLMOD:07045]

id

XLMOD:07045

name

N,N-Dimethylformamidedimethyl acetal

def

"N,N-Dimethylformamidedimethyl acetal." [CAS:4637-24-5, PubChem_Compound:78373, ChemSpiderID:70742, ChemicalBookNo:CB8178244]

synonym

"DMFDMA" EXACT []

synonym

"Methylate reagent" EXACT []

is_a

XLMOD:06017 N,N-Dimethylformamidedialkyl acetal ! N,N-Dimethylformamidedialkyl acetal

2.734. XLMOD:07046 dimethyldichlorosilane

Table 736. Term [XLMOD:07046]

id

XLMOD:07046

name

dimethyldichlorosilane

def

"Dimethyldichlorosilane." [CAS:75-78-5, PubChem_Compound:6398, ChemSpiderID:6158, ChemicalBookNo:CB8854243]

synonym

"DMDCS" EXACT []

is_a

XLMOD:06014 DMS reagent ! DMS reagent

2.735. XLMOD:07047 N-t-Butyldimethylsilylimidazole

Table 737. Term [XLMOD:07047]

id

XLMOD:07047

name

N-t-Butyldimethylsilylimidazole

def

"N-t-Butyldimethylsilylimidazole." [CAS:54925-64-3, PubChem_Compound:171385, ChemSpiderID:149827, ChemicalBookNo:CB1271225]

synonym

"TBDMSIM" EXACT []

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.736. XLMOD:07048 4-Trimethylsiloxy-3-penten-2-one

Table 738. Term [XLMOD:07048]

id

XLMOD:07048

name

4-Trimethylsiloxy-3-penten-2-one

def

"4-Trimethylsiloxy-3-penten-2-one." [CAS:13257-81-3, PubChem_Compound:6059369, ChemSpiderID:4518416, ChemicalBookNo:CB3457672]

is_a

XLMOD:06013 TMS reagent ! TMS reagent

2.737. XLMOD:07049 bromotrimethylsilane

Table 739. Term [XLMOD:07049]

id

XLMOD:07049

name

bromotrimethylsilane

def

"Bromotrimethylsilane." [CAS:2857-97-8, PubChem_Compound:76113, ChemSpiderID:68599, ChemicalBookNo:CB9749809]

is_a

XLMOD:06013 TMS reagent ! TMS reagent

2.738. XLMOD:07050 triisopropylsilyl chloride

Table 740. Term [XLMOD:07050]

id

XLMOD:07050

name

triisopropylsilyl chloride

def

"Triisopropylsilyl chloride." [CAS:13154-24-0, PubChem_Compound:139400, ChemSpiderID:122926, ChemicalBookNo:CB3405310]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.739. XLMOD:07051 triisopropylsilyl trifluoromethanesulfonate

Table 741. Term [XLMOD:07051]

id

XLMOD:07051

name

triisopropylsilyl trifluoromethanesulfonate

def

"Triisopropylsilyl trifluoromethanesulfonate." [CAS:80522-42-5, PubChem_Compound:2724529, ChemSpiderID:2006662, ChemicalBookNo:CB5189874]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.740. XLMOD:07052 triethylsilyl trifluoromethanesulfonate

Table 742. Term [XLMOD:07052]

id

XLMOD:07052

name

triethylsilyl trifluoromethanesulfonate

def

"Triethylsilyl trifluoromethanesulfonate." [CAS:79271-56-0, PubChem_Compound:2733308, ChemSpiderID:2015110, ChemicalBookNo:CB6298346]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.741. XLMOD:07053 chlorotriethylsilane

Table 743. Term [XLMOD:07053]

id

XLMOD:07053

name

chlorotriethylsilane

def

"Chlorotriethylsilane." [CAS:994-30-9, PubChem_Compound:13819, ChemSpiderID:13221, ChemicalBookNo:CB4746520]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.742. XLMOD:07054 chloro-dimethyl(pentafluorophenyl)silane

Table 744. Term [XLMOD:07054]

id

XLMOD:07054

name

chloro-dimethyl(pentafluorophenyl)silane

def

"Chloro-dimethyl(pentafluorophenyl)silane." [CAS:20082-71-7, PubChem_Compound:88361, ChemSpiderID:79715, ChemicalBookNo:CB8853291]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.743. XLMOD:07055 N-Methyl-N-trimethylsilyl-heptafluorobutyramide

Table 745. Term [XLMOD:07055]

id

XLMOD:07055

name

N-Methyl-N-trimethylsilyl-heptafluorobutyramide

def

"N-Methyl-N-trimethylsilyl-heptafluorobutyramide." [CAS:53296-64-3, PubChem_Compound:2775707, ChemSpiderID:2056039, ChemicalBookNo:CB1232811]

synonym

"Mshfba" EXACT []

is_a

XLMOD:06013 TMS reagent ! TMS reagent

2.744. XLMOD:07056 N-Methyl-N-trimethylsilylacetamide

Table 746. Term [XLMOD:07056]

id

XLMOD:07056

name

N-Methyl-N-trimethylsilylacetamide

def

"N-Methyl-N-trimethylsilylacetamide." [CAS:7449-74-3, PubChem_Compound:81953, ChemSpiderID:73958, ChemicalBookNo:CB4355232]

is_a

XLMOD:06013 TMS reagent ! TMS reagent

2.745. XLMOD:07057 hexamethyldisiloxane

Table 747. Term [XLMOD:07057]

id

XLMOD:07057

name

hexamethyldisiloxane

def

"Hexamethyldisiloxane." [CAS:107-46-0, PubChem_Compound:24764, ChemSpiderID:23150, ChemicalBookNo:CB2446352]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.746. XLMOD:07058 1,1,3,3-Tetramethyl-1,3-diphenyldisilazane

Table 748. Term [XLMOD:07058]

id

XLMOD:07058

name

1,1,3,3-Tetramethyl-1,3-diphenyldisilazane

def

"1,1,3,3-Tetramethyl-1,3-diphenyldisilazane." [CAS:3449-26-1, PubChem_Compound:76988, ChemSpiderID:69434, ChemicalBookNo:CB7212822]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.747. XLMOD:07059 N,N-Dimethyltrimethylsilylamine

Table 749. Term [XLMOD:07059]

id

XLMOD:07059

name

N,N-Dimethyltrimethylsilylamine

def

"N,N-Dimethyltrimethylsilylamine." [CAS:2083-91-2, PubChem_Compound:74965, ChemSpiderID:67521, ChemicalBookNo:CB1279847]

is_a

XLMOD:06013 TMS reagent ! TMS reagent

2.748. XLMOD:07060 N,N'-Bis(trimethylsilyl)urea

Table 750. Term [XLMOD:07060]

id

XLMOD:07060

name

N,N'-Bis(trimethylsilyl)urea

def

"N,N'-Bis(trimethylsilyl)urea." [CAS:18297-63-7, PubChem_Compound:87562, ChemSpiderID:78992, ChemicalBookNo:CB6152161]

is_a

XLMOD:06013 TMS reagent ! TMS reagent

2.749. XLMOD:07061 N,O-Bis(trimethylsilyl)carbamate

Table 751. Term [XLMOD:07061]

id

XLMOD:07061

name

N,O-Bis(trimethylsilyl)carbamate

def

"N,O-Bis(trimethylsilyl)carbamate." [CAS:35342-88-2, PubChem_Compound:3015764, ChemSpiderID:2283833, ChemicalBookNo:CB2248969]

is_a

XLMOD:06013 TMS reagent ! TMS reagent

2.750. XLMOD:07062 N,N-Bis(trimethylsilyl)methylamine

Table 752. Term [XLMOD:07062]

id

XLMOD:07062

name

N,N-Bis(trimethylsilyl)methylamine

def

"N,N-Bis(trimethylsilyl)methylamine." [CAS:920-68-3, PubChem_Compound:70199, ChemSpiderID:63385, ChemicalBookNo:CB0439806]

is_a

XLMOD:06013 TMS reagent ! TMS reagent

2.751. XLMOD:07063 bis(dimethylamino)dimethylsilane

Table 753. Term [XLMOD:07063]

id

XLMOD:07063

name

bis(dimethylamino)dimethylsilane

def

"Bis(dimethylamino)dimethylsilane." [CAS:3768-58-9, PubChem_Compound:77384, ChemSpiderID:69798, ChemicalBookNo:CB1214899]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.752. XLMOD:07064 Trimethylsilyl methallylsulfinate

Table 754. Term [XLMOD:07064]

id

XLMOD:07064

name

Trimethylsilyl methallylsulfinate

def

"Trimethylsilyl methallylsulfinate." [CAS:723336-86-5, PubChem_Compound:71312539, ChemSpiderID:28419285, ChemicalBookNo:CB32750948]

is_a

XLMOD:06013 TMS reagent ! TMS reagent

2.753. XLMOD:07065 Triethylsilyl methallylsulfinate

Table 755. Term [XLMOD:07065]

id

XLMOD:07065

name

Triethylsilyl methallylsulfinate

def

"Triethylsilyl methallylsulfinate." [CAS:850418-19-8, PubChem_Compound:71312540, ChemSpiderID:35789839, ChemicalBookNo:CB42756013]

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.754. XLMOD:07066 tert-Butyldimethylsilyl methallylsulfinate

Table 756. Term [XLMOD:07066]

id

XLMOD:07066

name

tert-Butyldimethylsilyl methallylsulfinate

def

"Tert-Butyldimethylsilyl methallylsulfinate." [CAS:850418-20-1, PubChem_Compound:71312541, ChemSpiderID:35789840, ChemicalBookNo:CB72750946]

synonym

"SILMAS-TBS" EXACT []

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.755. XLMOD:07067 methyltrifluoromethanesulfonate

Table 757. Term [XLMOD:07067]

id

XLMOD:07067

name

methyltrifluoromethanesulfonate

def

"Methyltrifluoromethanesulfonate." [CAS:333-27-7, PubChem_Compound:9526, ChemSpiderID:9153, ChemicalBookNo:CB9131563]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.756. XLMOD:07068 ethyl trifluoromethanesulfonate

Table 758. Term [XLMOD:07068]

id

XLMOD:07068

name

ethyl trifluoromethanesulfonate

def

"Ethyl trifluoromethanesulfonate." [CAS:425-75-2, PubChem_Compound:67924, ChemSpiderID:61241, ChemicalBookNo:CB4332659]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.757. XLMOD:07069 trichloroacetyl chloride

Table 759. Term [XLMOD:07069]

id

XLMOD:07069

name

trichloroacetyl chloride

def

"Trichloroacetyl chloride." [CAS:76-02-8, PubChem_Compound:6420, ChemSpiderID:6180, ChemicalBookNo:CB6854254]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.758. XLMOD:07070 2-Thenoyltrifluoroacetone

Table 760. Term [XLMOD:07070]

id

XLMOD:07070

name

2-Thenoyltrifluoroacetone

def

"2-Thenoyltrifluoroacetone." [CAS:326-91-0, PubChem_Compound:5601, ChemSpiderID:5399, ChemicalBookNo:CB3219722]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.759. XLMOD:07071 2,2,6,6-Tetramethyl-3,5-heptanedione

Table 761. Term [XLMOD:07071]

id

XLMOD:07071

name

2,2,6,6-Tetramethyl-3,5-heptanedione

def

"2,2,6,6-Tetramethyl-3,5-heptanedione." [CAS:1118-71-4, PubChem_Compound:70700, ChemSpiderID:63866, ChemicalBookNo:CB1373637]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.760. XLMOD:07072 N-Methyl-bis-heptafluorobutyramide

Table 762. Term [XLMOD:07072]

id

XLMOD:07072

name

N-Methyl-bis-heptafluorobutyramide

def

"N-Methyl-bis-heptafluorobutyramide." [CAS:73980-71-9, PubChem_Compound:597974, ChemSpiderID:519801, ChemicalBookNo:CB6699309]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.761. XLMOD:07073 N,N'-Diisopropyl-O-methylisourea

Table 763. Term [XLMOD:07073]

id

XLMOD:07073

name

N,N'-Diisopropyl-O-methylisourea

def

"N,N'-Diisopropyl-O-methylisourea." [CAS:54648-79-2, PubChem_Compound:383824, ChemSpiderID:340092, ChemicalBookNo:CB4130844]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.762. XLMOD:07074 3,3,3-Trifluoro-2-methoxy-2-phenylpropanoic acid

Table 764. Term [XLMOD:07074]

id

XLMOD:07074

name

3,3,3-Trifluoro-2-methoxy-2-phenylpropanoic acid

def

"3,3,3-Trifluoro-2-methoxy-2-phenylpropanoic acid." [CAS:81655-41-6, PubChem_Compound:86531, ChemSpiderID:5360910, ChemicalBookNo:CB4264981]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.763. XLMOD:07075 6,6,7,7,8,8,8-Heptafluoro-2,2-dimethyl-3,5-octanedione

Table 765. Term [XLMOD:07075]

id

XLMOD:07075

name

6,6,7,7,8,8,8-Heptafluoro-2,2-dimethyl-3,5-octanedione

def

"6,6,7,7,8,8,8-Heptafluoro-2,2-dimethyl-3,5-octanedione." [CAS:17587-22-3, PubChem_Compound:28614, ChemSpiderID:26612, ChemicalBookNo:CB2271873]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.764. XLMOD:07076 4-Bromophenacyl trifluoro-methanesulfonate

Table 766. Term [XLMOD:07076]

id

XLMOD:07076

name

4-Bromophenacyl trifluoro-methanesulfonate

def

"4-Bromophenacyl trifluoro-methanesulfonate." [CAS:93128-04-2, PubChem_Compound:125008, ChemSpiderID:111291, ChemicalBookNo:CB4137500]

synonym

"4-Bromophenacyl triflate" EXACT []

is_a

XLMOD:06004 acylation reagent ! acylation reagent

relationship

has_fluorophore XLMOD:06111 4-bromophenacyl ! 4-bromophenacyl

2.765. XLMOD:07077 2,3-Diaminotoluene

Table 767. Term [XLMOD:07077]

id

XLMOD:07077

name

2,3-Diaminotoluene

def

"2,3-Diaminotoluene." [CAS:2687-25-4, PubChem_Compound:17593, ChemSpiderID:16633, ChemicalBookNo:CB2736932]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.766. XLMOD:07078 2,6-Diamino-4-pyrimidinone

Table 768. Term [XLMOD:07078]

id

XLMOD:07078

name

2,6-Diamino-4-pyrimidinone

def

"2,6-Diamino-4-pyrimidinone." [CAS:56-06-4, PubChem_Compound:2944, ChemSpiderID:2840, ChemicalBookNo:CB0174912]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.767. XLMOD:07079 benzoic acid

Table 769. Term [XLMOD:07079]

id

XLMOD:07079

name

benzoic acid

def

"Benzoic acid." [CAS:65-85-0, PubChem_Compound:243, ChemSpiderID:238, ChemicalBookNo:CB8698780]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.768. XLMOD:07080 tert-Butyl methyl ether

Table 770. Term [XLMOD:07080]

id

XLMOD:07080

name

tert-Butyl methyl ether

def

"Tert-Butyl methyl ether." [CAS:1634-04-4, PubChem_Compound:15413, ChemSpiderID:14672, ChemicalBookNo:CB2853178]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.769. XLMOD:07081 ethyl acetoacetate

Table 771. Term [XLMOD:07081]

id

XLMOD:07081

name

ethyl acetoacetate

def

"Ethyl acetoacetate." [CAS:141-97-9, PubChem_Compound:8868, ChemSpiderID:13865426, ChemicalBookNo:CB0301721]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.770. XLMOD:07082 (1S)-(+)-Menthyl chloroformate

Table 772. Term [XLMOD:07082]

id

XLMOD:07082

name

(1S)-(+)-Menthyl chloroformate

def

"(1S)-(+)-Menthyl chloroformate." [CAS:7635-54-3, PubChem_Compound:2733329, ChemSpiderID:2015131, ChemicalBookNo:CB5397503]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.771. XLMOD:07083 butylboronic acid

Table 773. Term [XLMOD:07083]

id

XLMOD:07083

name

butylboronic acid

def

"Butylboronic acid." [CAS:4426-47-5, PubChem_Compound:20479, ChemSpiderID:19286, ChemicalBookNo:CB6431756]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

relationship

has_reactive_group XLMOD:00161 boronic acid ! boronic acid

2.772. XLMOD:07084 1-(Pentafluoropropionyl) imidazole

Table 774. Term [XLMOD:07084]

id

XLMOD:07084

name

1-(Pentafluoropropionyl) imidazole

def

"1-(Pentafluoropropionyl) imidazole." [CAS:71735-32-5, PubChem_Compound:100821, ChemSpiderID:91097, ChemicalBookNo:CB8441122]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.773. XLMOD:07085 hexafluoroacetylacetone

Table 775. Term [XLMOD:07085]

id

XLMOD:07085

name

hexafluoroacetylacetone

def

"Hexafluoroacetylacetone." [CAS:1522-22-1, PubChem_Compound:73706, ChemSpiderID:21106446, ChemicalBookNo:CB8188414]

synonym

"Hexafluoro-2,4-pentanedione" EXACT []

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.774. XLMOD:07086 2,3,4,5,6-Pentafluorobenzaldehyde

Table 776. Term [XLMOD:07086]

id

XLMOD:07086

name

2,3,4,5,6-Pentafluorobenzaldehyde

def

"2,3,4,5,6-Pentafluorobenzaldehyde." [CAS:653-37-2, PubChem_Compound:69558, ChemSpiderID:21106527, ChemicalBookNo:CB6754598]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.775. XLMOD:07087 pentafluorobenzenesulfonyl chloride

Table 777. Term [XLMOD:07087]

id

XLMOD:07087

name

pentafluorobenzenesulfonyl chloride

def

"Pentafluorobenzenesulfonyl chloride." [CAS:832-53-1, PubChem_Compound:70026, ChemSpiderID:63216, ChemicalBookNo:CB7243712]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.776. XLMOD:07088 1,1,1-Trifluoro-2,4-pentanedione

Table 778. Term [XLMOD:07088]

id

XLMOD:07088

name

1,1,1-Trifluoro-2,4-pentanedione

def

"1,1,1-Trifluoro-2,4-pentanedione." [CAS:367-57-7, PubChem_Compound:73943, ChemSpiderID:66573, ChemicalBookNo:CB6699233]

is_a

XLMOD:06015 TFA reagent ! TFA reagent

2.777. XLMOD:07089 1,1,1-Trifluoroacetone

Table 779. Term [XLMOD:07089]

id

XLMOD:07089

name

1,1,1-Trifluoroacetone

def

"1,1,1-Trifluoroacetone." [CAS:421-50-1, PubChem_Compound:9871, ChemSpiderID:21111803, ChemicalBookNo:CB4123453]

is_a

XLMOD:06015 TFA reagent ! TFA reagent

2.778. XLMOD:07090 4-(Trifluoromethyl)benzoyl chloride

Table 780. Term [XLMOD:07090]

id

XLMOD:07090

name

4-(Trifluoromethyl)benzoyl chloride

def

"4-(Trifluoromethyl)benzoyl chloride." [CAS:329-15-7, PubChem_Compound:67607, ChemSpiderID:60927, ChemicalBookNo:CB9762316]

is_a

XLMOD:06015 TFA reagent ! TFA reagent

2.779. XLMOD:07091 8-Quinolinesulfonyl chloride

Table 781. Term [XLMOD:07091]

id

XLMOD:07091

name

8-Quinolinesulfonyl chloride

def

"8-Quinolinesulfonyl chloride." [CAS:18704-37-5, PubChem_Compound:29220, ChemSpiderID:27177, ChemicalBookNo:CB8329163]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.780. XLMOD:07092 (1R)-(-)-Menthyl chloroformate

Table 782. Term [XLMOD:07092]

id

XLMOD:07092

name

(1R)-(-)-Menthyl chloroformate

def

"(1R)-(-)-Menthyl chloroformate." [CAS:14602-86-9, PubChem_Compound:7014897, ChemSpiderID:17206727, ChemicalBookNo:CB7248919]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.781. XLMOD:07093 phenylboronic acid

Table 783. Term [XLMOD:07093]

id

XLMOD:07093

name

phenylboronic acid

def

"Phenylboronic acid." [CAS:98-80-6, PubChem_Compound:66827, ChemSpiderID:60191, ChemicalBookNo:CB5323625]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

relationship

has_reactive_group XLMOD:00161 boronic acid ! boronic acid

2.782. XLMOD:07094 methylboronic acid

Table 784. Term [XLMOD:07094]

id

XLMOD:07094

name

methylboronic acid

def

"Methylboronic acid." [CAS:13061-96-6, PubChem_Compound:139377, ChemSpiderID:122904, ChemicalBookNo:CB3373202]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

relationship

has_reactive_group XLMOD:00161 boronic acid ! boronic acid

2.783. XLMOD:07095 2,3,4,5,6-Pentafluorobenzoic anhydride

Table 785. Term [XLMOD:07095]

id

XLMOD:07095

name

2,3,4,5,6-Pentafluorobenzoic anhydride

def

"2,3,4,5,6-Pentafluorobenzoic anhydride." [CAS:15989-99-8, PubChem_Compound:189034, ChemSpiderID:164254, ChemicalBookNo:CB3497119]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.784. XLMOD:07096 4-(Dimethylamino)benzoyl chloride

Table 786. Term [XLMOD:07096]

id

XLMOD:07096

name

4-(Dimethylamino)benzoyl chloride

def

"4-(Dimethylamino)benzoyl chloride." [CAS:4755-50-4, PubChem_Compound:4400782, ChemSpiderID:3601987, ChemicalBookNo:CB6399872]

is_a

XLMOD:06004 acylation reagent ! acylation reagent

2.785. XLMOD:07097 boron trifluoride butanol

Table 787. Term [XLMOD:07097]

id

XLMOD:07097

name

boron trifluoride butanol

def

"Boron trifluoride butanol." [CAS:7637-07-2, PubChem_Compound:6356, ChemSpiderID:6116, ChemicalBookNo:CB3238105]

synonym

"BF3-butanol" EXACT []

is_a

XLMOD:06016 boron trifluoride reagent ! boron trifluoride reagent

2.786. XLMOD:07098 1,1,1,3,3,3-Hexafluoro-2-propanol

Table 788. Term [XLMOD:07098]

id

XLMOD:07098

name

1,1,1,3,3,3-Hexafluoro-2-propanol

def

"1,1,1,3,3,3-Hexafluoro-2-propanol." [CAS:920-66-1, PubChem_Compound:13529, ChemSpiderID:10606755, ChemicalBookNo:CB3251829]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.787. XLMOD:07099 2,2,3,3,3-Pentafluoro-1-propanol

Table 789. Term [XLMOD:07099]

id

XLMOD:07099

name

2,2,3,3,3-Pentafluoro-1-propanol

def

"2,2,3,3,3-Pentafluoro-1-propanol." [CAS:422-05-9, PubChem_Compound:9872, ChemSpiderID:9488, ChemicalBookNo:CB9689963]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.788. XLMOD:07100 2,3,5,6-Tetrafluoro-4-ethanol(trifluoromethyl)benzyl bromide

Table 790. Term [XLMOD:07100]

id

XLMOD:07100

name

2,3,5,6-Tetrafluoro-4-ethanol(trifluoromethyl)benzyl bromide

def

"2,3,5,6-Tetrafluoro-4-ethanol(trifluoromethyl)benzyl bromide." [CAS:76437-40-6, PubChem_Compound:127137, ChemSpiderID:112859, ChemicalBookNo:CB1682115]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

relationship

has_reactive_group XLMOD:00168 benzyl bromide reactive group ! benzyl bromide reactive group

2.789. XLMOD:07101 2,3-Dihydroxy-biphenyl

Table 791. Term [XLMOD:07101]

id

XLMOD:07101

name

2,3-Dihydroxy-biphenyl

def

"2,3-Dihydroxy-biphenyl." [CAS:1133-63-7, PubChem_Compound:254, ChemSpiderID:249, ChemicalBookNo:CB0302647]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.790. XLMOD:07102 O-(2,3,4,5,6-Pentafluorobenzyl)hydroxylamine hydrochloride

Table 792. Term [XLMOD:07102]

id

XLMOD:07102

name

O-(2,3,4,5,6-Pentafluorobenzyl)hydroxylamine hydrochloride

def

"O-(2,3,4,5,6-Pentafluorobenzyl)hydroxylamine hydrochloride." [CAS:57981-02-9, PubChem_Compound:122307, ChemSpiderID:109062, ChemicalBookNo:CB8307815]

synonym

"Florox reagent" EXACT []

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.791. XLMOD:07103 pentafluoroiodoethane

Table 793. Term [XLMOD:07103]

id

XLMOD:07103

name

pentafluoroiodoethane

def

"Pentafluoroiodoethane." [CAS:354-64-3, PubChem_Compound:9636, ChemSpiderID:9259, ChemicalBookNo:CB1226715]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.792. XLMOD:07104 tetrabutylammoniumtetrabutylborate

Table 794. Term [XLMOD:07104]

id

XLMOD:07104

name

tetrabutylammoniumtetrabutylborate

def

"Tetrabutylammoniumtetrabutylborate." [CAS:23231-91-6, PubChem_Compound:11123692, ChemSpiderID:9298821, ChemicalBookNo:CB9765711]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.793. XLMOD:07105 trimethylboroxine

Table 795. Term [XLMOD:07105]

id

XLMOD:07105

name

trimethylboroxine

def

"Trimethylboroxine." [CAS:823-96-1, PubChem_Compound:574072, ChemSpiderID:499140, ChemicalBookNo:499140]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.794. XLMOD:07107 boron trifluoride propanol

Table 796. Term [XLMOD:07107]

id

XLMOD:07107

name

boron trifluoride propanol

def

"Boron trifluoride propanol." [CAS:762-48-1, ChemSpiderID:11428571, ChemicalBookNo:CB7289428]

synonym

"BF3-propanol" EXACT []

is_a

XLMOD:06016 boron trifluoride reagent ! boron trifluoride reagent

2.795. XLMOD:07108 4-Bromobenzyl bromide

Table 797. Term [XLMOD:07108]

id

XLMOD:07108

name

4-Bromobenzyl bromide

def

"4-Bromobenzyl bromide." [CAS:589-15-1, PubChem_Compound:68527, ChemSpiderID:61802, ChemicalBookNo:CB8313784]

is_a

XLMOD:06020 arylation reagent ! arylation reagent

relationship

has_reactive_group XLMOD:00168 benzyl bromide reactive group ! benzyl bromide reactive group

2.796. XLMOD:07109 N,N-Dimethylformamidediethyl acetal

Table 798. Term [XLMOD:07109]

id

XLMOD:07109

name

N,N-Dimethylformamidediethyl acetal

def

"N,N-Dimethylformamidediethyl acetal." [CAS:1188-33-6, PubChem_Compound:70913, ChemSpiderID:64076, ChemicalBookNo:CB6665913]

synonym

"1,1-Diethoxy-N,N-dimethylmethanamine" EXACT []

is_a

XLMOD:06017 N,N-Dimethylformamidedialkyl acetal ! N,N-Dimethylformamidedialkyl acetal

2.797. XLMOD:07110 N,N-Dimethylformamidedibutyl acetal

Table 799. Term [XLMOD:07110]

id

XLMOD:07110

name

N,N-Dimethylformamidedibutyl acetal

def

"N,N-Dimethylformamidedibutyl acetal." [CAS:18503-90-7, PubChem_Compound:87683, ChemSpiderID:79103, ChemicalBookNo:CB8770217]

synonym

"1,1-Dibutoxy-N,N-dimethylmethanamine" EXACT []

is_a

XLMOD:06017 N,N-Dimethylformamidedialkyl acetal ! N,N-Dimethylformamidedialkyl acetal

2.798. XLMOD:07111 N,N-Dimethylformamidediisopropyl acetal

Table 800. Term [XLMOD:07111]

id

XLMOD:07111

name

N,N-Dimethylformamidediisopropyl acetal

def

"N,N-Dimethylformamidediisopropyl acetal." [CAS:18503-89-4, PubChem_Compound:87682, ChemSpiderID:79102, ChemicalBookNo:CB1137822]

is_a

XLMOD:06017 N,N-Dimethylformamidedialkyl acetal ! N,N-Dimethylformamidedialkyl acetal

2.799. XLMOD:07112 N,N-Dimethylformamidedineopentyl acetal

Table 801. Term [XLMOD:07112]

id

XLMOD:07112

name

N,N-Dimethylformamidedineopentyl acetal

def

"N,N-Dimethylformamidedineopentyl acetal." [CAS:4909-78-8, PubChem_Compound:78623, ChemSpiderID:70980, ChemicalBookNo:CB1335538]

is_a

XLMOD:06017 N,N-Dimethylformamidedialkyl acetal ! N,N-Dimethylformamidedialkyl acetal

2.800. XLMOD:07113 N,N-Dimethylformamidedipropyl acetal

Table 802. Term [XLMOD:07113]

id

XLMOD:07113

name

N,N-Dimethylformamidedipropyl acetal

def

"N,N-Dimethylformamidedipropyl acetal." [CAS:6006-65-1, PubChem_Compound:80105, ChemSpiderID:72355, ChemicalBookNo:CB4137823]

is_a

XLMOD:06017 N,N-Dimethylformamidedialkyl acetal ! N,N-Dimethylformamidedialkyl acetal

2.801. XLMOD:07114 N,N-Dimethylformamidedi-tert-butyl acetal

Table 803. Term [XLMOD:07114]

id

XLMOD:07114

name

N,N-Dimethylformamidedi-tert-butyl acetal

def

"N,N-Dimethylformamidedi-tert-butyl acetal." [CAS:36805-97-7, PubChem_Compound:547712, ChemSpiderID:476708, ChemicalBookNo:CB5296219]

is_a

XLMOD:06017 N,N-Dimethylformamidedialkyl acetal ! N,N-Dimethylformamidedialkyl acetal

2.802. XLMOD:07115 nonafluoro-1-iodobutane

Table 804. Term [XLMOD:07115]

id

XLMOD:07115

name

nonafluoro-1-iodobutane

def

"Nonafluoro-1-iodobutane." [CAS:423-39-2, PubChem_Compound:67917, ChemSpiderID:61234, ChemicalBookNo:CB9474482]

synonym

"Perfluorobutyl iodide" EXACT []

synonym

"1-Iodoperfluorobutane" EXACT []

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.803. XLMOD:07116 triethyloxonium tetrafluoroborate

Table 805. Term [XLMOD:07116]

id

XLMOD:07116

name

triethyloxonium tetrafluoroborate

def

"Triethyloxonium tetrafluoroborate." [CAS:368-39-8, PubChem_Compound:2723982, ChemSpiderID:2006158, ChemicalBookNo:CB0198800]

is_a

XLMOD:06019 trialkyloxonium reagent ! trialkyloxonium reagent

2.804. XLMOD:07117 2,2,2-Trichloroethanol

Table 806. Term [XLMOD:07117]

id

XLMOD:07117

name

2,2,2-Trichloroethanol

def

"2,2,2-Trichloroethanol." [CAS:115-20-8, PubChem_Compound:8259, ChemSpiderID:7961, ChemicalBookNo:CB7257753]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.805. XLMOD:07118 triethyloxonium hexafluorophosphate

Table 807. Term [XLMOD:07118]

id

XLMOD:07118

name

triethyloxonium hexafluorophosphate

def

"Triethyloxonium hexafluorophosphate." [CAS:17950-40-2, PubChem_Compound:167684, ChemSpiderID:146692, ChemicalBookNo:CB4151711]

is_a

XLMOD:06019 trialkyloxonium reagent ! trialkyloxonium reagent

2.806. XLMOD:07119 2,2,2-Trifluoroethanol

Table 808. Term [XLMOD:07119]

id

XLMOD:07119

name

2,2,2-Trifluoroethanol

def

"2,2,2-Trifluoroethanol." [CAS:75-89-8, PubChem_Compound:6409, ChemSpiderID:21106169, ChemicalBookNo:CB5736665]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.807. XLMOD:07120 trimethyloxonium tetrafluoroborate

Table 809. Term [XLMOD:07120]

id

XLMOD:07120

name

trimethyloxonium tetrafluoroborate

def

"Trimethyloxonium tetrafluoroborate." [CAS:420-37-1, PubChem_Compound:2735153, ChemSpiderID:2016863, ChemicalBookNo:CB3184284]

is_a

XLMOD:06019 trialkyloxonium reagent ! trialkyloxonium reagent

2.808. XLMOD:07121 2,2-Dimethoxypropane

Table 810. Term [XLMOD:07121]

id

XLMOD:07121

name

2,2-Dimethoxypropane

def

"2,2-Dimethoxypropane." [CAS:77-76-9, PubChem_Compound:6495, ChemSpiderID:21106033, ChemicalBookNo:CB9373512]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.809. XLMOD:07122 4-Tolylsulfonylmethylnitrosamide

Table 811. Term [XLMOD:07122]

id

XLMOD:07122

name

4-Tolylsulfonylmethylnitrosamide

def

"4-Tolylsulfonylmethylnitrosamide." [CAS:80-11-5, PubChem_Compound:6628, ChemSpiderID:6376, ChemicalBookNo:CB7663729]

synonym

"Diazald" EXACT []

synonym

"N-Methyl-N-nitrosotoluene-4-sulphonamide" EXACT []

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.810. XLMOD:07123 18-Crown-6

Table 812. Term [XLMOD:07123]

id

XLMOD:07123

name

18-Crown-6

def

"18-Crown-6." [CAS:17455-13-9, PubChem_Compound:28557, ChemSpiderID:26563, ChemicalBookNo:CB4445218]

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

2.811. XLMOD:07124 3-Aminopropyltriethoxysilane

Table 813. Term [XLMOD:07124]

id

XLMOD:07124

name

3-Aminopropyltriethoxysilane

def

"3-Aminopropyltriethoxysilane." [CAS:919-30-2, PubChem_Compound:13521, ChemSpiderID:12933, ChemicalBookNo:CB8686147]

synonym

"APTES" EXACT []

is_a

XLMOD:06003 silylation reagent ! silylation reagent

2.812. XLMOD:09000 dansyl chloride

Table 814. Term [XLMOD:09000]

id

XLMOD:09000

name

dansyl chloride

def

"Dansyl chloride." [CAS:605-65-2, PubChem_Compound:14513518, ChemSpiderID:11308, ChemicalBookNo:CB5696240, PMID:23524938]

synonym

"DNS-Cl" EXACT []

synonym

"5-dimethylamino-1-naphthalenesulfonyl chloride" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00156 sulfonyl chloride ! sulfonyl chloride

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

relationship

is_reactive_with XLMOD:06515 nucleoside reactive ! nucleoside reactive

2.813. XLMOD:09001 picolinic acid

Table 815. Term [XLMOD:09001]

id

XLMOD:09001

name

picolinic acid

def

"Picolinic acid." [CAS:98-98-6, PubChem_Compound:1018, ChemSpiderID:993, ChemicalBookNo:CB8196640, PMID:23524938]

synonym

"PA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.814. XLMOD:09002 fusaric acid

Table 816. Term [XLMOD:09002]

id

XLMOD:09002

name

fusaric acid

def

"Fusaric acid." [CAS:536-69-6, PubChem_Compound:3442, ChemSpiderID:3324, ChemicalBookNo:CB4689029, PMID:23524938]

synonym

"FA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

2.815. XLMOD:09003 dimethylglycine

Table 817. Term [XLMOD:09003]

id

XLMOD:09003

name

dimethylglycine

def

"Dimethylglycine." [CAS:1118-68-9, PubChem_Compound:673, ChemSpiderID:653, ChemicalBookNo:1118-68-9, PMID:23524938]

synonym

"N,N-Dimethylglycine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

2.816. XLMOD:09004 isonicotinoyl azide

Table 818. Term [XLMOD:09004]

id

XLMOD:09004

name

isonicotinoyl azide

def

"Isonicotinoyl azide." [PubChem_Compound:11701058, ChemSpiderID:9875783, ChemicalBookNo:CB1385038, PMID:23524938, PMID:26454158]

synonym

"INA" EXACT []

synonym

"Pyridine-4-carbonyl azide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.817. XLMOD:09005 NA-NHS ester

Table 819. Term [XLMOD:09005]

id

XLMOD:09005

name

NA-NHS ester

def

"N-hydroxysuccinimide esters of N-alkyl(C1-C4)nicotinic acids." [PMID:16808485, PMID:22575224]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.818. XLMOD:09006 2-fluoro-1-methylpyridinium p-toluenesulfonate

Table 820. Term [XLMOD:09006]

id

XLMOD:09006

name

2-fluoro-1-methylpyridinium p-toluenesulfonate

def

"2-fluoro-1-methylpyridinium p-toluenesulfonate." [CAS:58086-67-2, ChemSpiderID:150036, ChemicalBookNo:CB1142305, PMID:23524938]

synonym

"FMP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00165 sulfonate ! sulfonate

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.819. XLMOD:09007 3-nitrophthalic anhydride

Table 821. Term [XLMOD:09007]

id

XLMOD:09007

name

3-nitrophthalic anhydride

def

"3-nitrophthalic anhydride." [CAS:641-70-3, PubChem_Compound:21631, ChemSpiderID:20330, ChemicalBookNo:CB8116378, PMID:7802865, PMID:23524938]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00166 anhydride ! anhydride

2.820. XLMOD:09008 2-hydrazino-1-methylpyridine

Table 822. Term [XLMOD:09008]

id

XLMOD:09008

name

2-hydrazino-1-methylpyridine

def

"2-hydrazino-1-methylpyridine." [ChemSpiderID:21376238, PMID:23524938]

synonym

"HMP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.821. XLMOD:09009 2-hydrazinopyridine

Table 823. Term [XLMOD:09009]

id

XLMOD:09009

name

2-hydrazinopyridine

def

"2-hydrazinopyridine." [CAS:4930-98-7, PubChem_Compound:78645, ChemSpiderID:71000, ChemicalBookNo:CB0389206, PMID:23524938, PMID:26454158]

synonym

"HP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.822. XLMOD:09010 dansyl hydrazine

Table 824. Term [XLMOD:09010]

id

XLMOD:09010

name

dansyl hydrazine

def

"Dansyl hydrazine." [CAS:33008-06-9, PubChem_Compound:94442, ChemSpiderID:85229, ChemicalBookNo:CB9236754, PMID:23524938]

synonym

"Dns-Hz" EXACT []

synonym

"DH" EXACT []

synonym

"5-dimethylaminonaphthalene-1-sulfonyl hydrazine" EXACT []

synonym

"5-(Dimethylamino)-1-naphthalenesulfonohydrazide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.823. XLMOD:09011 Girard’s reagent P

Table 825. Term [XLMOD:09011]

id

XLMOD:09011

name

Girard’s reagent P

def

"Pyridinioacetohydrazide chloride." [CAS:1126-58-5, PubChem_Compound:70773, ChemSpiderID:63938, ChemicalBookNo:CB2285753, PMID:23524938]

synonym

"Gir P" EXACT []

synonym

"GP" EXACT []

synonym

"1-(carboxymethyl)pyridium chloride hydrazide" EXACT []

synonym

"1-(2-hydrazino-2-oxoethyl)pyridinium chloride" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.824. XLMOD:09012 Girard’s reagent T

Table 826. Term [XLMOD:09012]

id

XLMOD:09012

name

Girard’s reagent T

def

"Betaine Hydrazide Hydrochloride." [CAS:123-46-6, PubChem_Compound:67156, ChemSpiderID:60501, ChemicalBookNo:CB9414297, PMID:23524938]

synonym

"Gir T" EXACT []

synonym

"GT" EXACT []

synonym

"1-(carboxymethyl)trimethylammonium chloride hydrazide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_reactive_with XLMOD:06515 nucleoside reactive ! nucleoside reactive

2.825. XLMOD:09013 2,4-dinitrophenylhydrazine

Table 827. Term [XLMOD:09013]

id

XLMOD:09013

name

2,4-dinitrophenylhydrazine

def

"2,4-dinitrophenylhydrazine." [CAS:119-26-6, PubChem_Compound:3772977, ChemSpiderID:3001507, ChemicalBookNo:CB4852908, PMID:23524938]

synonym

"DNPH" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_fluorophore XLMOD:06104 2,4-dinitrophenyl ! 2,4-dinitrophenyl

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.826. XLMOD:09014 hydroxylamine

Table 828. Term [XLMOD:09014]

id

XLMOD:09014

name

hydroxylamine

def

"Hydroxylamine." [CAS:7803-49-8, PubChem_Compound:787, ChemSpiderID:766, ChemicalBookNo:CB3345090, PMID:23524938]

synonym

"HA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.827. XLMOD:09015 4-[2-(Trimethylammonio)ethoxy]anilinium dibromide

Table 829. Term [XLMOD:09015]

id

XLMOD:09015

name

4-[2-(Trimethylammonio)ethoxy]anilinium dibromide

def

"4-[2-(Trimethylammonio)ethoxy]anilinium dibromide." [CAS:1076196-38-7, ChemSpiderID:29342342, ChemicalBookNo:CB32747247, PMID:23524938]

synonym

"4-APC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.828. XLMOD:09016 4-(2-((4-bromophenethyl)dimethylammonio)ethoxy)benzenaminium dibromide

Table 830. Term [XLMOD:09016]

id

XLMOD:09016

name

4-(2-((4-bromophenethyl)dimethylammonio)ethoxy)benzenaminium dibromide

def

"4-(2-((4-bromophenethyl)dimethylammonio)ethoxy)benzenaminium dibromide." [CAS:197305-97-8, PubChem_Compound:91826487, ChemSpiderID:1064766, ChemicalBookNo:CB7444959, PMID:23524938]

synonym

"4-APEBA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.829. XLMOD:09017 D-Cysteine

Table 831. Term [XLMOD:09017]

id

XLMOD:09017

name

D-Cysteine

def

"D-Cysteine." [CAS:921-01-7, PubChem_Compound:92851, ChemSpiderID:83819, ChemicalBookNo:CB4407452, PMID:23524938]

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.830. XLMOD:09018 2-Picolylamine

Table 832. Term [XLMOD:09018]

id

XLMOD:09018

name

2-Picolylamine

def

"2-Picolylamine." [CAS:3731-51-9, PubChem_Compound:19509, ChemSpiderID:18383, ChemicalBookNo:CB8853569, PMID:23524938]

synonym

"2-PA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.831. XLMOD:09019 3-Picolylamine

Table 833. Term [XLMOD:09019]

id

XLMOD:09019

name

3-Picolylamine

def

"3-Picolylamine." [CAS:3731-52-0, PubChem_Compound:31018, ChemSpiderID:28777, ChemicalBookNo:CB2284635, PMID:23524938]

synonym

"3-PA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.832. XLMOD:09020 3-picolylcarbinol

Table 834. Term [XLMOD:09020]

id

XLMOD:09020

name

3-picolylcarbinol

def

"3-picolylcarbinol." [ChemSpiderID:72714, PMID:23524938]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.833. XLMOD:09021 3-Hydroxy-1-methyl-piperidine

Table 835. Term [XLMOD:09021]

id

XLMOD:09021

name

3-Hydroxy-1-methyl-piperidine

def

"3-Hydroxy-1-methyl-piperidine." [CAS:3554-74-3, PubChem_Compound:98016, ChemSpiderID:88489, ChemicalBookNo:CB7340664, PMID:23524938]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.834. XLMOD:09022 3-(Hydroxymethyl)-pyridine

Table 836. Term [XLMOD:09022]

id

XLMOD:09022

name

3-(Hydroxymethyl)-pyridine

def

"3-(Hydroxymethyl)-pyridine." [CAS:100-55-0, PubChem_Compound:7510, ChemSpiderID:7229, ChemicalBookNo:CB6384809, PMID:23524938]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.835. XLMOD:09023 4-Diazomethylpyridine

Table 837. Term [XLMOD:09023]

id

XLMOD:09023

name

4-Diazomethylpyridine

def

"4-Diazomethylpyridine." [CAS:26363-69-9, PubChem_Compound:12066686, ChemSpiderID:57445102, PMID:23524938]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.836. XLMOD:09024 4-[2-(N,Ndimethylamino)ethylaminosulfonyl]-7-(2-aminoethylamino)-2,1,3-benzoxadiazole

Table 838. Term [XLMOD:09024]

id

XLMOD:09024

name

4-[2-(N,Ndimethylamino)ethylaminosulfonyl]-7-(2-aminoethylamino)-2,1,3-benzoxadiazole

def

"4-[2-(N,Ndimethylamino)ethylaminosulfonyl]-7-(2-aminoethylamino)-2,1,3-benzoxadiazole." [CAS:913253-56-2, PubChem_Compound:91247932, ChemSpiderID:21377953, ChemicalBookNo:CB62720627, PMID:23524938]

synonym

"DAABD-AE" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.837. XLMOD:09025 1-Butanol hydrochloride

Table 839. Term [XLMOD:09025]

id

XLMOD:09025

name

1-Butanol hydrochloride

def

"1-Butanol hydrochloride." [ChemSpiderID:13206062, PMID:23524938]

synonym

"Butanol + HCl" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.838. XLMOD:09026 fluorenylmethyloxycarbonyl chloride

Table 840. Term [XLMOD:09026]

id

XLMOD:09026

name

fluorenylmethyloxycarbonyl chloride

def

"Fluorenylmethyloxycarbonyl chloride." [CAS:28920-43-6, PubChem_Compound:34367, ChemSpiderID:31647, ChemicalBookNo:CB7234569, PMID:23524938]

synonym

"FMOC-Cl" EXACT []

synonym

"1-(9-Fluorenyl)methyl chloroformate" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.839. XLMOD:09027 N-Methyl-2-phenylethanamide

Table 841. Term [XLMOD:09027]

id

XLMOD:09027

name

N-Methyl-2-phenylethanamide

def

"N-Methyl-2-phenylethanamide." [CAS:6830-82-6, PubChem_Compound:81274, ChemSpiderID:73329, ChemicalBookNo:CB4717700, PMID:23524938]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.840. XLMOD:09028 2-Bromo-1-(4-(dimethylamino)phenyl)ethanone

Table 842. Term [XLMOD:09028]

id

XLMOD:09028

name

2-Bromo-1-(4-(dimethylamino)phenyl)ethanone

def

"2-Bromo-1-(4-(dimethylamino)phenyl)ethanone." [CAS:37904-72-6, PubChem_Compound:142225, ChemSpiderID:125460, ChemicalBookNo:CB4113692, PMID:23524938]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.841. XLMOD:09029 6-aminoquinolyl-N-hydroxysuccinimidyl carbamate

Table 843. Term [XLMOD:09029]

id

XLMOD:09029

name

6-aminoquinolyl-N-hydroxysuccinimidyl carbamate

def

"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate." [ChemSpiderID:2043270, PMID:23524938, PMID:16384748]

synonym

"6-ACQ" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00164 carabamate ! carbamate

2.842. XLMOD:09030 3-Pyridyl isothiocyanate

Table 844. Term [XLMOD:09030]

id

XLMOD:09030

name

3-Pyridyl isothiocyanate

def

"3-Pyridyl isothiocyanate." [CAS:17452-27-6, PubChem_Compound:2737242, ChemSpiderID:2018885, ChemicalBookNo:CB4371720, PMID:23524938]

synonym

"3-Isothiocyanatopyridine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

2.843. XLMOD:09031 phenyl isothiocyanate

Table 845. Term [XLMOD:09031]

id

XLMOD:09031

name

phenyl isothiocyanate

def

"Phenyl isothiocyanate." [CAS:103-72-0, PubChem_Compound:7673, ChemSpiderID:7390, ChemicalBookNo:CB5733806, PMID:23524938, PMID:26496130]

synonym

"PITC" EXACT []

synonym

"Edman’s reagent" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

2.844. XLMOD:09032 isobutyl chloroformate

Table 846. Term [XLMOD:09032]

id

XLMOD:09032

name

isobutyl chloroformate

def

"Isobutyl chloroformate." [CAS:543-27-1, PubChem_Compound:62365, ChemSpiderID:56154, ChemicalBookNo:CB7165612, PMID:23524938]

synonym

"IBCF" EXACT []

synonym

"i-BuCF" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

relationship

is_reactive_with XLMOD:06511 biphosphonate drug reactive ! biphosphonate drug reactive

2.845. XLMOD:09033 4-(N,N-Dimethylaminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole

Table 847. Term [XLMOD:09033]

id

XLMOD:09033

name

4-(N,N-Dimethylaminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole

def

"4-(N,N-Dimethylaminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole." [CAS:98358-90-8, PubChem_Compound:126917, ChemSpiderID:112705, ChemicalBookNo:CB3366336, PMID:23524938, PMID:27582321]

synonym

"DBD-F" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00158 halobenzofurazan ! halobenzofurazan

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.846. XLMOD:09034 4-Bromophenacyl bromide

Table 848. Term [XLMOD:09034]

id

XLMOD:09034

name

4-Bromophenacyl bromide

def

"4-Bromophenacyl bromide." [CAS:99-73-0, PubChem_Compound:7454, ChemSpiderID:7174, ChemicalBookNo:CB4239093, PMID:23524938]

synonym

"BPBr" EXACT []

synonym

"p-Bromophenacyl bromide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_fluorophore XLMOD:06111 4-bromophenacyl ! 4-bromophenacyl

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06522 perfluorinated carboxylic acid reactive ! perfluorinated carboxylic acid reactive

2.847. XLMOD:09035 ethyl bromoacetate

Table 849. Term [XLMOD:09035]

id

XLMOD:09035

name

ethyl bromoacetate

def

"Ethyl bromoacetate." [CAS:105-36-2, PubChem_Compound:7748, ChemSpiderID:7462, ChemicalBookNo:CB6852654, PMID:23524938]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.848. XLMOD:09036 (2-[4-aminophenoxy]ethyl)trimethylammonium bromide

Table 850. Term [XLMOD:09036]

id

XLMOD:09036

name

(2-[4-aminophenoxy]ethyl)trimethylammonium bromide

def

"(2-[4-aminophenoxy]ethyl)trimethylammonium bromide." [ChemSpiderID:24770517, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

2.849. XLMOD:09037 hydroxylammonium chloride

Table 851. Term [XLMOD:09037]

id

XLMOD:09037

name

hydroxylammonium chloride

def

"Hydroxylammonium chloride." [CAS:5470-11-1, PubChem_Compound:443297, ChemSpiderID:391543, ChemicalBookNo:CB8128885, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

2.850. XLMOD:09038 4-Bromobenzenesulfonyl chloride

Table 852. Term [XLMOD:09038]

id

XLMOD:09038

name

4-Bromobenzenesulfonyl chloride

def

"4-Bromobenzenesulfonyl chloride." [CAS:98-58-8, ChemSpiderID:7118, ChemicalBookNo:CB8443863, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00156 sulfonyl chloride ! sulfonyl chloride

2.851. XLMOD:09039 7-fluoro-4-nitrobenzoxadiazole

Table 853. Term [XLMOD:09039]

id

XLMOD:09039

name

7-fluoro-4-nitrobenzoxadiazole

def

"7-fluoro-4-nitrobenzoxadiazole." [PubChem_Compound:53744831, ChemSpiderID:21375215, PMID:22191594]

synonym

"NBD-F" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.852. XLMOD:09040 diacetyl-L-tartaric anhydride

Table 854. Term [XLMOD:09040]

id

XLMOD:09040

name

diacetyl-L-tartaric anhydride

def

"Diacetyl-L-tartaric anhydride." [CAS:6283-74-5, PubChem_Compound:102020809, ChemSpiderID:448369, ChemicalBookNo:CB0717661, PMID:22191594, PMID:26496130]

synonym

"DATAN" EXACT []

synonym

"DATAAN" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00166 anhydride ! anhydride

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.853. XLMOD:09041 pentafluorophenacyl trifluoromethanesulfonate

Table 855. Term [XLMOD:09041]

id

XLMOD:09041

name

pentafluorophenacyl trifluoromethanesulfonate

def

"Pentafluorophenacyl trifluoromethanesulfonate." [PubChem_Compound:86038332, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_fluorophore XLMOD:06110 phenacyl ! phenacyl

relationship

has_reactive_group XLMOD:00165 sulfonate ! sulfonate

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.854. XLMOD:09042 propyl chloroformate

Table 856. Term [XLMOD:09042]

id

XLMOD:09042

name

propyl chloroformate

def

"Propyl chloroformate." [CAS:109-61-5, PubChem_Compound:7998, ChemSpiderID:7707, ChemicalBookNo:CB9852781, PMID:22191594]

synonym

"PrCl" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.855. XLMOD:09043 12,4-dinitrofluorobenzene

Table 857. Term [XLMOD:09043]

id

XLMOD:09043

name

12,4-dinitrofluorobenzene

def

"12,4-dinitrofluorobenzene." [CAS:70-34-8, PubChem_Compound:6264, ChemSpiderID:21106037, ChemicalBookNo:CB9442373, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.856. XLMOD:09044 trimethylsilyldiazomethane

Table 858. Term [XLMOD:09044]

id

XLMOD:09044

name

trimethylsilyldiazomethane

def

"Trimethylsilyldiazomethane." [CAS:18107-18-1, PubChem_Compound:167693, ChemSpiderID:146699, ChemicalBookNo:CB9432840, PMID:22191594, PMID:19525080]

synonym

"TMS-DAM" EXACT []

synonym

"TMS-DM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

is_a

XLMOD:06013 TMS reagent ! TMS reagent

relationship

is_reactive_with XLMOD:06511 biphosphonate drug reactive ! biphosphonate drug reactive

2.857. XLMOD:09045 trimethyl orthoacetate

Table 859. Term [XLMOD:09045]

id

XLMOD:09045

name

trimethyl orthoacetate

def

"1,1,1-Trimethoxyethane." [CAS:1445-45-0, PubChem_Compound:15050, ChemSpiderID:14322, ChemicalBookNo:CB5759743, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06511 biphosphonate drug reactive ! biphosphonate drug reactive

2.858. XLMOD:09046 3-(Perfluorooctyl)propylamine

Table 860. Term [XLMOD:09046]

id

XLMOD:09046

name

3-(Perfluorooctyl)propylamine

def

"3-(Perfluorooctyl)propylamine." [CAS:139175-50-1, PubChem_Compound:10743224, ChemSpiderID:8918555, ChemicalBookNo:CB8736444, PMID:22191594]

synonym

"Heptadecafluoroundecylamine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.859. XLMOD:09047 dimethylaminoethanol

Table 861. Term [XLMOD:09047]

id

XLMOD:09047

name

dimethylaminoethanol

def

"Dimethylaminoethanol." [CAS:108-01-0, PubChem_Compound:7902, ChemSpiderID:8488535, ChemicalBookNo:CB6256870, PMID:22191594, PMID:26477276]

synonym

"DMAE" EXACT []

synonym

"Deanol" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.860. XLMOD:09048 4-nitrobenzyl bromide

Table 862. Term [XLMOD:09048]

id

XLMOD:09048

name

4-nitrobenzyl bromide

def

"4-nitrobenzyl bromide." [CAS:100-11-8, PubChem_Compound:66011, ChemSpiderID:59402, ChemicalBookNo:CB5485712, PMID:3394930]

synonym

"4-NBB" EXACT []

synonym

"p-nitrobenzyl bromide" EXACT []

is_a

XLMOD:06020 arylation reagent ! arylation reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00168 benzyl bromide reactive group ! benzyl bromide reactive group

2.861. XLMOD:09049 2,3-pyridinedicarboxylic anhydride

Table 863. Term [XLMOD:09049]

id

XLMOD:09049

name

2,3-pyridinedicarboxylic anhydride

def

"2,3-pyridinedicarboxylic anhydride." [CAS:699-98-9, ChemSpiderID:62889, ChemicalBookNo:CB5268658, PMID:22191594]

synonym

"Furo(3,4-B)Pyridine-5,7-dione" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00166 anhydride ! anhydride

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.862. XLMOD:09050 ethoxyamine hydrochloride

Table 864. Term [XLMOD:09050]

id

XLMOD:09050

name

ethoxyamine hydrochloride

def

"Ethoxyamine hydrochloride." [CAS:3332-29-4, PubChem_Compound:76850, ChemSpiderID:69303, ChemicalBookNo:CB0126027, PMID:22191594]

synonym

"Ethylhydroxylamine hydrochloride" EXACT []

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.863. XLMOD:09051 4-(N,N-Dimethylaminosulfonyl)-7-hydrazino-2,1,3-benzoxadiazole

Table 865. Term [XLMOD:09051]

id

XLMOD:09051

name

4-(N,N-Dimethylaminosulfonyl)-7-hydrazino-2,1,3-benzoxadiazole

def

"4-(N,N-Dimethylaminosulfonyl)-7-hydrazino-2,1,3-benzoxadiazole." [CAS:131467-86-2, PubChem_Compound:131382, ChemSpiderID:116132, ChemicalBookNo:CB8688813, PMID:22191594]

synonym

"DBD-H" EXACT []

synonym

"4-(N,N-Dimethylsulfamoyl)-7-hydrazino-benzofurazan" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.864. XLMOD:09052 1-(5-Fluoro-2,4-dinitrophenyl)-4-methylpiperazine

Table 866. Term [XLMOD:09052]

id

XLMOD:09052

name

1-(5-Fluoro-2,4-dinitrophenyl)-4-methylpiperazine

def

"1-(5-Fluoro-2,4-dinitrophenyl)-4-methylpiperazine." [ChemSpiderID:17350721, PMID:22191594, PMID:26454158]

synonym

"PPZ" EXACT []

synonym

"1-(2,4-dinitro-5-fluorophenyl)-4-methylpiperazine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_fluorophore XLMOD:06104 2,4-dinitrophenyl ! 2,4-dinitrophenyl

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.865. XLMOD:09053 4-nitrobenzoyl chloride

Table 867. Term [XLMOD:09053]

id

XLMOD:09053

name

4-nitrobenzoyl chloride

def

"4-nitrobenzoyl chloride." [CAS:122-04-3, PubChem_Compound:8502, ChemSpiderID:8188, ChemicalBookNo:CB2182076, PMID:22191594]

synonym

"4-NBC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00155 acyl chloride ! acyl chloride

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.866. XLMOD:09054 pyridine-3-sulfonyl chloride

Table 868. Term [XLMOD:09054]

id

XLMOD:09054

name

pyridine-3-sulfonyl chloride

def

"Pyridine-3-sulfonyl chloride." [CAS:16133-25-8, PubChem_Compound:3164136, ChemSpiderID:2415634, ChemicalBookNo:CB5153121, PMID:26477276, PMID:22191594]

synonym

"PSCl" EXACT []

synonym

"chloro-3-pyridylsulfone" EXACT []

synonym

"pyridinium-3-sulfonyl chloride" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00156 sulfonyl chloride ! sulfonyl chloride

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.867. XLMOD:09055 methyl acrylate

Table 869. Term [XLMOD:09055]

id

XLMOD:09055

name

methyl acrylate

def

"Methyl acrylate." [CAS:96-33-3, PubChem_Compound:7294, ChemSpiderID:7022, ChemicalBookNo:CB8669773, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.868. XLMOD:09056 iodoacetic acid

Table 870. Term [XLMOD:09056]

id

XLMOD:09056

name

iodoacetic acid

def

"Iodoacetic acid." [CAS:64-69-7, PubChem_Compound:5240, ChemSpiderID:5050, ChemicalBookNo:CB3854071, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.869. XLMOD:09057 2-Bromo-3'-methoxyacetophenone

Table 871. Term [XLMOD:09057]

id

XLMOD:09057

name

2-Bromo-3'-methoxyacetophenone

def

"2-Bromo-3'-methoxyacetophenone." [CAS:5000-65-7, PubChem_Compound:101294, ChemSpiderID:91526, ChemicalBookNo:CB3100727, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.870. XLMOD:09058 monobromobimane

Table 872. Term [XLMOD:09058]

id

XLMOD:09058

name

monobromobimane

def

"Monobromobimane." [CAS:71418-44-5, PubChem_Compound:114810, ChemSpiderID:102775, ChemicalBookNo:CB0729365, PMID:22191594]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.871. XLMOD:09059 4-bromo-phenacyl-bromide

Table 873. Term [XLMOD:09059]

id

XLMOD:09059

name

4-bromo-phenacyl-bromide

def

"4-bromo-phenacyl-bromide." [CAS:99-73-0, PubChem_Compound:7454, ChemSpiderID:7174, ChemicalBookNo:CB4239093, PMID:22191594]

synonym

"p-BPB" EXACT []

synonym

"p-bromo-phenacyl-bromide" EXACT []

synonym

"2,4'-Dibromoacetophenone" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_fluorophore XLMOD:06111 4-bromophenacyl ! 4-bromophenacyl

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.872. XLMOD:09060 4-bromomethyl-7-methoxycoumarin

Table 874. Term [XLMOD:09060]

id

XLMOD:09060

name

4-bromomethyl-7-methoxycoumarin

def

"4-bromomethyl-7-methoxycoumarin." [CAS:35231-44-8, PubChem_Compound:121894, ChemSpiderID:108742, ChemicalBookNo:CB6345309, PMID:22191594, PMID:15897015, PMID:19525080, PMID:3394930]

synonym

"Br-MMC" EXACT []

synonym

"BrMMC" EXACT []

synonym

"BMC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:06515 nucleoside reactive ! nucleoside reactive

2.873. XLMOD:09061 Cookson type reagent

Table 875. Term [XLMOD:09061]

id

XLMOD:09061

name

Cookson type reagent

def

"4-substituted 1,2,4-triazoline-3,5-dione (TAD)." [PMID:14598004]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.874. XLMOD:09062 4-(4'-dimethylaminophenyl)-1,2,4-triazoline-3,5-dione

Table 876. Term [XLMOD:09062]

id

XLMOD:09062

name

4-(4'-dimethylaminophenyl)-1,2,4-triazoline-3,5-dione

def

"4-(4'-dimethylaminophenyl)-1,2,4-triazoline-3,5-dione." [PMID:24097402]

synonym

"DAPTAD" EXACT []

is_a

XLMOD:09061 Cookson type reagent ! Cookson type reagent

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.875. XLMOD:09063 4-Phenyl-1,2,4-triazole-3,5-dione

Table 877. Term [XLMOD:09063]

id

XLMOD:09063

name

4-Phenyl-1,2,4-triazole-3,5-dione

def

"4-Phenyl-1,2,4-triazole-3,5-dione." [CAS:4233-33-4, ChemSpiderID:70304, ChemicalBookNo:CB3769656, PMID:14598004, PMID:26454158]

synonym

"PTAD" EXACT []

is_a

XLMOD:09061 Cookson type reagent ! Cookson type reagent

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.876. XLMOD:09064 4-[2-(6,7-dimethoxy-4-methyl-3-oxo-3,4-dihydroquinoxalyl)ethyl]-TAD

Table 878. Term [XLMOD:09064]

id

XLMOD:09064

name

4-[2-(6,7-dimethoxy-4-methyl-3-oxo-3,4-dihydroquinoxalyl)ethyl]-TAD

def

"4-[2-(6,7-dimethoxy-4-methyl-3-oxo-3,4-dihydroquinoxalyl)ethyl]-TAD." [CAS:132788-52-4, PubChem_Compound:131554, ChemSpiderID:116261, ChemicalBookNo:CB9453782, PMID:17077543, PMID:27511712]

synonym

"DMEQTAD" EXACT []

is_a

XLMOD:09061 Cookson type reagent ! Cookson type reagent

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.877. XLMOD:09065 4-[4-(6-methoxy-2-benzoxazolyl)phenyl]-1,2,4-triazoline-3,5-dione

Table 879. Term [XLMOD:09065]

id

XLMOD:09065

name

4-[4-(6-methoxy-2-benzoxazolyl)phenyl]-1,2,4-triazoline-3,5-dione

def

"4-[4-(6-methoxy-2-benzoxazolyl)phenyl]-1,2,4-triazoline-3,5-dione." [PMID:15897015, PMID:27511712]

synonym

"MBOTAD" EXACT []

is_a

XLMOD:09061 Cookson type reagent ! Cookson type reagent

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.878. XLMOD:09066 4-(4-Nitrophenyl)-1,2,4-triazole-3,5-dione

Table 880. Term [XLMOD:09066]

id

XLMOD:09066

name

4-(4-Nitrophenyl)-1,2,4-triazole-3,5-dione

def

"4-(4-Nitrophenyl)-1,2,4-triazole-3,5-dione." [CAS:13274-75-4, PubChem_Compound:11368000, ChemSpiderID:9542917, PMID:15897015]

synonym

"NPTAD" EXACT []

is_a

XLMOD:09061 Cookson type reagent ! Cookson type reagent

relationship

has_fluorophore XLMOD:06103 4-nitrophenyl ! 4-nitrophenyl

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.879. XLMOD:09067 edaravone

Table 881. Term [XLMOD:09067]

id

XLMOD:09067

name

edaravone

def

"Edaravone." [CAS:89-25-8, PubChem_Compound:4021, ChemSpiderID:3881, ChemicalBookNo:CB1287462, PMID:20382108]

synonym

"PMP" EXACT []

synonym

"1-phenyl-3-methyl-5-pyrazolone" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06506 carbohydrate reactive ! carbohydrate reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.880. XLMOD:09068 tris(trimethoxyphenyl)phosphonium compound

Table 882. Term [XLMOD:09068]

id

XLMOD:09068

name

tris(trimethoxyphenyl)phosphonium compound

def

"Tris(trimethoxyphenyl)phosphonium compound." [PMID:11857728]

synonym

"TMPP compound" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.881. XLMOD:09069 1S-pentafluorophenyl tris(2,4,6-trimethoxyphenyl)phosphonium acetate bromide

Table 883. Term [XLMOD:09069]

id

XLMOD:09069

name

1S-pentafluorophenyl tris(2,4,6-trimethoxyphenyl)phosphonium acetate bromide

def

"1S-pentafluorophenyl tris(2,4,6-trimethoxyphenyl)phosphonium acetate bromide." [PMID:12590398]

synonym

"TMPP-AcPFP" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:09068 tris(trimethoxyphenyl)phosphonium compound ! tris(trimethoxyphenyl)phosphonium compound

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.882. XLMOD:09070 (4-hydrazino-4-oxobutyl) [tris(2,4,6-trimethoxyphenyl)phosphonium bromide

Table 884. Term [XLMOD:09070]

id

XLMOD:09070

name

(4-hydrazino-4-oxobutyl) [tris(2,4,6-trimethoxyphenyl)phosphonium bromide

def

"(4-hydrazino-4-oxobutyl) [tris(2,4,6-trimethoxyphenyl)phosphonium bromide." [PMID:12590398]

synonym

"TMPP-PrG" EXACT []

is_a

XLMOD:09068 tris(trimethoxyphenyl)phosphonium compound ! tris(trimethoxyphenyl)phosphonium compound

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

2.883. XLMOD:09071 Tris(2,4,6,-trimethoxyphenyl)phosphonium acetic acid

Table 885. Term [XLMOD:09071]

id

XLMOD:09071

name

Tris(2,4,6,-trimethoxyphenyl)phosphonium acetic acid

def

"Tris(2,4,6,-trimethoxyphenyl)phosphonium acetic acid." [PMID:19449318]

synonym

"TMPP-AA" EXACT []

synonym

"TMPP-AcCOOH" EXACT []

is_a

XLMOD:09068 tris(trimethoxyphenyl)phosphonium compound ! tris(trimethoxyphenyl)phosphonium compound

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

relationship

is_reactive_with XLMOD:06516 cholesterol reactive ! cholesterol reactive

2.884. XLMOD:09072 Tris(2,4,6,-trimethoxyphenyl)phosphonium ethanoic acid bromide

Table 886. Term [XLMOD:09072]

id

XLMOD:09072

name

Tris(2,4,6,-trimethoxyphenyl)phosphonium ethanoic acid bromide

def

"Tris(2,4,6,-trimethoxyphenyl)phosphonium ethanoic acid bromide." [PMID:11857728]

synonym

"TMPP-MeCOOH" EXACT []

is_a

XLMOD:09068 tris(trimethoxyphenyl)phosphonium compound ! tris(trimethoxyphenyl)phosphonium compound

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.885. XLMOD:09073 Tris(2,4,6,-trimethoxyphenyl)phosphonium propionic acid bromide

Table 887. Term [XLMOD:09073]

id

XLMOD:09073

name

Tris(2,4,6,-trimethoxyphenyl)phosphonium propionic acid bromide

def

"Tris(2,4,6,-trimethoxyphenyl)phosphonium propionic acid bromide." [PMID:11857728]

synonym

"TMPP-PrCOOH" EXACT []

is_a

XLMOD:09068 tris(trimethoxyphenyl)phosphonium compound ! tris(trimethoxyphenyl)phosphonium compound

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.886. XLMOD:09074 Tris(2,4,6,-trimethoxyphenyl)phosphonium propylamine bromide

Table 888. Term [XLMOD:09074]

id

XLMOD:09074

name

Tris(2,4,6,-trimethoxyphenyl)phosphonium propylamine bromide

def

"Tris(2,4,6,-trimethoxyphenyl)phosphonium propylamine bromide." [PMID:11857728]

synonym

"TMPP-PrNH2" EXACT []

is_a

XLMOD:09068 tris(trimethoxyphenyl)phosphonium compound ! tris(trimethoxyphenyl)phosphonium compound

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.887. XLMOD:09075 benzoic anhydride

Table 889. Term [XLMOD:09075]

id

XLMOD:09075

name

benzoic anhydride

def

"Benzoic anhydride." [CAS:93-97-0, PubChem_Compound:7167, ChemSpiderID:6899, ChemicalBookNo:CB1260942, PMID:15897015]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00166 anhydride ! anhydride

2.888. XLMOD:09076 propionic anhydride

Table 890. Term [XLMOD:09076]

id

XLMOD:09076

name

propionic anhydride

def

"Propionic anhydride." [CAS:123-62-6, PubChem_Compound:31263, ChemSpiderID:29003, ChemicalBookNo:CB7852974, PMID:15897015]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00166 anhydride ! anhydride

2.889. XLMOD:09077 4-toluenesulfonhydrazide

Table 891. Term [XLMOD:09077]

id

XLMOD:09077

name

4-toluenesulfonhydrazide

def

"4-toluenesulfonhydrazide." [CAS:1576-35-8, PubChem_Compound:15303, ChemSpiderID:14566, ChemicalBookNo:CB6156664, PMID:15897015]

synonym

"TSH" EXACT []

synonym

"4-Methylbenzenesulfonhydrazide" EXACT []

synonym

"p-toluenesulfonhydrazide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.890. XLMOD:09078 2-(N,N-dimethyl-amino)ethyl acrylate

Table 892. Term [XLMOD:09078]

id

XLMOD:09078

name

2-(N,N-dimethyl-amino)ethyl acrylate

def

"2-(N,N-dimethyl-amino)ethyl acrylate." [CAS:924-99-2, ChemSpiderID:16195, ChemicalBookNo:CB1468951, PMID:15897015]

synonym

"DMAE acrylate" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.891. XLMOD:09079 1-naphthylisothiocyanate

Table 893. Term [XLMOD:09079]

id

XLMOD:09079

name

1-naphthylisothiocyanate

def

"1-Naphthylisothiocyanate." [CAS:551-06-4, PubChem_Compound:11080, ChemSpiderID:10609, ChemicalBookNo:CB8696418, PMID:15897015]

synonym

"NIT" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

2.892. XLMOD:09080 sulfur trioxide pyridine complex

Table 894. Term [XLMOD:09080]

id

XLMOD:09080

name

sulfur trioxide pyridine complex

def

"Sulfur trioxide pyridine complex." [CAS:26412-87-3, PubChem_Compound:168533, ChemSpiderID:147422, ChemicalBookNo:CB9284694, PMID:15897015]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

2.893. XLMOD:09081 sulfur trioxide N,N-dimethyl-formamide complex

Table 895. Term [XLMOD:09081]

id

XLMOD:09081

name

sulfur trioxide N,N-dimethyl-formamide complex

def

"Sulfur trioxide N,N-dimethyl-formamide complex." [CAS:29584-42-7, PubChem_Compound:169056, ChemicalBookNo:CB0234621, PMID:15897015]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

2.894. XLMOD:09082 2-Acrylamido-2-methyl-1-propanesulfonic acid

Table 896. Term [XLMOD:09082]

id

XLMOD:09082

name

2-Acrylamido-2-methyl-1-propanesulfonic acid

def

"2-acrylamino-2-methyl-propanesulfonic acid." [CAS:15214-89-8, PubChem_Compound:65360, ChemSpiderID:58836, ChemicalBookNo:CB3470952, PMID:15897015]

synonym

"AMDSA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.895. XLMOD:09083 benzyl chloride

Table 897. Term [XLMOD:09083]

id

XLMOD:09083

name

benzyl chloride

def

"Benzyl chloride." [CAS:100-44-7, PubChem_Compound:7503, ChemSpiderID:13840690, ChemicalBookNo:CB1852583, PMID:15897015]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00155 acyl chloride ! acyl chloride

2.896. XLMOD:09084 acetic anhydride

Table 898. Term [XLMOD:09084]

id

XLMOD:09084

name

acetic anhydride

def

"Acetic anhydride." [CAS:108-24-7, PubChem_Compound:7918, ChemSpiderID:7630, PMID:15897015]

synonym

"Ethanoic anhydride" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00166 anhydride ! anhydride

2.897. XLMOD:09085 N-methyl-4-hydrazino-7-nitrobenzofurazan

Table 899. Term [XLMOD:09085]

id

XLMOD:09085

name

N-methyl-4-hydrazino-7-nitrobenzofurazan

def

"N-methyl-4-hydrazino-7-nitrobenzofurazan." [CAS:214147-22-5, PubChem_Compound:3533602, ChemSpiderID:20171264, ChemicalBookNo:CB0111892, PMID:15897015]

synonym

"MNBDH" EXACT []

synonym

"4-(1-Methylhydrazino)-7-nitrobenzofurazan" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.898. XLMOD:09086 boron trifluoride methanol

Table 900. Term [XLMOD:09086]

id

XLMOD:09086

name

boron trifluoride methanol

def

"Boron trifluoride methanol." [CAS:373-57-9, PubChem_Compound:11062313, ChemSpiderID:9237466, ChemicalBookNo:CB1184013, PMID:15897015]

synonym

"BF3-methanol" EXACT []

is_a

XLMOD:06016 boron trifluoride reagent ! boron trifluoride reagent

2.899. XLMOD:09088 (3-(2-nitro-4-trifluoromethylphenyl)aminophenyl)dihydroxyborane

Table 901. Term [XLMOD:09088]

id

XLMOD:09088

name

(3-(2-nitro-4-trifluoromethylphenyl)aminophenyl)dihydroxyborane

def

"(3-(2-nitro-4-trifluoromethylphenyl)aminophenyl)dihydroxyborane." [PMID:15897015]

synonym

"2NFP-APB" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

2.900. XLMOD:09089 2-nitro-4-trifluoromethylphenylhydrazine

Table 902. Term [XLMOD:09089]

id

XLMOD:09089

name

2-nitro-4-trifluoromethylphenylhydrazine

def

"2-nitro-4-trifluoromethylphenylhydrazine." [CAS:1513-50-4, PubChem_Compound:3838097, ChemSpiderID:3063768, ChemicalBookNo:CB5751590, PMID:15897015]

synonym

"NFPH" EXACT []

synonym

"2-NFPH" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.901. XLMOD:09090 4-chloro-7-nitro-2,1,3-benzoxadiazole

Table 903. Term [XLMOD:09090]

id

XLMOD:09090

name

4-chloro-7-nitro-2,1,3-benzoxadiazole

def

"4-chloro-7-nitro-2,1,3-benzoxadiazole." [CAS:10199-89-0, PubChem_Compound:25043, ChemSpiderID:23406, ChemicalBookNo:CB5173637, PMID:15897015]

synonym

"NBDCl" EXACT []

synonym

"4-Chloro-7-nitrobenzofurazan" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00158 halobenzofurazan ! halobenzofurazan

2.902. XLMOD:09091 NBD-PZ Hydrochloride

Table 904. Term [XLMOD:09091]

id

XLMOD:09091

name

NBD-PZ Hydrochloride

def

"NBD-PZ Hydrochloride." [CAS:374730-75-3, PubChem_Compound:71751110, ChemSpiderID:24746629, ChemicalBookNo:CB52558061, PMID:15897015]

synonym

"4-Nitro-7-(1-piperazinyl)-2,1,3-benzoxadiazole hydrochloride" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00158 halobenzofurazan ! halobenzofurazan

2.903. XLMOD:09092 sulfanilic acid

Table 905. Term [XLMOD:09092]

id

XLMOD:09092

name

sulfanilic acid

def

"Sulfanilic acid." [CAS:121-57-3, PubChem_Compound:8479, ChemSpiderID:8166, ChemicalBookNo:CB1489237, PMID:7756703]

synonym

"4-aminobenzenesulphonic acid" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.904. XLMOD:09093 1-chloro-4-methylpyridinium iodide

Table 906. Term [XLMOD:09093]

id

XLMOD:09093

name

1-chloro-4-methylpyridinium iodide

def

"1-chloro-4-methylpyridinium iodide." [ChemSpiderID:29321698, PMID:12621624]

synonym

"CMPI" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.905. XLMOD:09094 3-(2,5-dioxopyrrolidin-1-yl-oxycarbonyl)propyl]trimethylammonium chloride

Table 907. Term [XLMOD:09094]

id

XLMOD:09094

name

3-(2,5-dioxopyrrolidin-1-yl-oxycarbonyl)propyl]trimethylammonium chloride

def

"3-(2,5-dioxopyrrolidin-1-yl-oxycarbonyl)propyl]trimethylammonium chloride." [PMID:22575224]

synonym

"TMAB" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.906. XLMOD:09095 N-methylnicotinic acid N-hydroxysuccinimide ester

Table 908. Term [XLMOD:09095]

id

XLMOD:09095

name

N-methylnicotinic acid N-hydroxysuccinimide ester

def

"N-methylnicotinic acid N-hydroxysuccinimide ester." [PMID:23524938, PMID:21382752]

synonym

"C1-NA-NHS" EXACT []

is_a

XLMOD:09005 NA-NHS ester ! NA-NHS ester

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.907. XLMOD:09096 deuterium labelled N-methylnicotinic acid N-hydroxysuccinimide ester

Table 909. Term [XLMOD:09096]

id

XLMOD:09096

name

deuterium labelled N-methylnicotinic acid N-hydroxysuccinimide ester

def

"Deuterium labelled N-methylnicotinic acid N-hydroxysuccinimide ester." [PMID:23524938, PMID:23628173]

synonym

"C1-NA-NHS-d3" EXACT []

synonym

"C1D3-NA-NHS" EXACT []

is_a

XLMOD:09005 NA-NHS ester ! NA-NHS ester

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.908. XLMOD:09097 N-propylnicotinic acid N-hydroxysuccinimide ester

Table 910. Term [XLMOD:09097]

id

XLMOD:09097

name

N-propylnicotinic acid N-hydroxysuccinimide ester

def

"N-propylnicotinic acid N-hydroxysuccinimide ester." [PMID:23524938]

synonym

"C3-NA-NHS" EXACT []

is_a

XLMOD:09005 NA-NHS ester ! NA-NHS ester

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

2.909. XLMOD:09098 deuterium labelled N-propylnicotinic acid N-hydroxysuccinimide ester

Table 911. Term [XLMOD:09098]

id

XLMOD:09098

name

deuterium labelled N-propylnicotinic acid N-hydroxysuccinimide ester

def

"Deuterium labelled N-propylnicotinic acid N-hydroxysuccinimide ester." [PMID:23524938]

synonym

"C3-NA-NHS-d7" EXACT []

synonym

"C3D7-NA-NHS" EXACT []

is_a

XLMOD:09005 NA-NHS ester ! NA-NHS ester

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

2.910. XLMOD:09099 N-butylnicotinic acid N-hydroxysuccinimide ester

Table 912. Term [XLMOD:09099]

id

XLMOD:09099

name

N-butylnicotinic acid N-hydroxysuccinimide ester

def

"N-butylnicotinic acid N-hydroxysuccinimide ester." [PMID:23524938]

synonym

"C4-NA-NHS" EXACT []

is_a

XLMOD:09005 NA-NHS ester ! NA-NHS ester

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

2.911. XLMOD:09100 deuterium labelled N-butylnicotinic acid N-hydroxysuccinimide ester

Table 913. Term [XLMOD:09100]

id

XLMOD:09100

name

deuterium labelled N-butylnicotinic acid N-hydroxysuccinimide ester

def

"Deuterium labelled N-butylnicotinic acid N-hydroxysuccinimide ester." [PMID:23524938]

synonym

"C4-NA-NHS-d9" EXACT []

synonym

"C4D9-NA-NHS" EXACT []

is_a

XLMOD:09005 NA-NHS ester ! NA-NHS ester

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

2.912. XLMOD:09101 2,4-Dinitrofluorobenzene

Table 914. Term [XLMOD:09101]

id

XLMOD:09101

name

2,4-Dinitrofluorobenzene

def

"2,4-Dinitrofluorobenzene." [CAS:70-34-8, PubChem_Compound:6264, ChemSpiderID:21106037, ChemicalBookNo:CB9442373, PMID:16808485]

synonym

"DNFB" EXACT []

synonym

"FNDB" EXACT []

synonym

"1-Fluoro-2,4-dinitrobenzene" EXACT []

is_a

XLMOD:09243 Sanger type reagent ! Sanger type reagent

relationship

has_reactive_group XLMOD:00145 aryl halide ! aryl halide

2.913. XLMOD:09102 4-N,N,N-trimethylammonioanilylN'-hydroxysuccinimidyl carbamate iodide

Table 915. Term [XLMOD:09102]

id

XLMOD:09102

name

4-N,N,N-trimethylammonioanilylN'-hydroxysuccinimidyl carbamate iodide

def

"4-N,N,N-trimethylammonioanilylN'-hydroxysuccinimidyl carbamate iodide." [PMID:22575224]

synonym

"TAHS" EXACT []

synonym

"p-N,N,N-trimethylammonioanilylN'-hydroxysuccinimidyl carbamate iodide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00164 carabamate ! carbamate

2.914. XLMOD:09103 deuterium labelled p-N,N,N-trimethylammonioanilylN'-hydroxysuccinimidyl carbamate iodide

Table 916. Term [XLMOD:09103]

id

XLMOD:09103

name

deuterium labelled p-N,N,N-trimethylammonioanilylN'-hydroxysuccinimidyl carbamate iodide

def

"Deuterium labelled p-N,N,N-trimethylammonioanilylN'-hydroxysuccinimidyl carbamate iodide." [PMID:22575224]

synonym

"TAHS-d3" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00164 carabamate ! carbamate

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

2.915. XLMOD:09104 4-methylpiperazine acetyl succinimide

Table 917. Term [XLMOD:09104]

id

XLMOD:09104

name

4-methylpiperazine acetyl succinimide

def

"4-methylpiperazine acetyl succinimide." [PMID:22575224]

synonym

"MPAS" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.916. XLMOD:09105 deuterium labelled 4-methylpiperazine acetyl succinimide

Table 918. Term [XLMOD:09105]

id

XLMOD:09105

name

deuterium labelled 4-methylpiperazine acetyl succinimide

def

"Deuterium labelled 4-methylpiperazine acetyl succinimide." [PMID:22575224]

synonym

"MPAS-d3" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.917. XLMOD:09106 4-methylpiperadinebutyryl succinimide

Table 919. Term [XLMOD:09106]

id

XLMOD:09106

name

4-methylpiperadinebutyryl succinimide

def

"4-methylpiperadinebutyryl succinimide." [PMID:22575224]

synonym

"MPBS" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.918. XLMOD:09107 deuterium labelled 4-methylpiperadinebutyryl succinimide

Table 920. Term [XLMOD:09107]

id

XLMOD:09107

name

deuterium labelled 4-methylpiperadinebutyryl succinimide

def

"Deuterium labelled 4-methylpiperadinebutyryl succinimide." [PMID:22575224]

synonym

"MPBS-d3" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.919. XLMOD:09108 dimethylaminobutyryl succinimide

Table 921. Term [XLMOD:09108]

id

XLMOD:09108

name

dimethylaminobutyryl succinimide

def

"Dimethylaminobutyryl succinimide." [PMID:22575224]

synonym

"DMABS" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.920. XLMOD:09109 deuterium labelled dimethylaminobutyryl succinimide

Table 922. Term [XLMOD:09109]

id

XLMOD:09109

name

deuterium labelled dimethylaminobutyryl succinimide

def

"Deuterium labelled dimethylaminobutyryl succinimide." [PMID:22575224]

synonym

"DMABS-d3" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00101 NHS ester ! NHS ester

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.921. XLMOD:09110 13C-dansyl chloride

Table 923. Term [XLMOD:09110]

id

XLMOD:09110

name

13C-dansyl chloride

def

"13C-dansyl chloride." [PMID:22575224]

synonym

"13C DNS-Cl" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

relationship

is_reactive_with XLMOD:06515 nucleoside reactive ! nucleoside reactive

2.922. XLMOD:09111 pentafluorophenyl-activated ester of polyethyleneglycol

Table 924. Term [XLMOD:09111]

id

XLMOD:09111

name

pentafluorophenyl-activated ester of polyethyleneglycol

def

"Pentafluorophenyl-activated ester of polyethyleneglycol." [PMID:18954088]

synonym

"PEG-OPFP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00120 pentafluorophenyl ! pentafluorophenyl

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.923. XLMOD:09112 13C labelled pentafluorophenyl-activated ester of polyethyleneglycol

Table 925. Term [XLMOD:09112]

id

XLMOD:09112

name

13C labelled pentafluorophenyl-activated ester of polyethyleneglycol

def

"13C labelled pentafluorophenyl-activated ester of polyethyleneglycol." [PMID:18954088]

synonym

"13C-PEG-OPFP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00120 pentafluorophenyl ! pentafluorophenyl

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.924. XLMOD:09113 cholamine

Table 926. Term [XLMOD:09113]

id

XLMOD:09113

name

cholamine

def

"Cholamine." [ChemicalBookNo:CB8492922, PMID:22575224]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.925. XLMOD:09114 deuterium labelled cholamine

Table 927. Term [XLMOD:09114]

id

XLMOD:09114

name

deuterium labelled cholamine

def

"Deuterium labelled cholamine." [PMID:22575224]

synonym

"cholamine-d9" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.926. XLMOD:09115 2-bromo-1-methylpyridinium iodide

Table 928. Term [XLMOD:09115]

id

XLMOD:09115

name

2-bromo-1-methylpyridinium iodide

def

"2-bromo-1-methylpyridinium iodide." [CAS:52693-56-8, PubChem_Compound:12233907, ChemSpiderID:11554184, ChemicalBookNo:CB13083603, PMID:22575224]

synonym

"BMP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.927. XLMOD:09116 deuterium labelled 2-bromo-1-methylpyridinium iodide

Table 929. Term [XLMOD:09116]

id

XLMOD:09116

name

deuterium labelled 2-bromo-1-methylpyridinium iodide

def

"Deuterium labelled 2-bromo-1-methylpyridinium iodide." [PMID:22575224]

synonym

"BMP-d3" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.928. XLMOD:09117 3-carbinol-1-methylpyridinium iodide

Table 930. Term [XLMOD:09117]

id

XLMOD:09117

name

3-carbinol-1-methylpyridinium iodide

def

"3-carbinol-1-methylpyridinium iodide." [PMID:22575224]

synonym

"CMP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.929. XLMOD:09118 deuterium labelled 3-carbinol-1-methylpyridinium iodide

Table 931. Term [XLMOD:09118]

id

XLMOD:09118

name

deuterium labelled 3-carbinol-1-methylpyridinium iodide

def

"Deuterium labelled 3-carbinol-1-methylpyridinium iodide." [PMID:22575224]

synonym

"CMP-d3" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.930. XLMOD:09119 4-dimethylaminophenacyl bromide

Table 932. Term [XLMOD:09119]

id

XLMOD:09119

name

4-dimethylaminophenacyl bromide

def

"4-dimethylaminophenacyl bromide." [CAS:37904-72-6, PubChem_Compound:142225, ChemSpiderID:125460, ChemicalBookNo:CB4113692, PMID:22575224]

synonym

"DmPA-Br" EXACT []

synonym

"2-Bromo-1-[4-(dimethylamino)phenyl]ethanone" EXACT []

synonym

"p-dimethylaminophenacyl bromide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_fluorophore XLMOD:06110 phenacyl ! phenacyl

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.931. XLMOD:09120 13C labelled p-dimethylaminophenacyl bromide

Table 933. Term [XLMOD:09120]

id

XLMOD:09120

name

13C labelled p-dimethylaminophenacyl bromide

def

"13C labelled p-dimethylaminophenacyl bromide." [PMID:22575224]

synonym

"13C-DmPA-Br" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_fluorophore XLMOD:06110 phenacyl ! phenacyl

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.932. XLMOD:09121 7-(N,N-dimethylaminosulfonyl)-4-(aminoethyl)piperadino-2,1-3-benzoxadiazole

Table 934. Term [XLMOD:09121]

id

XLMOD:09121

name

7-(N,N-dimethylaminosulfonyl)-4-(aminoethyl)piperadino-2,1-3-benzoxadiazole

def

"7-(N,N-dimethylaminosulfonyl)-4-(aminoethyl)piperadino-2,1-3-benzoxadiazole." [PMID:22575224]

synonym

"DBD-PZ-NH2" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.933. XLMOD:09122 deuterium labelled 7-(N,N-dimethylaminosulfonyl)-4-(aminoethyl)piperadino-2,1-3-benzoxadiazole

Table 935. Term [XLMOD:09122]

id

XLMOD:09122

name

deuterium labelled 7-(N,N-dimethylaminosulfonyl)-4-(aminoethyl)piperadino-2,1-3-benzoxadiazole

def

"Deuterium labelled 7-(N,N-dimethylaminosulfonyl)-4-(aminoethyl)piperadino-2,1-3-benzoxadiazole." [PMID:22575224, PMID:16167303]

synonym

"DBD-PZ-NH2-d6" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.934. XLMOD:09123 7-(N,N-dimethylaminosulfonyl)-4-piperadino-2,1-3-benzoxadiazole

Table 936. Term [XLMOD:09123]

id

XLMOD:09123

name

7-(N,N-dimethylaminosulfonyl)-4-piperadino-2,1-3-benzoxadiazole

def

"7-(N,N-dimethylaminosulfonyl)-4-piperadino-2,1-3-benzoxadiazole." [PMID:22575224]

synonym

"DBD-PZ" EXACT []

synonym

"4-(N,N-dimethylaminosulfonyl)-7-(1-piperazinyl)-2,1,3-benzoxadiazole" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.935. XLMOD:09124 deuterium labelled 7-(N,N-dimethylaminosulfonyl)-4-piperadino-2,1-3-benzoxadiazole

Table 937. Term [XLMOD:09124]

id

XLMOD:09124

name

deuterium labelled 7-(N,N-dimethylaminosulfonyl)-4-piperadino-2,1-3-benzoxadiazole

def

"Deuterium labelled 7-(N,N-dimethylaminosulfonyl)-4-piperadino-2,1-3-benzoxadiazole." [PMID:22575224]

synonym

"DBD-PZ-d6" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.936. XLMOD:09125 deuterium labelled Girard’s reagent P

Table 938. Term [XLMOD:09125]

id

XLMOD:09125

name

deuterium labelled Girard’s reagent P

def

"Deuterium labelled pyridinioacetohydrazide chloride." [PMID:22575224]

synonym

"Gir P-d5" EXACT []

synonym

"GP-d5" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.937. XLMOD:09126 deuterium labelled 2,4-dinitrophenylhydrazine

Table 939. Term [XLMOD:09126]

id

XLMOD:09126

name

deuterium labelled 2,4-dinitrophenylhydrazine

def

"Deuterium labelled 2,4-dinitrophenylhydrazine." [PMID:22575224]

synonym

"DNPH-d3" EXACT []

synonym

"2,4-Dinitro-3,5,6-trideuterophenylhydrazine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

has_fluorophore XLMOD:06104 2,4-dinitrophenyl ! 2,4-dinitrophenyl

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.938. XLMOD:09127 2-Phenylenediamine

Table 940. Term [XLMOD:09127]

id

XLMOD:09127

name

2-Phenylenediamine

def

"2-Phenylenediamine." [CAS:95-54-5, PubChem_Compound:7243, ChemSpiderID:13837582, ChemicalBookNo:CB9854699, PMID:21382752]

synonym

"o-Phenylenediamine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.939. XLMOD:09129 5,5'-Dithio-(bis-2-nitrobenzoic) acid

Table 941. Term [XLMOD:09129]

id

XLMOD:09129

name

5,5'-Dithio-(bis-2-nitrobenzoic) acid

def

"5,5'-Dithio-(bis-2-nitrobenzoic) acid." [CAS:69-78-3, PubChem_Compound:6254, ChemSpiderID:6018, ChemicalBookNo:CB2215444, PMID:21382752]

synonym

"Ellman’s reagent" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.940. XLMOD:09130 4-(Hydroxymercuri)benzoate acid

Table 942. Term [XLMOD:09130]

id

XLMOD:09130

name

4-(Hydroxymercuri)benzoate acid

def

"4-(Hydroxymercuri)benzoate acid." [CAS:138-85-2, PubChem_Compound:23667696, ChemSpiderID:8104477, ChemicalBookNo:CB9350409, PMID:21382752]

synonym

"p-(Hydroxymercuri)benzoate acid" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.941. XLMOD:09131 N-Ethylmaleimide

Table 943. Term [XLMOD:09131]

id

XLMOD:09131

name

N-Ethylmaleimide

def

"N-Ethylmaleimide." [CAS:128-53-0, PubChem_Compound:4362, ChemSpiderID:4209, ChemicalBookNo:CB5748314, PMID:21382752, PMID:29906677]

synonym

"NEM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.942. XLMOD:09132 4-Methylbenzenesulfonyl isocyanate

Table 944. Term [XLMOD:09132]

id

XLMOD:09132

name

4-Methylbenzenesulfonyl isocyanate

def

"4-Methylbenzenesulfonyl isocyanate." [CAS:4083-64-1, PubChem_Compound:77703, ChemSpiderID:70104, ChemicalBookNo:CB8256995, PMID:21382752]

synonym

"p-Toluenesulfonyl isocyanate" EXACT []

synonym

"Tosyl isocyanate" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00124 isocyanate ! isocyanate

2.943. XLMOD:09133 1-(4-lsopropyl) phenyl-3-methyl-5-pyrazolone

Table 945. Term [XLMOD:09133]

id

XLMOD:09133

name

1-(4-lsopropyl) phenyl-3-methyl-5-pyrazolone

def

"1-(4-lsopropyl) phenyl-3-methyl-5-pyrazolone." [PMID:21382752]

synonym

"PMPP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

2.944. XLMOD:09134 2-Sulfobenzoic anhydride

Table 946. Term [XLMOD:09134]

id

XLMOD:09134

name

2-Sulfobenzoic anhydride

def

"2-Sulfobenzoic anhydride." [CAS:81-08-3, PubChem_Compound:65729, ChemSpiderID:59152, ChemicalBookNo:CB4286815, PMID:21382752]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00166 anhydride ! anhydride

2.945. XLMOD:09135 1-pyrenesulfonyl chloride

Table 947. Term [XLMOD:09135]

id

XLMOD:09135

name

1-pyrenesulfonyl chloride

def

"1-pyrenesulfonyl chloride." [CAS:61494-52-8, PubChem_Compound:2762670, ChemSpiderID:2043373, ChemicalBookNo:CB0708281, PMID:21382752]

synonym

"PSC" EXACT []

synonym

"Pyrene-1-sulfonyl chloride" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00156 sulfonyl chloride ! sulfonyl chloride

2.946. XLMOD:09136 2,3-Naphthalenedialdehyde

Table 948. Term [XLMOD:09136]

id

XLMOD:09136

name

2,3-Naphthalenedialdehyde

def

"2,3-Naphthalenedialdehyde." [CAS:7149-49-7, PubChem_Compound:96400, ChemSpiderID:87023, ChemicalBookNo:CB5283316, PMID:21382752]

synonym

"Naphthalene-2,3-dicarbaldehyde" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.947. XLMOD:09137 3-chlorocarbonyl-6,7-dimethoxy-1-methyl-2(1H)-quinoxalinone

Table 949. Term [XLMOD:09137]

id

XLMOD:09137

name

3-chlorocarbonyl-6,7-dimethoxy-1-methyl-2(1H)-quinoxalinone

def

"3-chlorocarbonyl-6,7-dimethoxy-1-methyl-2(1H)-quinoxalinone." [CAS:104077-15-8, PubChem_Compound:147056, ChemSpiderID:129681, ChemicalBookNo:CB6511517, PMID:21382752]

synonym

"DMEQ-COCI" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.948. XLMOD:09138 Fluorescein-5-isothiocyanate

Table 950. Term [XLMOD:09138]

id

XLMOD:09138

name

Fluorescein-5-isothiocyanate

def

"Fluorescein-5-isothiocyanate." [CAS:3326-32-7, PubChem_Compound:18730, ChemSpiderID:17686, ChemicalBookNo:CB0173162, PMID:21382752]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

2.949. XLMOD:09139 2-Chloro-1-methylpyridinium

Table 951. Term [XLMOD:09139]

id

XLMOD:09139

name

2-Chloro-1-methylpyridinium

def

"2-Chloro-1-methylpyridinium." [CAS:45528-84-5, PubChem_Compound:167070, ChemSpiderID:146180, ChemicalBookNo:CB11376592, PMID:21382752]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.950. XLMOD:09140 (5-N-succinimidoxy-5-oxopentyl)triphenylphosphonium bromide

Table 952. Term [XLMOD:09140]

id

XLMOD:09140

name

(5-N-succinimidoxy-5-oxopentyl)triphenylphosphonium bromide

def

"(5-N-succinimidoxy-5-oxopentyl)triphenylphosphonium bromide." [PMID:21382752]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.951. XLMOD:09141 Diethylethoxymethylenemalonate

Table 953. Term [XLMOD:09141]

id

XLMOD:09141

name

Diethylethoxymethylenemalonate

def

"Diethylethoxymethylenemalonate." [CAS:87-13-8, PubChem_Compound:6871, ChemSpiderID:6609, ChemicalBookNo:CB3163908, PMID:21382752, PMID:22889992]

synonym

"DEEMM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.952. XLMOD:09142 4-(dimethylamino)phenyl isothiocyanate

Table 954. Term [XLMOD:09142]

id

XLMOD:09142

name

4-(dimethylamino)phenyl isothiocyanate

def

"4-(dimethylamino)phenyl isothiocyanate." [CAS:2131-64-8, PubChem_Compound:75047, ChemSpiderID:67599, ChemicalBookNo:CB6742874, PMID:21382752]

synonym

"DMAP-NCS" EXACT []

synonym

"p-Dimethylaminophenyl isothiocyanate" EXACT []

synonym

"p-Isothiocyanato-N,N-dimethylaniline" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

2.953. XLMOD:09143 3-Nitrophenyl isothiocyanate

Table 955. Term [XLMOD:09143]

id

XLMOD:09143

name

3-Nitrophenyl isothiocyanate

def

"3-Nitrophenyl isothiocyanate." [CAS:3529-82-6, PubChem_Compound:19050, ChemSpiderID:17985, ChemicalBookNo:CB5235618, PMID:21382752]

synonym

"m-Nitrophenyl isothiocyanate" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

2.954. XLMOD:09144 3-aminopyridyl-N-hydroxysuccinimidylcarbamate

Table 956. Term [XLMOD:09144]

id

XLMOD:09144

name

3-aminopyridyl-N-hydroxysuccinimidylcarbamate

def

"3-aminopyridyl-N-hydroxysuccinimidylcarbamate." [PMID:21382752]

synonym

"APDS" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00164 carabamate ! carbamate

2.955. XLMOD:09145 N-(4-aminomethylphenyl)pyridinium

Table 957. Term [XLMOD:09145]

id

XLMOD:09145

name

N-(4-aminomethylphenyl)pyridinium

def

"N-(4-aminomethylphenyl)pyridinium." [PMID:21382752]

synonym

"AMPP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.956. XLMOD:09146 Cyclohexanedione

Table 958. Term [XLMOD:09146]

id

XLMOD:09146

name

Cyclohexanedione

def

"Cyclohexanedione." [CAS:765-87-7, PubChem_Compound:13006, ChemSpiderID:12465, ChemicalBookNo:CB7854271, PMID:26496130]

synonym

"CHD" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.957. XLMOD:09148 2-fluoro-1-methylpyridium

Table 959. Term [XLMOD:09148]

id

XLMOD:09148

name

2-fluoro-1-methylpyridium

def

"2-fluoro-1-methylpyridium." [PMID:26496130, PMID:26454158]

synonym

"2-FMP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00032 hydroxyl reactive ! hydroxyl reactive

relationship

is_reactive_with XLMOD:06509 phenol reactive ! phenol reactive

2.958. XLMOD:09149 triplex 5-diethylaminonaphthalene-1-sulfonyl chloride

Table 960. Term [XLMOD:09149]

id

XLMOD:09149

name

triplex 5-diethylaminonaphthalene-1-sulfonyl chloride

def

"Triplex 5-diethylaminonaphthalene-1-sulfonyl chloride." [PMID:26496130]

synonym

"DensCl" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00156 sulfonyl chloride ! sulfonyl chloride

2.959. XLMOD:09150 N-(5-fluoro-2,4-dinitrophenyl)-D-leucinamide

Table 961. Term [XLMOD:09150]

id

XLMOD:09150

name

N-(5-fluoro-2,4-dinitrophenyl)-D-leucinamide

def

"N-(5-fluoro-2,4-dinitrophenyl)-D-leucinamide." [PMID:26496130]

synonym

"D-FDLA" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:09244 Marfey type reagent ! Marfey type reagent

relationship

has_fluorophore XLMOD:06104 2,4-dinitrophenyl ! 2,4-dinitrophenyl

2.960. XLMOD:09152 ebselen

Table 962. Term [XLMOD:09152]

id

XLMOD:09152

name

ebselen

def

"Ebselen." [CAS:60940-34-3, PubChem_Compound:3194, ChemSpiderID:3082, ChemicalBookNo:CB5301009, PMID:26496130]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.961. XLMOD:09153 iodoacetamide

Table 963. Term [XLMOD:09153]

id

XLMOD:09153

name

iodoacetamide

def

"Iodoacetamide." [CAS:144-48-9, PubChem_Compound:3727, ChemSpiderID:3596, ChemicalBookNo:CB4760867, PMID:26496130]

synonym

"IAM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.962. XLMOD:09154 isopropylchloroformate

Table 964. Term [XLMOD:09154]

id

XLMOD:09154

name

isopropylchloroformate

def

"Isopropylchloroformate." [CAS:108-23-6, PubChem_Compound:7917, ChemSpiderID:7629, ChemicalBookNo:CB5702693, PMID:26496130]

synonym

"IPCF" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.963. XLMOD:09155 2-Nitrobenzaldehyde

Table 965. Term [XLMOD:09155]

id

XLMOD:09155

name

2-Nitrobenzaldehyde

def

"2-Nitrobenzaldehyde." [CAS:552-89-6, PubChem_Compound:11101, ChemSpiderID:10630, ChemicalBookNo:CB8414184, PMID:26496130]

synonym

"2-NB" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.964. XLMOD:09157 5-N-succinimidoxy-5-oxopentyl)triphenylphosphonium bromide

Table 966. Term [XLMOD:09157]

id

XLMOD:09157

name

5-N-succinimidoxy-5-oxopentyl)triphenylphosphonium bromide

def

"5-N-succinimidoxy-5-oxopentyl)triphenylphosphonium bromide." [PMID:22889992]

synonym

"SPTPP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.965. XLMOD:09158 2,5-dioxopyrrolidin-1-yl N-tri(pyrrolidino)phosphoranylideneamino carbamate

Table 967. Term [XLMOD:09158]

id

XLMOD:09158

name

2,5-dioxopyrrolidin-1-yl N-tri(pyrrolidino)phosphoranylideneamino carbamate

def

"2,5-dioxopyrrolidin-1-yl N-tri(pyrrolidino)phosphoranylideneamino carbamate." [PMID:22889992]

synonym

"FOSF" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00164 carabamate ! carbamate

2.966. XLMOD:09159 2-nitrophenylhydrazine hydrochloride

Table 968. Term [XLMOD:09159]

id

XLMOD:09159

name

2-nitrophenylhydrazine hydrochloride

def

"2-nitrophenylhydrazine hydrochloride." [CAS:56413-75-3, PubChem_Compound:5743520, ChemSpiderID:21306, ChemicalBookNo:CB5875432, PMID:3429573, PMID:10905720]

synonym

"2-NPH-HCl" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.967. XLMOD:09161 phenacyl bromide

Table 969. Term [XLMOD:09161]

id

XLMOD:09161

name

phenacyl bromide

def

"Phenacyl bromide." [CAS:70-11-1, PubChem_Compound:6259, ChemSpiderID:6023, ChemicalBookNo:CB6305185, PMID:3394930]

synonym

"2-Bromoacetophenone" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_fluorophore XLMOD:06110 phenacyl ! phenacyl

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.968. XLMOD:09163 2-(4-nitro-benzyl)-N,N'-diisopropyl-iso-urea

Table 970. Term [XLMOD:09163]

id

XLMOD:09163

name

2-(4-nitro-benzyl)-N,N'-diisopropyl-iso-urea

def

"2-(4-nitro-benzyl)-N,N'-diisopropyl-iso-urea." [PMID:3394930]

synonym

"o-(4-nitro-benzyl)-N,N'-diisopropyl-iso-urea" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.969. XLMOD:09164 3-nitrophenylhydrazine

Table 971. Term [XLMOD:09164]

id

XLMOD:09164

name

3-nitrophenylhydrazine

def

"3-nitrophenylhydrazine." [PMID:23580203]

synonym

"3-NPH" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.970. XLMOD:09165 butyl 1-(pyridin-4-yl) piperidine 4-carboxylate

Table 972. Term [XLMOD:09165]

id

XLMOD:09165

name

butyl 1-(pyridin-4-yl) piperidine 4-carboxylate

def

"Butyl 1-(pyridin-4-yl) piperidine 4-carboxylate." [PMID:23245244]

synonym

"BPPC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.971. XLMOD:09166 4-bromo-N-methylbenzylamine

Table 973. Term [XLMOD:09166]

id

XLMOD:09166

name

4-bromo-N-methylbenzylamine

def

"4-bromo-N-methylbenzylamine." [CAS:699-03-6, PubChem_Compound:485400, ChemSpiderID:425634, ChemicalBookNo:CB3478655, PMID:29213145]

synonym

"4-BNMA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

2.972. XLMOD:09167 N-methyl-2-phenylethanamine

Table 974. Term [XLMOD:09167]

id

XLMOD:09167

name

N-methyl-2-phenylethanamine

def

"N-methyl-2-phenylethanamine." [CAS:589-08-2, PubChem_Compound:11503, ChemSpiderID:11019, ChemicalBookNo:CB6140245, PMID:29213145]

synonym

"MPEA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.973. XLMOD:09168 benzoyl chloride

Table 975. Term [XLMOD:09168]

id

XLMOD:09168

name

benzoyl chloride

def

"Benzoyl chloride." [CAS:98-88-4, PubChem_Compound:7412, ChemSpiderID:7134, ChemicalBookNo:CB8854753, PMID:28660399]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00155 acyl chloride ! acyl chloride

2.974. XLMOD:09169 N-tert-butylmaleimide

Table 976. Term [XLMOD:09169]

id

XLMOD:09169

name

N-tert-butylmaleimide

def

"N-tert-butylmaleimide." [CAS:4144-22-3, PubChem_Compound:643190, ChemSpiderID:558357, ChemicalBookNo:CB4720254, PMID:29906677]

synonym

"NrBM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.975. XLMOD:09170 N-propylmaleimide

Table 977. Term [XLMOD:09170]

id

XLMOD:09170

name

N-propylmaleimide

def

"N-propylmaleimide." [CAS:21746-40-7, PubChem_Compound:89033, ChemSpiderID:80338, ChemicalBookNo:CB9737837, PMID:29906677]

synonym

"NPM" EXACT []

synonym

"1-Propylpyrrole-2,5-dione" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.976. XLMOD:09171 4-hydrazinobenzoic acid

Table 978. Term [XLMOD:09171]

id

XLMOD:09171

name

4-hydrazinobenzoic acid

def

"4-hydrazinobenzoic acid." [CAS:619-67-0, PubChem_Compound:12089, ChemSpiderID:11592, ChemicalBookNo:CB5271632, PMID:29853022]

synonym

"HBA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.977. XLMOD:09172 2-aminoethanethiol

Table 979. Term [XLMOD:09172]

id

XLMOD:09172

name

2-aminoethanethiol

def

"2-aminoethanethiol." [CAS:60-23-1, PubChem_Compound:6058, ChemSpiderID:5834, ChemicalBookNo:CB2223766, PMID:29853022]

synonym

"Cysteamine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.978. XLMOD:09173 2-diphenylacetyl-1,3-indandione-1-hydrazone

Table 980. Term [XLMOD:09173]

id

XLMOD:09173

name

2-diphenylacetyl-1,3-indandione-1-hydrazone

def

"2-diphenylacetyl-1,3-indandione-1-hydrazone." [CAS:5102-79-4, PubChem_Compound:5375071, ChemicalBookNo:CB4455145, PMID:29853022]

synonym

"DAIH" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.979. XLMOD:09174 3-methylbenzothiazolin-2-one hydrazone

Table 981. Term [XLMOD:09174]

id

XLMOD:09174

name

3-methylbenzothiazolin-2-one hydrazone

def

"3-methylbenzothiazolin-2-one hydrazone." [CAS:1128-67-2, PubChem_Compound:5359575, ChemSpiderID:4700314, ChemicalBookNo:CB2663986, PMID:29853022]

synonym

"MBTH" EXACT []

synonym

"(3-Methyl-1,3-benzothiazol-2-ylidene)hydrazine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.980. XLMOD:09175 cyclohexane-1,3-dione

Table 982. Term [XLMOD:09175]

id

XLMOD:09175

name

cyclohexane-1,3-dione

def

"Cyclohexane-1,3-dione." [CAS:504-02-9, PubChem_Compound:10434, ChemSpiderID:10004, ChemicalBookNo:CB8319650, PMID:29853022]

synonym

"Dihydroresorcinol" EXACT []

synonym

"1,3-Cyclohexanedione" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.981. XLMOD:09176 pyroglutamic acid succinimidyl ester

Table 983. Term [XLMOD:09176]

id

XLMOD:09176

name

pyroglutamic acid succinimidyl ester

def

"Pyroglutamic acid succinimidyl ester." [PMID:27582321]

synonym

"PGA-OSu" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.982. XLMOD:09177 2,4,6-trichlorophenylhydrazine

Table 984. Term [XLMOD:09177]

id

XLMOD:09177

name

2,4,6-trichlorophenylhydrazine

def

"2,4,6-trichlorophenylhydrazine." [CAS:5329-12-4, PubChem_Compound:79234, ChemSpiderID:71559, ChemicalBookNo:CB4690892, PMID:29853022]

synonym

"2,4,6-Trichlorophenylhydrazine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.983. XLMOD:09178 O-2,3,4,5,6-(pentafluorobenzyl) hydroxylamine hydrochloride

Table 985. Term [XLMOD:09178]

id

XLMOD:09178

name

O-2,3,4,5,6-(pentafluorobenzyl) hydroxylamine hydrochloride

def

"O-2,3,4,5,6-(pentafluorobenzyl) hydroxylamine hydrochloride." [CAS:57981-02-9, PubChem_Compound:122307, ChemSpiderID:109062, ChemicalBookNo:CB8307815, PMID:29853022]

synonym

"PFBO" EXACT []

synonym

"Florox Reagent" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.984. XLMOD:09179 benzoyl hydrazine

Table 986. Term [XLMOD:09179]

id

XLMOD:09179

name

benzoyl hydrazine

def

"Benzoyl hydrazine." [CAS:613-94-5, PubChem_Compound:11955, ChemSpiderID:11461, ChemicalBookNo:CB2760863, PMID:29853022]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.985. XLMOD:09180 2-Iodoacetanilide

Table 987. Term [XLMOD:09180]

id

XLMOD:09180

name

2-Iodoacetanilide

def

"2-Iodoacetanilide." [CAS:19591-17-4, PubChem_Compound:140559, ChemSpiderID:123972, ChemicalBookNo:CB2169857, PMID:29650481]

synonym

"2-IAN" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.986. XLMOD:09181 N-hydroxy-benzotriazolyl-(S)-naproxen ester

Table 988. Term [XLMOD:09181]

id

XLMOD:09181

name

N-hydroxy-benzotriazolyl-(S)-naproxen ester

def

"N-hydroxy-benzotriazolyl-(S)-naproxen ester." [PMID:29601646]

synonym

"Npx-ester" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06517 histamine reactive ! histamine reactive

2.987. XLMOD:09182 methyl acetimidate

Table 989. Term [XLMOD:09182]

id

XLMOD:09182

name

methyl acetimidate

def

"Methyl acetimidate." [CAS:14777-29-8, PubChem_Compound:26888, ChemSpiderID:10652948, ChemicalBookNo:CB1506534, PMID:23628173]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.988. XLMOD:09183 13C labelled methyl acetimidate

Table 990. Term [XLMOD:09183]

id

XLMOD:09183

name

13C labelled methyl acetimidate

def

"13C labelled methyl acetimidate." [PMID:23628173]

synonym

"13C-methyl acetimidate" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.989. XLMOD:09184 13C labelled formaldehyde

Table 991. Term [XLMOD:09184]

id

XLMOD:09184

name

13C labelled formaldehyde

def

"13C labelled formaldehyde reagent." [PMID:23628173]

synonym

"13C-formaldehyde" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00036 13C labelled ! 13C labelled

relationship

has_reactive_group XLMOD:00116 aldehyde group ! aldehyde

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.990. XLMOD:09185 acetaldehyde

Table 992. Term [XLMOD:09185]

id

XLMOD:09185

name

acetaldehyde

def

"Acetaldehyde." [CAS:75-07-0, PubChem_Compound:177, ChemSpiderID:172, ChemicalBookNo:CB8175809, PMID:23628173]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.991. XLMOD:09186 deuterium labelled acetaldehyde

Table 993. Term [XLMOD:09186]

id

XLMOD:09186

name

deuterium labelled acetaldehyde

def

"Deuterium labelled acetaldehyde." [PMID:23628173]

synonym

"acetaldehyde-d4" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.992. XLMOD:09187 4-(4-methyl-1-piperazyl)-3-nitrobenzoyl azide

Table 994. Term [XLMOD:09187]

id

XLMOD:09187

name

4-(4-methyl-1-piperazyl)-3-nitrobenzoyl azide

def

"4-(4-methyl-1-piperazyl)-3-nitrobenzoyl azide." [PMID:23628173]

synonym

"APZ" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.993. XLMOD:09188 dibenzyl ethoxymethylene malonate

Table 995. Term [XLMOD:09188]

id

XLMOD:09188

name

dibenzyl ethoxymethylene malonate

def

"Dibenzyl ethoxymethylene malonate." [ChemSpiderID:48244742, PMID:26477276]

synonym

"DBEMM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.994. XLMOD:09189 benzyl ethyl ethoxymethylene malonate

Table 996. Term [XLMOD:09189]

id

XLMOD:09189

name

benzyl ethyl ethoxymethylene malonate

def

"Benzyl ethyl ethoxymethylene malonate." [PMID:26477276]

synonym

"EBEMM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.995. XLMOD:09190 diisopropyl hydrogen phosphite

Table 997. Term [XLMOD:09190]

id

XLMOD:09190

name

diisopropyl hydrogen phosphite

def

"Diisopropyl hydrogen phosphite." [CAS:1809-20-7, PubChem_Compound:558181, ChemSpiderID:485223, ChemicalBookNo:CB5671052, PMID:26477276]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.996. XLMOD:09191 2-(2-[7H-dibenzo (a,g)carbazol-7-yl]-ethoxy)ethyl chloroformate

Table 998. Term [XLMOD:09191]

id

XLMOD:09191

name

2-(2-[7H-dibenzo (a,g)carbazol-7-yl]-ethoxy)ethyl chloroformate

def

"2-(2-[7H-dibenzo (a,g)carbazol-7-yl]-ethoxy)ethyl chloroformate." [PMID:26477276]

synonym

"DBCEC" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.997. XLMOD:09192 ethyl chloroformate

Table 999. Term [XLMOD:09192]

id

XLMOD:09192

name

ethyl chloroformate

def

"Ethyl chloroformate." [CAS:541-41-3, PubChem_Compound:10928, ChemSpiderID:10465, PMID:26477276]

synonym

"ECF" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.998. XLMOD:09193 1-bromobutane

Table 1000. Term [XLMOD:09193]

id

XLMOD:09193

name

1-bromobutane

def

"1-bromobutane." [CAS:109-65-9, PubChem_Compound:8002, ChemSpiderID:7711, ChemicalBookNo:CB2852782, PMID:26477276]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.999. XLMOD:09194 2-bromopyridine-5-boronic acid

Table 1001. Term [XLMOD:09194]

id

XLMOD:09194

name

2-bromopyridine-5-boronic acid

def

"2-bromopyridine-5-boronic acid." [CAS:223463-14-7, PubChem_Compound:2762706, ChemSpiderID:2043406, ChemicalBookNo:CB4371649, PMID:26477276]

synonym

"BPBA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00161 boronic acid ! boronic acid

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1000. XLMOD:09195 (3-dimethylaminophenyl)dihydroxyborane

Table 1002. Term [XLMOD:09195]

id

XLMOD:09195

name

(3-dimethylaminophenyl)dihydroxyborane

def

"(3-dimethylaminophenyl)dihydroxyborane." [CAS:178752-79-9, PubChem_Compound:2762527, ChemSpiderID:2043244, ChemicalBookNo:CB1220410, PMID:26477276]

synonym

"DAPB" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1001. XLMOD:09196 1-methylimidazole-2-sulfonyl chloride

Table 1003. Term [XLMOD:09196]

id

XLMOD:09196

name

1-methylimidazole-2-sulfonyl chloride

def

"1-methylimidazole-2-sulfonyl chloride." [CAS:55694-81-0, PubChem_Compound:11658383, ChemSpiderID:9833118, ChemicalBookNo:CB22592929, PMID:26477276]

synonym

"MLDS" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00156 sulfonyl chloride ! sulfonyl chloride

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1002. XLMOD:09198 N-methyl pyridinium-3-sulfonyl chloride

Table 1004. Term [XLMOD:09198]

id

XLMOD:09198

name

N-methyl pyridinium-3-sulfonyl chloride

def

"N-methyl pyridinium-3-sulfonyl chloride." [PMID:26477276]

synonym

"NMPS" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00156 sulfonyl chloride ! sulfonyl chloride

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1003. XLMOD:09199 quaternary aminooxy reagent

Table 1005. Term [XLMOD:09199]

id

XLMOD:09199

name

quaternary aminooxy reagent

def

"Quaternary aminooxy reagent." [PMID:26477276]

synonym

"QAO" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1004. XLMOD:09200 2,4-dimethoxy-6-piperazin-1-yl pyrimidine

Table 1006. Term [XLMOD:09200]

id

XLMOD:09200

name

2,4-dimethoxy-6-piperazin-1-yl pyrimidine

def

"2,4-dimethoxy-6-piperazin-1-yl pyrimidine." [CAS:38539-75-2, PubChem_Compound:18423149, ChemSpiderID:13408232, ChemicalBookNo:CB93096577, PMID:26477276]

synonym

"DMPP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1005. XLMOD:09201 3-pyridylcarbinol

Table 1007. Term [XLMOD:09201]

id

XLMOD:09201

name

3-pyridylcarbinol

def

"3-pyridylcarbinol." [CAS:100-55-0, PubChem_Compound:7510, ChemSpiderID:7229, ChemicalBookNo:CB6384809, PMID:26477276]

synonym

"3-PC" EXACT []

synonym

"Nicotinyl Alcohol" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1006. XLMOD:09202 phenylhydrazine

Table 1008. Term [XLMOD:09202]

id

XLMOD:09202

name

phenylhydrazine

def

"Phenylhydrazine." [CAS:100-63-0, PubChem_Compound:7516, ChemSpiderID:7235, ChemicalBookNo:CB9216819, PMID:26477276]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

relationship

is_reactive_with XLMOD:06519 alpha-keto acid reactive ! alpha-keto acid reactive

2.1007. XLMOD:09203 o-benzylhydroxylamine

Table 1009. Term [XLMOD:09203]

id

XLMOD:09203

name

o-benzylhydroxylamine

def

"O-benzylhydroxylamine." [CAS:622-33-3, PubChem_Compound:102313, ChemSpiderID:92425, ChemicalBookNo:CB6853994, PMID:26477276]

synonym

"O-BHA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06519 alpha-keto acid reactive ! alpha-keto acid reactive

2.1008. XLMOD:09204 o-phenylenediamine

Table 1010. Term [XLMOD:09204]

id

XLMOD:09204

name

o-phenylenediamine

def

"O-phenylenediamine." [CAS:95-54-5, PubChem_Compound:7243, ChemSpiderID:13837582, ChemicalBookNo:CB9854699, PMID:26477276]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06519 alpha-keto acid reactive ! alpha-keto acid reactive

2.1009. XLMOD:09205 benzyl alcohol

Table 1011. Term [XLMOD:09205]

id

XLMOD:09205

name

benzyl alcohol

def

"Benzyl alcohol." [CAS:100-51-6, PubChem_Compound:244, ChemSpiderID:13860335, ChemicalBookNo:CB3852587, PMID:26477276]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06520 citric acid reactive ! citric acid reactive

2.1010. XLMOD:09206 4-hydroxymercuribenzoate

Table 1012. Term [XLMOD:09206]

id

XLMOD:09206

name

4-hydroxymercuribenzoate

def

"4-hydroxymercuribenzoate." [PubChem_Compound:3647458, ChemSpiderID:15605527, PMID:26477276]

synonym

"PHMB" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.1011. XLMOD:09207 4-chloro-3,5-dinitrobenzotrifluoride

Table 1013. Term [XLMOD:09207]

id

XLMOD:09207

name

4-chloro-3,5-dinitrobenzotrifluoride

def

"4-chloro-3,5-dinitrobenzotrifluoride." [CAS:393-75-9, PubChem_Compound:9809, ChemSpiderID:9426, ChemicalBookNo:CB1329205, PMID:26477276]

synonym

"CNBF" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.1012. XLMOD:09208 omega-bromoacetonylquinolinium bromide

Table 1014. Term [XLMOD:09208]

id

XLMOD:09208

name

omega-bromoacetonylquinolinium bromide

def

"Omega-bromoacetonylquinolinium bromide." [PMID:26477276]

synonym

"BQB" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.1013. XLMOD:09209 pentafluorophenylhydrazine

Table 1015. Term [XLMOD:09209]

id

XLMOD:09209

name

pentafluorophenylhydrazine

def

"Pentafluorophenylhydrazine." [CAS:828-73-9, PubChem_Compound:13236, ChemSpiderID:12681, ChemicalBookNo:CB4730404, PMID:26477276]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.1014. XLMOD:09210 7-(diethylamino)coumarin-3-carbohydrazide

Table 1016. Term [XLMOD:09210]

id

XLMOD:09210

name

7-(diethylamino)coumarin-3-carbohydrazide

def

"7-(diethylamino)coumarin-3-carbohydrazide." [CAS:100343-98-4, PubChem_Compound:127564, ChemSpiderID:113172, ChemicalBookNo:CB0751313, PMID:26477276]

synonym

"CHH" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00110 hydrazide ! hydrazide

2.1015. XLMOD:09211 L-Carnosine

Table 1017. Term [XLMOD:09211]

id

XLMOD:09211

name

L-Carnosine

def

"L-Carnosine." [CAS:305-84-0, PubChem_Compound:439224, ChemSpiderID:388363, ChemicalBookNo:CB0433763, PMID:26477276]

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1016. XLMOD:09212 7-fluorobenzo-2-oxa-1,3-diazole-4-sulfonate

Table 1018. Term [XLMOD:09212]

id

XLMOD:09212

name

7-fluorobenzo-2-oxa-1,3-diazole-4-sulfonate

def

"7-fluorobenzo-2-oxa-1,3-diazole-4-sulfonate." [CAS:84806-27-9, PubChem_Compound:2737780, ChemSpiderID:108691, ChemicalBookNo:CB0175393, PMID:27582321]

synonym

"SBD-F" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00165 sulfonate ! sulfonate

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.1017. XLMOD:09213 4-(aminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole

Table 1019. Term [XLMOD:09213]

id

XLMOD:09213

name

4-(aminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole

def

"4-(aminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole." [CAS:91366-65-3, PubChem_Compound:122067, ChemSpiderID:108876, ChemicalBookNo:CB4102238, PMID:27582321]

synonym

"ABD-F" EXACT []

synonym

"7-Fluoro-2,1,3-benzoxadiazole-4-sulfonamide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00158 halobenzofurazan ! halobenzofurazan

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.1018. XLMOD:09214 4-nitro-7-(1-piperazinyl)-2,1,3-benzoxadiazole

Table 1020. Term [XLMOD:09214]

id

XLMOD:09214

name

4-nitro-7-(1-piperazinyl)-2,1,3-benzoxadiazole

def

"4-nitro-7-(1-piperazinyl)-2,1,3-benzoxadiazole." [CAS:139332-66-4, PubChem_Compound:10586684, ChemSpiderID:8762060, ChemicalBookNo:CB1744464, PMID:27582321]

synonym

"NBD-PZ" EXACT []

synonym

"4-nitro-7-piperazino-2,1,3-benzoxadiazole" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1019. XLMOD:09215 4-(aminosulfonyl)-7-(1-piperazinyl)-2,1,3-benzoxadiazole

Table 1021. Term [XLMOD:09215]

id

XLMOD:09215

name

4-(aminosulfonyl)-7-(1-piperazinyl)-2,1,3-benzoxadiazole

def

"4-(aminosulfonyl)-7-(1-piperazinyl)-2,1,3-benzoxadiazole." [ChemSpiderID:32684168, PMID:27582321]

synonym

"ABD-PZ" EXACT []

synonym

"7-(1-Piperazinyl)-2,1,3-benzoxadiazole-4-sulfonamide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1020. XLMOD:09216 4-(3-isothiocyanatopyrrolidin-1-yl)-7-(N,N-dimethylaminosulfonyl)-2,1,3-benzoxadiazole

Table 1022. Term [XLMOD:09216]

id

XLMOD:09216

name

4-(3-isothiocyanatopyrrolidin-1-yl)-7-(N,N-dimethylaminosulfonyl)-2,1,3-benzoxadiazole

def

"4-(3-isothiocyanatopyrrolidin-1-yl)-7-(N,N-dimethylaminosulfonyl)-2,1,3-benzoxadiazole." [ChemSpiderID:3315424, PMID:27582321]

synonym

"DBD-PyNCS" EXACT []

synonym

"7-(3-Isothiocyanato-1-pyrrolidinyl)-N,N-dimethyl-2,1,3-benzoxadiazole-4-sulfonamide" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.1021. XLMOD:09217 4-(N,N-dimethylaminosulfonyl)-7-(2-carboxylpyrrolidine-1-yl)-2,1,3-benzoxadiazole

Table 1023. Term [XLMOD:09217]

id

XLMOD:09217

name

4-(N,N-dimethylaminosulfonyl)-7-(2-carboxylpyrrolidine-1-yl)-2,1,3-benzoxadiazole

def

"4-(N,N-dimethylaminosulfonyl)-7-(2-carboxylpyrrolidine-1-yl)-2,1,3-benzoxadiazole." [PMID:27582321]

synonym

"DBD-Pro" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.1022. XLMOD:09218 4-(N,N-dimethylaminosulfonyl)-7-(2-chroloformylpyrrolidine-1-yl)-2,1,3-benzoxadiazole

Table 1024. Term [XLMOD:09218]

id

XLMOD:09218

name

4-(N,N-dimethylaminosulfonyl)-7-(2-chroloformylpyrrolidine-1-yl)-2,1,3-benzoxadiazole

def

"4-(N,N-dimethylaminosulfonyl)-7-(2-chroloformylpyrrolidine-1-yl)-2,1,3-benzoxadiazole." [PubChem_Compound:192501, PMID:27582321]

synonym

"DBD-ProCOCl" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00158 halobenzofurazan ! halobenzofurazan

2.1023. XLMOD:09219 4-nitro-7-(2-chroloformylpyrrolidine-1-yl)-2,1,3-benzoxadiazole

Table 1025. Term [XLMOD:09219]

id

XLMOD:09219

name

4-nitro-7-(2-chroloformylpyrrolidine-1-yl)-2,1,3-benzoxadiazole

def

"4-nitro-7-(2-chroloformylpyrrolidine-1-yl)-2,1,3-benzoxadiazole." [PMID:27582321]

synonym

"NBD-ProCOCl" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00158 halobenzofurazan ! halobenzofurazan

2.1024. XLMOD:09220 4-(2-carbazoylpyrrolidin-1-yl)-7-(N,N-dimethylaminosulfonyl)-2,1,3-benzoxadiazole

Table 1026. Term [XLMOD:09220]

id

XLMOD:09220

name

4-(2-carbazoylpyrrolidin-1-yl)-7-(N,N-dimethylaminosulfonyl)-2,1,3-benzoxadiazole

def

"4-(2-carbazoylpyrrolidin-1-yl)-7-(N,N-dimethylaminosulfonyl)-2,1,3-benzoxadiazole." [PMID:27582321]

synonym

"DBD-ProCZ" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1025. XLMOD:09221 4-(2-carbazoylpyrrolidin-1-yl)-7-nitro-2,1,3-benzoxadiazole

Table 1027. Term [XLMOD:09221]

id

XLMOD:09221

name

4-(2-carbazoylpyrrolidin-1-yl)-7-nitro-2,1,3-benzoxadiazole

def

"4-(2-carbazoylpyrrolidin-1-yl)-7-nitro-2,1,3-benzoxadiazole." [PMID:27582321]

synonym

"NBD-ProCZ" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1026. XLMOD:09222 4-(N,N-dimethylaminosulfonyl)-7-(3-aminopyrrolidin-1-yl)-2,1,3-benzoxadiazole

Table 1028. Term [XLMOD:09222]

id

XLMOD:09222

name

4-(N,N-dimethylaminosulfonyl)-7-(3-aminopyrrolidin-1-yl)-2,1,3-benzoxadiazole

def

"4-(N,N-dimethylaminosulfonyl)-7-(3-aminopyrrolidin-1-yl)-2,1,3-benzoxadiazole." [ChemSpiderID:4320363, PMID:27582321, PMID:22761132]

synonym

"DBD-APy" EXACT []

synonym

"7-(3-Amino-1-pyrrolidinyl)-N,N-dimethyl-2,1,3-benzoxadiazole-4-sulfonamide" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1027. XLMOD:09223 4-nitro-7-(3-aminopyrrolidin-1-yl)-2,1,3-benzoxadiazole

Table 1029. Term [XLMOD:09223]

id

XLMOD:09223

name

4-nitro-7-(3-aminopyrrolidin-1-yl)-2,1,3-benzoxadiazole

def

"4-nitro-7-(3-aminopyrrolidin-1-yl)-2,1,3-benzoxadiazole." [ChemSpiderID:3633688, PMID:27582321]

synonym

"NBD-APy" EXACT []

synonym

"1-(7-Nitro-2,1,3-benzoxadiazol-4-yl)-3-pyrrolidinamine" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1028. XLMOD:09224 1-(3-Aminopropyl)-3-bromoquinolinium bromide

Table 1030. Term [XLMOD:09224]

id

XLMOD:09224

name

1-(3-Aminopropyl)-3-bromoquinolinium bromide

def

"1-(3-Aminopropyl)-3-bromoquinolinium bromide." [PMID:27582321]

synonym

"APBQ" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1029. XLMOD:09225 (S)-1-(4,6-Dimethoxy-1,3,5-triazin-2-yl)pyrrolidin-3-amine

Table 1031. Term [XLMOD:09225]

id

XLMOD:09225

name

(S)-1-(4,6-Dimethoxy-1,3,5-triazin-2-yl)pyrrolidin-3-amine

def

"(S)-1-(4,6-Dimethoxy-1,3,5-triazin-2-yl)pyrrolidin-3-amine." [PMID:27582321, PMID:26526912]

synonym

"DMT-3(S)-Apy" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1030. XLMOD:09226 (S)-2,5-dioxopyrrolidin-1-yl-1-(4,6-dimethoxy-1,3,5-triazin-2-yl) pyrrolidine-2-carboxylate

Table 1032. Term [XLMOD:09226]

id

XLMOD:09226

name

(S)-2,5-dioxopyrrolidin-1-yl-1-(4,6-dimethoxy-1,3,5-triazin-2-yl) pyrrolidine-2-carboxylate

def

"(S)-2,5-dioxopyrrolidin-1-yl-1-(4,6-dimethoxy-1,3,5-triazin-2-yl) pyrrolidine-2-carboxylate." [PMID:27582321, PMID:26526912]

synonym

"DMT-(S)-Pro-OSu" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! amino reactice

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.1031. XLMOD:09227 ®-1-(4,6-Dimethoxy-1,3,5-triazin-2-yl)pyrrolidin-3-amine

Table 1033. Term [XLMOD:09227]

id

XLMOD:09227

name

®-1-(4,6-Dimethoxy-1,3,5-triazin-2-yl)pyrrolidin-3-amine

def

"®-1-(4,6-Dimethoxy-1,3,5-triazin-2-yl)pyrrolidin-3-amine." [PMID:26526912]

synonym

"DMT-3®-Apy" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1032. XLMOD:09228 ®-2,5-dioxopyrrolidin-1-yl-1-(4,6-dimethoxy-1,3,5-triazin-2-yl) pyrrolidine-2-carboxylate

Table 1034. Term [XLMOD:09228]

id

XLMOD:09228

name

®-2,5-dioxopyrrolidin-1-yl-1-(4,6-dimethoxy-1,3,5-triazin-2-yl) pyrrolidine-2-carboxylate

def

"®-2,5-dioxopyrrolidin-1-yl-1-(4,6-dimethoxy-1,3,5-triazin-2-yl) pyrrolidine-2-carboxylate." [PMID:26526912]

synonym

"DMT-®-Pro-OSu" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! amino reactice

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.1033. XLMOD:09229 (S)-4,6-dimethoxy-N-(pyrrolidin-3-yl)-1,3,5-triazin-2-amine

Table 1035. Term [XLMOD:09229]

id

XLMOD:09229

name

(S)-4,6-dimethoxy-N-(pyrrolidin-3-yl)-1,3,5-triazin-2-amine

def

"(S)-4,6-dimethoxy-N-(pyrrolidin-3-yl)-1,3,5-triazin-2-amine." [PMID:25366977]

synonym

"DMT-1(S)-Apy" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1034. XLMOD:09230 ®-4,6-dimethoxy-N-(pyrrolidin-3-yl)-1,3,5-triazin-2-amine

Table 1036. Term [XLMOD:09230]

id

XLMOD:09230

name

®-4,6-dimethoxy-N-(pyrrolidin-3-yl)-1,3,5-triazin-2-amine

def

"®-4,6-dimethoxy-N-(pyrrolidin-3-yl)-1,3,5-triazin-2-amine." [PMID:25366977]

synonym

"DMT-1®-Apy" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1035. XLMOD:09231 4-Methyl-1,2,4-triazole-3,5-dione

Table 1037. Term [XLMOD:09231]

id

XLMOD:09231

name

4-Methyl-1,2,4-triazole-3,5-dione

def

"4-Methyl-1,2,4-triazole-3,5-dione." [ChemSpiderID:114186, PMID:27511712]

synonym

"MTAD" EXACT []

synonym

"4-Methyl-TAD" EXACT []

is_a

XLMOD:09061 Cookson type reagent ! Cookson type reagent

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.1036. XLMOD:09232 4-(4-dimethylaminophenyl)-1,2,4-triazole-3,5-dione

Table 1038. Term [XLMOD:09232]

id

XLMOD:09232

name

4-(4-dimethylaminophenyl)-1,2,4-triazole-3,5-dione

def

"4-(4-dimethylaminophenyl)-1,2,4-triazole-3,5-dione." [ChemSpiderID:28468701, PMID:27511712]

synonym

"DMAPTAD" EXACT []

is_a

XLMOD:09061 Cookson type reagent ! Cookson type reagent

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.1037. XLMOD:09233 deuterium labelled 4-(4-dimethylaminophenyl)-1,2,4-triazole-3,5-dione

Table 1039. Term [XLMOD:09233]

id

XLMOD:09233

name

deuterium labelled 4-(4-dimethylaminophenyl)-1,2,4-triazole-3,5-dione

def

"Deuterium labelled 4-(4-dimethylaminophenyl)-1,2,4-triazole-3,5-dione." [ChemSpiderID:28468701, PMID:27511712]

synonym

"DMAPTAD-d4" EXACT []

is_a

XLMOD:09061 Cookson type reagent ! Cookson type reagent

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.1038. XLMOD:09234 4-(4-diethylaminophenyl)-1,2,4-triazole-3,5-dione

Table 1040. Term [XLMOD:09234]

id

XLMOD:09234

name

4-(4-diethylaminophenyl)-1,2,4-triazole-3,5-dione

def

"4-(4-diethylaminophenyl)-1,2,4-triazole-3,5-dione." [PMID:27511712]

synonym

"DEAPTAD" EXACT []

is_a

XLMOD:09061 Cookson type reagent ! Cookson type reagent

relationship

is_labelled XLMOD:00010 deuterium labelled ! deuterium labelled

relationship

has_reactive_group XLMOD:00160 TAD ! TAD

2.1039. XLMOD:09235 2-hydrazino-4-trifluoromethylpyrimidine

Table 1041. Term [XLMOD:09235]

id

XLMOD:09235

name

2-hydrazino-4-trifluoromethylpyrimidine

def

"2-hydrazino-4-trifluoromethylpyrimidine." [CAS:197305-97-8, ChemSpiderID:1064766, ChemicalBookNo:CB7444959, PubChem_Compound:1268079, PMID:26454158]

synonym

"HTP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1040. XLMOD:09236 N-methyl-nicotinic acid N-hydroxysuccinimide ester

Table 1042. Term [XLMOD:09236]

id

XLMOD:09236

name

N-methyl-nicotinic acid N-hydroxysuccinimide ester

def

"N-methyl-nicotinic acid N-hydroxysuccinimide ester." [PMID:26454158]

synonym

"MNAHS" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1041. XLMOD:09237 o-(3-trimethylammoniumpropyl)hydroxylamine

Table 1043. Term [XLMOD:09237]

id

XLMOD:09237

name

o-(3-trimethylammoniumpropyl)hydroxylamine

def

"O-(3-trimethylammoniumpropyl)hydroxylamine." [PMID:26454158]

synonym

"TMAPH" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1042. XLMOD:09238 methoxylamine

Table 1044. Term [XLMOD:09238]

id

XLMOD:09238

name

methoxylamine

def

"Methoxylamine." [CAS:67-62-9, PubChem_Compound:4113, ChemSpiderID:3970, ChemicalBookNo:CB4931737, PMID:26454158]

synonym

"OMHA" EXACT []

synonym

"methoxyamine" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1043. XLMOD:09239 acetyl chloride

Table 1045. Term [XLMOD:09239]

id

XLMOD:09239

name

acetyl chloride

def

"Acetyl chloride." [CAS:75-36-5, PubChem_Compound:6367, ChemSpiderID:6127, ChemicalBookNo:CB4485487, PMID:16458590]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00155 acyl chloride ! acyl chloride

2.1044. XLMOD:09240 2,4-dinitrobenzoyl chloride

Table 1046. Term [XLMOD:09240]

id

XLMOD:09240

name

2,4-dinitrobenzoyl chloride

def

"2,4-dinitrobenzoyl chloride." [CAS:20195-22-6, PubChem_Compound:88401, ChemSpiderID:79755, ChemicalBookNo:CB6933038, PMID:17765276]

synonym

"DNBC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00155 acyl chloride ! acyl chloride

2.1045. XLMOD:09241 4-[2-(N,Ndimethylamino)ethylaminosulfonyl]-7-chloro-2,1,3-benzoxadiazole

Table 1047. Term [XLMOD:09241]

id

XLMOD:09241

name

4-[2-(N,Ndimethylamino)ethylaminosulfonyl]-7-chloro-2,1,3-benzoxadiazole

def

"4-[2-(N,Ndimethylamino)ethylaminosulfonyl]-7-chloro-2,1,3-benzoxadiazole." [CAS:664985-43-7, PubChem_Compound:44629802, ChemSpiderID:24589237, ChemicalBookNo:CB9423743, PMID:17590866]

synonym

"DAABD-Cl" EXACT []

synonym

"7-Chloro-N-[2-(dimethylamino)ethyl]-2,1,3-benzoxadiazole-4-sulfonamide" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1046. XLMOD:09242 4-nitrobenzenesulfonyl chloride

Table 1048. Term [XLMOD:09242]

id

XLMOD:09242

name

4-nitrobenzenesulfonyl chloride

def

"4-nitrobenzenesulfonyl chloride." [CAS:98-74-8, PubChem_Compound:7404, ChemSpiderID:7126, ChemicalBookNo:CB7298161, PMID:16609843]

synonym

"4-NBSC" EXACT []

synonym

"Nosyl chloride" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00156 sulfonyl chloride ! sulfonyl chloride

2.1047. XLMOD:09243 Sanger type reagent

Table 1049. Term [XLMOD:09243]

id

XLMOD:09243

name

Sanger type reagent

def

"A LC-MS derivatization reagent containing a fluoro-dinitrobenzene structure." [PSI:XL]

synonym

"Sanger’s reagent" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00145 aryl halide ! aryl halide

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06500 secondary amine reactive ! secondary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.1048. XLMOD:09244 Marfey type reagent

Table 1050. Term [XLMOD:09244]

id

XLMOD:09244

name

Marfey type reagent

def

"A LC-MS derivatization reagent containing a fluoro-dinitrophenyl structure." [PSI:XL]

synonym

"Marfey’s reagent" EXACT []

synonym

"MR" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00013 membrane permeable ! membrane permeable

relationship

has_reactive_group XLMOD:00145 aryl halide ! aryl halide

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06500 secondary amine reactive ! secondary amine reactive

relationship

is_reactive_with XLMOD:06503 amino acid reactive ! amino acid reactive

2.1049. XLMOD:09245 N-(2,4-dinitro-5-fluorophenyl)-L-alaninamide

Table 1051. Term [XLMOD:09245]

id

XLMOD:09245

name

N-(2,4-dinitro-5-fluorophenyl)-L-alaninamide

def

"N-(2,4-dinitro-5-fluorophenyl)-L-alaninamide." [CAS:95713-52-3, PubChem_Compound:5486955, ChemSpiderID:4589152, ChemicalBookNo:CB5413540]

synonym

"L-FDAA" EXACT []

synonym

"1-Fluoro-2,4-dinitrophenyl-5-L-alanine amide" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:09244 Marfey type reagent ! Marfey type reagent

relationship

has_fluorophore XLMOD:06104 2,4-dinitrophenyl ! 2,4-dinitrophenyl

relationship

has_reactive_group XLMOD:00145 aryl halide ! aryl halide

2.1050. XLMOD:09246 N-(2,4-dinitro-5-fluorophenyl)-D-alaninamide

Table 1052. Term [XLMOD:09246]

id

XLMOD:09246

name

N-(2,4-dinitro-5-fluorophenyl)-D-alaninamide

def

"N-(2,4-dinitro-5-fluorophenyl)-D-alaninamide." [CAS:95713-52-3, PubChem_Compound:5486955, ChemSpiderID:4589152, ChemicalBookNo:CB5413540]

synonym

"D-FDAA" EXACT []

synonym

"1-Fluoro-2,4-dinitrophenyl-5-D-alanine amide" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:09244 Marfey type reagent ! Marfey type reagent

relationship

has_fluorophore XLMOD:06104 2,4-dinitrophenyl ! 2,4-dinitrophenyl

relationship

has_reactive_group XLMOD:00145 aryl halide ! aryl halide

2.1051. XLMOD:09247 N-(5-fluoro-2,4-dinitrophenyl)-L-leucinamide

Table 1053. Term [XLMOD:09247]

id

XLMOD:09247

name

N-(5-fluoro-2,4-dinitrophenyl)-L-leucinamide

def

"N-(5-fluoro-2,4-dinitrophenyl)-L-leucinamide." [PMID:26496130]

synonym

"L-FDLA" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:09244 Marfey type reagent ! Marfey type reagent

relationship

has_fluorophore XLMOD:06104 2,4-dinitrophenyl ! 2,4-dinitrophenyl

relationship

has_reactive_group XLMOD:00145 aryl halide ! aryl halide

2.1052. XLMOD:09248 hexyl chloroformate

Table 1054. Term [XLMOD:09248]

id

XLMOD:09248

name

hexyl chloroformate

def

"Hexyl chloroformate." [CAS:6092-54-2, PubChem_Compound:22466, ChemSpiderID:21071, ChemicalBookNo:CB2782111]

synonym

"HCF" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.1053. XLMOD:09249 1,2-Benzo-3,4-dihydrocarbazole-9-ethyl chloroformate

Table 1055. Term [XLMOD:09249]

id

XLMOD:09249

name

1,2-Benzo-3,4-dihydrocarbazole-9-ethyl chloroformate

def

"1,2-Benzo-3,4-dihydrocarbazole-9-ethyl chloroformate." [PMID:18970343]

synonym

"BCEOC" EXACT []

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.1054. XLMOD:09250 (-)-1-(9-fluorenyl)-ethyl chloroformate

Table 1056. Term [XLMOD:09250]

id

XLMOD:09250

name

(-)-1-(9-fluorenyl)-ethyl chloroformate

def

"(-)-1-(9-fluorenyl)-ethyl chloroformate." [PMID:25082527]

synonym

"-FLEC" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.1055. XLMOD:09251 (+)-1-(9-fluorenyl)-ethyl chloroformate

Table 1057. Term [XLMOD:09251]

id

XLMOD:09251

name

(+)-1-(9-fluorenyl)-ethyl chloroformate

def

"(+)-1-(9-fluorenyl)-ethyl chloroformate." [PMID:29785784]

synonym

"+FLEC" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06018 chloroformate reagent ! chloroformate reagent

2.1056. XLMOD:09252 1,2-Benzo-3,4-dihydrocarbazole-9-ethyl-benzenesulfonate

Table 1058. Term [XLMOD:09252]

id

XLMOD:09252

name

1,2-Benzo-3,4-dihydrocarbazole-9-ethyl-benzenesulfonate

def

"1,2-Benzo-3,4-dihydrocarbazole-9-ethyl-benzenesulfonate." [PMID:19525080, PMID:17305246]

synonym

"BDEBS" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00165 sulfonate ! sulfonate

relationship

is_reactive_with XLMOD:06524 bile acid reactive ! bile acid reactive

2.1057. XLMOD:09253 2-(2,3-Naphthalimino)ethyl trifluoromethanesulfonate

Table 1059. Term [XLMOD:09253]

id

XLMOD:09253

name

2-(2,3-Naphthalimino)ethyl trifluoromethanesulfonate

def

"2-(2,3-Naphthalimino)ethyl trifluoromethanesulfonate." [CAS:128651-50-3, ChemSpiderID:11563131, ChemicalBookNo:CB7667550_EN, DOI:10.2116/bunsekikagaku.53.161]

synonym

"NE-OTf" EXACT []

synonym

"2-(2,3-Naphthalimino)ethyl trifluoromethanesulphonate" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00165 sulfonate ! sulfonate

2.1058. XLMOD:09254 4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-N-piperazino-2,1,3-benzoxadiazole

Table 1060. Term [XLMOD:09254]

id

XLMOD:09254

name

4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-N-piperazino-2,1,3-benzoxadiazole

def

"4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-N-piperazino-2,1,3-benzoxadiazole." [PMID:17590866]

synonym

"DAABD-PZ" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1059. XLMOD:09255 4-[4-carbazoylpiperidin-1-yl]-7-[2-(N,N-dimethylamino)ethylaminosulfonyl]-2,1,3-benzoxadiazole

Table 1061. Term [XLMOD:09255]

id

XLMOD:09255

name

4-[4-carbazoylpiperidin-1-yl]-7-[2-(N,N-dimethylamino)ethylaminosulfonyl]-2,1,3-benzoxadiazole

def

"4-[4-carbazoylpiperidin-1-yl]-7-[2-(N,N-dimethylamino)ethylaminosulfonyl]-2,1,3-benzoxadiazole." [PMID:17590866]

synonym

"DAABD-PiCZ" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1060. XLMOD:09256 4-[2-carbazoylpyrrolidin-1-yl]-7-[2-(N,N-dimethylamino)ethylaminosulfonyl]-2,1,3-benzoxadiazole

Table 1062. Term [XLMOD:09256]

id

XLMOD:09256

name

4-[2-carbazoylpyrrolidin-1-yl]-7-[2-(N,N-dimethylamino)ethylaminosulfonyl]-2,1,3-benzoxadiazole

def

"4-[2-carbazoylpyrrolidin-1-yl]-7-[2-(N,N-dimethylamino)ethylaminosulfonyl]-2,1,3-benzoxadiazole." [PMID:17590866]

synonym

"DAABD-ProCZ" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1061. XLMOD:09257 4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-(3-aminopyrrolidin-1-yl)-2,1,3-benzoxadiazole

Table 1063. Term [XLMOD:09257]

id

XLMOD:09257

name

4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-(3-aminopyrrolidin-1-yl)-2,1,3-benzoxadiazole

def

"4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-(3-aminopyrrolidin-1-yl)-2,1,3-benzoxadiazole." [PMID:17590866]

synonym

"DAABD-APy" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1062. XLMOD:09258 4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-N-methylhydrazino-2,1,3-benzoxadiazole

Table 1064. Term [XLMOD:09258]

id

XLMOD:09258

name

4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-N-methylhydrazino-2,1,3-benzoxadiazole

def

"4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-N-methylhydrazino-2,1,3-benzoxadiazole." [PMID:17703478]

synonym

"DAABD-MHz" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1063. XLMOD:09259 4-[2-(N,N-dimethylamino) ethylaminosulfonyl]-7-(2-aminobutylamino)-2,1,3-benzoxadiazole

Table 1065. Term [XLMOD:09259]

id

XLMOD:09259

name

4-[2-(N,N-dimethylamino) ethylaminosulfonyl]-7-(2-aminobutylamino)-2,1,3-benzoxadiazole

def

"4-[2-(N,N-dimethylamino) ethylaminosulfonyl]-7-(2-aminobutylamino)-2,1,3-benzoxadiazole." [PMID:17703478]

synonym

"DAABD-AB" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1064. XLMOD:09260 4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-(2-aminopentylamino)-2,1,3-benzoxadiazole

Table 1066. Term [XLMOD:09260]

id

XLMOD:09260

name

4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-(2-aminopentylamino)-2,1,3-benzoxadiazole

def

"4-[2-(N,N-dimethylamino)ethylaminosulfonyl]-7-(2-aminopentylamino)-2,1,3-benzoxadiazole." [PMID:17703478]

synonym

"DAABD-AP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1065. XLMOD:09261 [4-(4-N-methyl)piperazinosulfonyl]-7-(2-aminoethylamino)-2,1,3-benzoxadiazole

Table 1067. Term [XLMOD:09261]

id

XLMOD:09261

name

[4-(4-N-methyl)piperazinosulfonyl]-7-(2-aminoethylamino)-2,1,3-benzoxadiazole

def

"[4-(4-N-methyl)piperazinosulfonyl]-7-(2-aminoethylamino)-2,1,3-benzoxadiazole." [PMID:17590866]

synonym

"MePzBD-Cl" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1066. XLMOD:09262 [4-(4-N-methyl)-piperazinosulfonyl]-7-chloro-2,1,3-benzoxadiazole

Table 1068. Term [XLMOD:09262]

id

XLMOD:09262

name

[4-(4-N-methyl)-piperazinosulfonyl]-7-chloro-2,1,3-benzoxadiazole

def

"[4-(4-N-methyl)-piperazinosulfonyl]-7-chloro-2,1,3-benzoxadiazole." [PSI:XL]

synonym

"MePzBD-AE" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1067. XLMOD:09263 4-[[(N-hydrazinoformyl)methyl]-N-methyl]amino-7-[N,N-(dimethylamino)sulfonyl]-2,1,3-benzoxadiazole

Table 1069. Term [XLMOD:09263]

id

XLMOD:09263

name

4-[[(N-hydrazinoformyl)methyl]-N-methyl]amino-7-[N,N-(dimethylamino)sulfonyl]-2,1,3-benzoxadiazole

def

"4-[[(N-hydrazinoformyl)methyl]-N-methyl]amino-7-[N,N-(dimethylamino)sulfonyl]-2,1,3-benzoxadiazole." [PMID:21639306]

synonym

"DBD-COHZ" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00157 benzofurazan ! benzofurazan

2.1068. XLMOD:09264 2,4-Dinitro-6-trifluoromethylphenylhydrazine

Table 1070. Term [XLMOD:09264]

id

XLMOD:09264

name

2,4-Dinitro-6-trifluoromethylphenylhydrazine

def

"2,4-Dinitro-6-trifluoromethylphenylhydrazine." [CAS:119-26-6, PubChem_Compound:3772977, ChemSpiderID:3001507, ChemicalBookNo:CB4852908, PMID:12502079]

synonym

"DNFPH" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00159 hydrazine ! hydrazine

2.1069. XLMOD:09266 2-Amino-N,N,N-trimethylethanaminium chloride

Table 1071. Term [XLMOD:09266]

id

XLMOD:09266

name

2-Amino-N,N,N-trimethylethanaminium chloride

def

"2-Amino-N,N,N-trimethylethanaminium chloride." [ChemSpiderID:2340954]

synonym

"CA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

2.1070. XLMOD:09267 4-(1'-cyanoisoindolyl)phenylisothiocyanate

Table 1072. Term [XLMOD:09267]

id

XLMOD:09267

name

4-(1'-cyanoisoindolyl)phenylisothiocyanate

def

"4-(1'-cyanoisoindolyl)phenylisothiocyanate." [PMID:12485718]

synonym

"CIPIC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

2.1071. XLMOD:09268 2,3,4,6-Tetra-O-acetyl-beta-D-glucopyranosyl isothiocyanate

Table 1073. Term [XLMOD:09268]

id

XLMOD:09268

name

2,3,4,6-Tetra-O-acetyl-beta-D-glucopyranosyl isothiocyanate

def

"2,3,4,6-Tetra-O-acetyl-beta-D-glucopyranosyl isothiocyanate." [CAS:14152-97-7, Beilstein:56699, MDL:MFCD00043085, PubChem_Compound:99462, ChemSpiderID:89858, ChemicalBookNo:CB7320022, PMID:19662356]

synonym

"GITC" EXACT []

synonym

"TAGIT" EXACT []

is_a

XLMOD:06009 chiral derivatization reagent ! chiral derivatization reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

2.1072. XLMOD:09269 4-Dimethylaminophenyl isothiocyanate

Table 1074. Term [XLMOD:09269]

id

XLMOD:09269

name

4-Dimethylaminophenyl isothiocyanate

def

"4-Dimethylaminophenyl isothiocyanate." [CAS:2131-64-8, PubChem_Compound:75047, ChemSpiderID:67599, ChemicalBookNo:CB6742874, PMID:23010846]

synonym

"DMAPI" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1073. XLMOD:09270 dimethylaminoazobenzene isothiocyanate

Table 1075. Term [XLMOD:09270]

id

XLMOD:09270

name

dimethylaminoazobenzene isothiocyanate

def

"Dimethylaminoazobenzene isothiocyanate." [CAS:7612-98-8, PubChem_Compound:82084, ChemSpiderID:74082, ChemicalBookNo:74082, PMID:6426344]

synonym

"DABITC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00162 isothiocyanate ! isothiocyanate

2.1074. XLMOD:09272 trimellitic anhydride

Table 1076. Term [XLMOD:09272]

id

XLMOD:09272

name

trimellitic anhydride

def

"Trimellitic anhydride." [CAS:552-30-7, PubChem_Compound:11089, ChemSpiderID:10618, ChemicalBookNo:CB5293056]

synonym

"TMA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00166 anhydride ! anhydride

2.1075. XLMOD:09274 3-bromoactonyltrimethylammonium bromide

Table 1077. Term [XLMOD:09274]

id

XLMOD:09274

name

3-bromoactonyltrimethylammonium bromide

def

"3-bromoactonyltrimethylammonium bromide." [DOI:10.1016/j.trac.2014.03.013]

synonym

"BTA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1076. XLMOD:09275 5,5'-dimethyl-1,3-cyclohexanedione

Table 1078. Term [XLMOD:09275]

id

XLMOD:09275

name

5,5'-dimethyl-1,3-cyclohexanedione

def

"5,5'-dimethyl-1,3-cyclohexanedione." [CAS:126-81-8, PubChem_Compound:31358, ChemSpiderID:29091, ChemicalBookNo:CB1741746]

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.1077. XLMOD:09276 4-(dimethylamino)-benzoic acid

Table 1079. Term [XLMOD:09276]

id

XLMOD:09276

name

4-(dimethylamino)-benzoic acid

def

"4-(dimethylamino)-benzoic acid." [CAS:619-84-1, PubChem_Compound:12092, ChemSpiderID:11595, ChemicalBookNo:CB4190291]

synonym

"DMBA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1078. XLMOD:09277 1,2-dimethylimidazole-4-sulfonyl chloride

Table 1080. Term [XLMOD:09277]

id

XLMOD:09277

name

1,2-dimethylimidazole-4-sulfonyl chloride

def

"1,2-dimethylimidazole-4-sulfonyl chloride." [CAS:137049-02-6, PubChem_Compound:2736256, ChemSpiderID:2017929, ChemicalBookNo:CB3236772]

synonym

"DMISC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00156 sulfonyl chloride ! sulfonyl chloride

2.1079. XLMOD:09278 N-(2-ferroceneethyl)maleimide

Table 1081. Term [XLMOD:09278]

id

XLMOD:09278

name

N-(2-ferroceneethyl)maleimide

def

"N-(2-ferroceneethyl)maleimide." [ChemSpiderID:10158611]

synonym

"FEM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.1080. XLMOD:09279 ferrocenecarboxylic acid-(2-maleimidoyl)ethylamide

Table 1082. Term [XLMOD:09279]

id

XLMOD:09279

name

ferrocenecarboxylic acid-(2-maleimidoyl)ethylamide

def

"Ferrocenecarboxylic acid-(2-maleimidoyl)ethylamide." [DOI:10.1016/j.trac.2014.03.013]

synonym

"FMEA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00106 maleimide ! maleimide

2.1081. XLMOD:09280 heptadecafluoroundecylamine

Table 1083. Term [XLMOD:09280]

id

XLMOD:09280

name

heptadecafluoroundecylamine

def

"Heptadecafluoroundecylamine." [DOI:10.1016/j.trac.2014.03.013]

synonym

"HFUA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06523 sialic acid reactive ! sialic acid reactive

2.1082. XLMOD:09281 4-hydrazino-N,N,N-trimethyl-4-oxobutanaminium iodide

Table 1084. Term [XLMOD:09281]

id

XLMOD:09281

name

4-hydrazino-N,N,N-trimethyl-4-oxobutanaminium iodide

def

"4-hydrazino-N,N,N-trimethyl-4-oxobutanaminium iodide." [DOI:10.1016/j.trac.2014.03.013]

synonym

"HTMOB" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00031 aldehyde reactive ! aldehyde reactive

relationship

is_reactive_with XLMOD:06510 ketone reactive ! ketone reactive

2.1083. XLMOD:09282 3-aminophenylboronic acid

Table 1085. Term [XLMOD:09282]

id

XLMOD:09282

name

3-aminophenylboronic acid

def

"3-aminophenylboronic acid." [CAS:280563-63-5, PubChem_Compound:92269, ChemSpiderID:83303, ChemicalBookNo:CB3357729]

synonym

"m-APBA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00161 boronic acid ! boronic acid

relationship

is_reactive_with XLMOD:06512 steroid reactive ! steroid reactive

2.1084. XLMOD:09283 1,2-naphthoquinone-4-sulfonate

Table 1086. Term [XLMOD:09283]

id

XLMOD:09283

name

1,2-naphthoquinone-4-sulfonate

def

"1,2-naphthoquinone-4-sulfonate." [CAS:2066-93-5, PubChem_Compound:10637, ChemSpiderID:10191, ChemicalBookNo:CB4898119]

synonym

"NQS" EXACT []

synonym

"3,4-dihydro-3,4-dioxonaphthalene-1-sulphonic acid" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00165 sulfonate ! sulfonate

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.1085. XLMOD:09284 2-bromo-4'-chloroacetophenone

Table 1087. Term [XLMOD:09284]

id

XLMOD:09284

name

2-bromo-4'-chloroacetophenone

def

"2-bromo-4'-chloroacetophenone." [CAS:536-38-9, PubChem_Compound:68303, ChemSpiderID:61599, ChemicalBookNo:CB4198611]

synonym

"p-CPB" EXACT []

synonym

"4-Chloro-2'-bromoacetophenone" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00029 sulfhydryl reactive ! sulfhydryl reactive

2.1086. XLMOD:09285 1-pyrenemethylamine

Table 1088. Term [XLMOD:09285]

id

XLMOD:09285

name

1-pyrenemethylamine

def

"1-pyrenemethylamine." [CAS:3786-54-7, PubChem_Compound:2794252, ChemSpiderID:2073158]

synonym

"PMA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1087. XLMOD:09286 succinimidylferrocenyl propionate

Table 1089. Term [XLMOD:09286]

id

XLMOD:09286

name

succinimidylferrocenyl propionate

def

"Succinimidylferrocenyl propionate." [PubChem_Compound:129849850]

synonym

"SFP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.1088. XLMOD:09287 N-succinimidyl-2(3-pyridyl)acetate

Table 1090. Term [XLMOD:09287]

id

XLMOD:09287

name

N-succinimidyl-2(3-pyridyl)acetate

def

"N-succinimidyl-2(3-pyridyl)acetate." [DOI:10.1016/j.trac.2014.03.013]

synonym

"SPA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

2.1089. XLMOD:09288 7-chloro-2,1,3-benzoxadiazole-4-sulfonylaminoethyltrimethylammonium chloride

Table 1091. Term [XLMOD:09288]

id

XLMOD:09288

name

7-chloro-2,1,3-benzoxadiazole-4-sulfonylaminoethyltrimethylammonium chloride

def

"7-chloro-2,1,3-benzoxadiazole-4-sulfonylaminoethyltrimethylammonium chloride." [DOI:10.1016/j.trac.2014.03.013]

synonym

"TAABD-Cl" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:06513 thiol reactive ! thiol reactive

2.1090. XLMOD:09289 1,2-benzo-3,4-dihydrocarbazole-9-p-toluenesulfonate

Table 1092. Term [XLMOD:09289]

id

XLMOD:09289

name

1,2-benzo-3,4-dihydrocarbazole-9-p-toluenesulfonate

def

"1,2-benzo-3,4-dihydrocarbazole-9-p-toluenesulfonate." [PMID:17305246]

synonym

"BDETS" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00165 sulfonate ! sulfonate

relationship

is_reactive_with XLMOD:06524 bile acid reactive ! bile acid reactive

2.1091. XLMOD:09290 tetramethylammonium hydroxide

Table 1093. Term [XLMOD:09290]

id

XLMOD:09290

name

tetramethylammonium hydroxide

def

"Tetramethylammonium hydroxide." [CAS:75-59-2, PubChem_Compound:60966, ChemSpiderID:54928, ChemicalBookNo:CB2854236, PMID:19525080]

synonym

"TMAH" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1092. XLMOD:09291 trimethylsulfonium hydroxide

Table 1094. Term [XLMOD:09291]

id

XLMOD:09291

name

trimethylsulfonium hydroxide

def

"Trimethylsulfonium hydroxide." [CAS:17287-03-5, PubChem_Compound:11105313, ChemSpiderID:9280449, ChemicalBookNo:CB1421127, PMID:19525080]

synonym

"TMSH" EXACT []

is_a

XLMOD:06002 alkylation reagent ! alkylation reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1093. XLMOD:09292 1-[2-(p-toluenesulfonate)-ethyl]-2-phenylimidazole-[4,5-f-]-9,10-phenantrene

Table 1095. Term [XLMOD:09292]

id

XLMOD:09292

name

1-[2-(p-toluenesulfonate)-ethyl]-2-phenylimidazole-[4,5-f-]-9,10-phenantrene

def

"1-[2-(p-toluenesulfonate)-ethyl]-2-phenylimidazole-[4,5-f-]-9,10-phenantrene." [PMID:19525080]

synonym

"TSPP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

2.1094. XLMOD:09293 1-pyrenyldiazomethane

Table 1096. Term [XLMOD:09293]

id

XLMOD:09293

name

1-pyrenyldiazomethane

def

"1-pyrenyldiazomethane." [CAS:78377-23-8, PubChem_Compound:2762674, ChemSpiderID:2043377, ChemicalBookNo:CB1374735, DOI:10.1016/j.trac.2011.05.005]

synonym

"PDAM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

2.1095. XLMOD:09294 4- bromomethyl-6,7-methylenedioxycoumarin

Table 1097. Term [XLMOD:09294]

id

XLMOD:09294

name

4- bromomethyl-6,7-methylenedioxycoumarin

def

"4- bromomethyl-6,7-methylenedioxycoumarin." [CAS:97744-84-8, PubChem_Compound:126818, ChemSpiderID:112631, ChemicalBookNo:CB71326458, PMID:19525080]

synonym

"Br-MDC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1096. XLMOD:09295 9-anthryldiazomethane

Table 1098. Term [XLMOD:09295]

id

XLMOD:09295

name

9-anthryldiazomethane

def

"9-anthryldiazomethane." [CAS:10401-59-9, PubChem_Compound:3035201, ChemSpiderID:2299498, ChemicalBookNo:CB1185515, PMID:19525080]

synonym

"ADAM" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

2.1097. XLMOD:09296 4-bromomethyl-7,8-benzcoumarin

Table 1099. Term [XLMOD:09296]

id

XLMOD:09296

name

4-bromomethyl-7,8-benzcoumarin

def

"4-bromomethyl-7,8-benzcoumarin." [PMID:7866666]

synonym

"BrMBC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

2.1098. XLMOD:09297 4-diazomethyl-7-methoxycoumarin

Table 1100. Term [XLMOD:09297]

id

XLMOD:09297

name

4-diazomethyl-7-methoxycoumarin

def

"4-diazomethyl-7-methoxycoumarin." [CAS:84471-16-9, PubChem_Compound:54478954, PMID:7866666]

synonym

"DMMC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

2.1099. XLMOD:09298 4-bromomethyl-7-acetoxycoumarin

Table 1101. Term [XLMOD:09298]

id

XLMOD:09298

name

4-bromomethyl-7-acetoxycoumarin

def

"4-bromomethyl-7-acetoxycoumarin." [CAS:2747-04-8, PubChem_Compound:188296, ChemSpiderID:163663, ChemicalBookNo:CB3141928, PMID:7866666]

synonym

"BrMAC" EXACT []

synonym

"7-Acetoxy-4-bromomethylcoumarin" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

2.1100. XLMOD:09299 4-bromomethyl-6,7-dimethoxycoumarin

Table 1102. Term [XLMOD:09299]

id

XLMOD:09299

name

4-bromomethyl-6,7-dimethoxycoumarin

def

"4-bromomethyl-6,7-dimethoxycoumarin." [CAS:88404-25-5, PubChem_Compound:128870, ChemSpiderID:114199, ChemicalBookNo:CB8200312, PMID:7866666]

synonym

"BrDMC" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

2.1101. XLMOD:09300 N-(1-naphthyl)ethylene diamine dihydrochloride

Table 1103. Term [XLMOD:09300]

id

XLMOD:09300

name

N-(1-naphthyl)ethylene diamine dihydrochloride

def

"N-(1-naphthyl)ethylene diamine dihydrochloride." [CAS:1465-25-4, PubChem_Compound:15106, ChemSpiderID:14378, ChemicalBookNo:CB4853112, PMID:19525080]

synonym

"NEDA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

2.1102. XLMOD:09301 9-aminophenanthrene

Table 1104. Term [XLMOD:09301]

id

XLMOD:09301

name

9-aminophenanthrene

def

"9-aminophenanthrene." [CAS:947-73-9, PubChem_Compound:13695, ChemSpiderID:13102, ChemicalBookNo:CB2175009, PMID:6707158]

synonym

"9-AP" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

2.1103. XLMOD:09302 2-[p-(5,6-Methylenedioxy-2H-benzotriazol-2-yl)]phenethylamine

Table 1105. Term [XLMOD:09302]

id

XLMOD:09302

name

2-[p-(5,6-Methylenedioxy-2H-benzotriazol-2-yl)]phenethylamine

def

"2-[p-(5,6-Methylenedioxy-2H-benzotriazol-2-yl)]phenethylamine." [PMID:19525080]

synonym

"MBPA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_property XLMOD:00015 fluorescent ! fluorescent

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

2.1104. XLMOD:09303 succinimidyloxycarbonylmethyl tris(2,4,6-trimethoxyphenyl)phosphonium bromide

Table 1106. Term [XLMOD:09303]

id

XLMOD:09303

name

succinimidyloxycarbonylmethyl tris(2,4,6-trimethoxyphenyl)phosphonium bromide

def

"Succinimidyloxycarbonylmethyl tris(2,4,6-trimethoxyphenyl)phosphonium bromide." [ChemSpiderID:24769591, PMID:20533316]

synonym

"TMPP-Ac-OSu" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1105. XLMOD:09304 9-(hydroxymethyl)anthracene

Table 1107. Term [XLMOD:09304]

id

XLMOD:09304

name

9-(hydroxymethyl)anthracene

def

"9-(hydroxymethyl)anthracene." [CAS:1468-95-7, PubChem_Compound:73848, ChemSpiderID:66482, ChemicalBookNo:CB1205101, PMID:20533316]

synonym

"HMA" EXACT []

synonym

"9-Anthracenemethanol" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1106. XLMOD:09305 5-dimethylamino-1-naphthalenesulfonyl aminoethanol

Table 1108. Term [XLMOD:09305]

id

XLMOD:09305

name

5-dimethylamino-1-naphthalenesulfonyl aminoethanol

def

"5-dimethylamino-1-naphthalenesulfonyl aminoethanol." [PMID:20533316]

synonym

"DNS-AE" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1107. XLMOD:09306 2-(anthracene-2,3-dicarboximdo)ethyl-trifluoromethanesulfonate

Table 1109. Term [XLMOD:09306]

id

XLMOD:09306

name

2-(anthracene-2,3-dicarboximdo)ethyl-trifluoromethanesulfonate

def

"2-(anthracene-2,3-dicarboximdo)ethyl-trifluoromethanesulfonate." [PMID:19525080]

synonym

"AE-OTf" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00165 sulfonate ! sulfonate

2.1108. XLMOD:09307 2-(2-naphthoxy)ethyl-2-(piperidino)ethanesulfonate

Table 1110. Term [XLMOD:09307]

id

XLMOD:09307

name

2-(2-naphthoxy)ethyl-2-(piperidino)ethanesulfonate

def

"2-(2-naphthoxy)ethyl-2-(piperidino)ethanesulfonate." [ChemSpiderID:67166452, PMID:19525080]

synonym

"NOEPES" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00165 sulfonate ! sulfonate

2.1109. XLMOD:09308 N-(4-Amidobutyl)-N-ethylisoluminol

Table 1111. Term [XLMOD:09308]

id

XLMOD:09308

name

N-(4-Amidobutyl)-N-ethylisoluminol

def

"N-(4-Amidobutyl)-N-ethylisoluminol." [CAS:66612-29-1, PubChem_Compound:196441, ChemSpiderID:170196, ChemicalBookNo:CB8393526, PMID:19525080]

synonym

"ABEI" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1110. XLMOD:09309 6-[N-(4-aminobutyl)methylamino]-2,3-dihydro-1,4-phthalazinedione

Table 1112. Term [XLMOD:09309]

id

XLMOD:09309

name

6-[N-(4-aminobutyl)methylamino]-2,3-dihydro-1,4-phthalazinedione

def

"6-[N-(4-aminobutyl)methylamino]-2,3-dihydro-1,4-phthalazinedione." [PMID:19525080]

synonym

"ABMI" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1111. XLMOD:09310 6-[N-(3-propionohydrazino)thioureido]benzo[g]-phthalazine-1,4-(2H,3H)-dione

Table 1113. Term [XLMOD:09310]

id

XLMOD:09310

name

6-[N-(3-propionohydrazino)thioureido]benzo[g]-phthalazine-1,4-(2H,3H)-dione

def

"6-[N-(3-propionohydrazino)thioureido]benzo[g]-phthalazine-1,4-(2H,3H)-dione." [PMID:19525080]

synonym

"PRBO" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1112. XLMOD:09311 triethylamine

Table 1114. Term [XLMOD:09311]

id

XLMOD:09311

name

triethylamine

def

"Triethylamine." [CAS:121-44-8, PubChem_Compound:8471, ChemSpiderID:8158, ChemicalBookNo:CB5355941]

synonym

"TEA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1113. XLMOD:09312 trifluoroacetic acid

Table 1115. Term [XLMOD:09312]

id

XLMOD:09312

name

trifluoroacetic acid

def

"Trifluoroacetic acid." [CAS:76-05-1, PubChem_Compound:6422, ChemSpiderID:10239201, ChemicalBookNo:CB5127175]

synonym

"TFA" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

2.1114. XLMOD:09313 p-Bromophenacylate

Table 1116. Term [XLMOD:09313]

id

XLMOD:09313

name

p-Bromophenacylate

def

"4-Bromophenacylate." [PSI:XL]

synonym

"Phenacyl-8" EXACT []

is_a

XLMOD:06004 acylation reagent ! acylation reagent

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_fluorophore XLMOD:06111 4-bromophenacyl ! 4-bromophenacyl

relationship

is_reactive_with XLMOD:00030 carboxyl reactive ! carboxyl reactive

2.1115. XLMOD:09314 Dabsyl chloride

Table 1117. Term [XLMOD:09314]

id

XLMOD:09314

name

Dabsyl chloride

def

"Dabsyl chloride." [CAS:56512-49-3, PubChem_Compound:91660, Beilstein:3064095, MDL:MFCD00007444, ChemSpiderID:82763, ChemicalBookNo:CB3699737]

synonym

"DAB-Cl" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

has_reactive_group XLMOD:00133 amine reactive group ! amine reactive group

2.1116. XLMOD:09315 2,2-dihydroxyindane-1,3-dione

Table 1118. Term [XLMOD:09315]

id

XLMOD:09315

name

2,2-dihydroxyindane-1,3-dione

def

"2,2-dihydroxyindane-1,3-dione." [CAS:485-47-2, PubChem_Compound:10236, ChemSpiderID:9819, ChemicalBookNo:CB1337916]

synonym

"Ninhydrin" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive

relationship

is_reactive_with XLMOD:06500 secondary amine reactive ! secondary amine reactive

2.1117. XLMOD:09316 2,4,6-trinitrobenzenesulfonic acid

Table 1119. Term [XLMOD:09316]

id

XLMOD:09316

name

2,4,6-trinitrobenzenesulfonic acid

def

"2,4,6-trinitrobenzenesulfonic acid." [CAS:2508-19-2, PubChem_Compound:11045, ChemSpiderID:10577, ChemicalBookNo:CB3737855]

synonym

"TNBSA" EXACT []

synonym

"Picrylsulfonic acid" EXACT []

is_a

XLMOD:06010 LCMS derivatization reagent ! LCMS derivatization reagent

relationship

is_reactive_with XLMOD:00028 primary amine reactive ! primary amine reactive